메뉴 건너뛰기




Volumn 195, Issue 2, 1998, Pages 233-244

Slowly reverting enzyme inactivation: A mechanism for generating long-lived damped oscillations

Author keywords

[No Author keywords available]

Indexed keywords

ENZYME; RIBULOSEBISPHOSPHATE CARBOXYLASE;

EID: 0032556477     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1006/jtbi.1998.0788     Document Type: Article
Times cited : (27)

References (53)
  • 1
    • 0015502072 scopus 로고
    • Transients and cooperativity - A slow transition model for relating transients and cooperative kinetics of enzymes
    • AINSLIE, JR., G. R., SHILL, J. P. & NEET, K. E. (1972). Transients and cooperativity - a slow transition model for relating transients and cooperative kinetics of enzymes. J. Biol. Chem. 247, 7088-7096.
    • (1972) J. Biol. Chem. , vol.247 , pp. 7088-7096
    • Ainslie G.R., Jr.1    Shill, J.P.2    Neet, K.E.3
  • 3
    • 0010366517 scopus 로고
    • Rat-liver glucokinase as a mnemonical enzyme
    • (Ricard, J. & Cornish-Bowden, A., eds) New York: Plenum
    • CORNISH-BOWDEN, A., GREGORIOU, M. & POLLARD-KNIGHT, D. (1983). Rat-liver glucokinase as a mnemonical enzyme. In: Dynamics of Biochemical Systems (Ricard, J. & Cornish-Bowden, A., eds) pp. 29-41. New York: Plenum.
    • (1983) Dynamics of Biochemical Systems , pp. 29-41
    • Cornish-Bowden, A.1    Gregoriou, M.2    Pollard-Knight, D.3
  • 4
    • 0014279706 scopus 로고
    • Transient phase kinetics of enzyme reactions
    • DARVEY, I. G. (1968). Transient phase kinetics of enzyme reactions. J. theor. Biol. 19, 215-231.
    • (1968) J. Theor. Biol. , vol.19 , pp. 215-231
    • Darvey, I.G.1
  • 5
    • 0010320577 scopus 로고
    • Oscillations glycolytiques: Modélisation d'un système minimum à partir des données physiologiques et moléculaires
    • (Delattre, P. & Thellier, M., eds) Paris: Maloine
    • DEMONGEOT, J. & SEYDOUX, F. J. (1979). Oscillations glycolytiques: Modélisation d'un système minimum à partir des données physiologiques et moléculaires. In: Élaboration et Justification des Modèles (Delattre, P. & Thellier, M., eds) Vol. 2, pp. 519-534. Paris: Maloine.
    • (1979) Élaboration et Justification des Modèles , vol.2 , pp. 519-534
    • Demongeot, J.1    Seydoux, F.J.2
  • 6
    • 0010319870 scopus 로고
    • Global attractors and global stability for closed chemical systems
    • FERNÁNDEZ, A. & SINANOǦLU, O. (1984). Global attractors and global stability for closed chemical systems. J. Math. Phys. 25, 406-409.
    • (1984) J. Math. Phys. , vol.25 , pp. 406-409
    • Fernández, A.1    Sinanoǧlu, O.2
  • 7
    • 0001034113 scopus 로고
    • The steady state and equilibrium approximations: A geometrical picture
    • FRASER, S. J. (1988). The steady state and equilibrium approximations: a geometrical picture. J. Chem. Phys. 88, 4732-4738.
    • (1988) J. Chem. Phys. , vol.88 , pp. 4732-4738
    • Fraser, S.J.1
  • 8
    • 0000663184 scopus 로고
    • Phase-plane geometries in enzyme kinetics
    • FRASER, S. J. & ROUSSEL, M. R. (1994). Phase-plane geometries in enzyme kinetics. Can. J. Chem. 72, 800-812.
    • (1994) Can. J. Chem. , vol.72 , pp. 800-812
    • Fraser, S.J.1    Roussel, M.R.2
  • 10
    • 0014940726 scopus 로고
    • Kinetic aspects of regulation of metabolic processes - The hysteretic enzyme concept
    • FRIEDEN, C. (1970). Kinetic aspects of regulation of metabolic processes - the hysteretic enzyme concept. J. Biol. Chem. 245, 5788-5799.
    • (1970) J. Biol. Chem. , vol.245 , pp. 5788-5799
    • Frieden, C.1
  • 11
    • 0018401599 scopus 로고
    • Slow transitions and hysteretic behavior in enzymes
    • FRIEDEN, C. (1979). Slow transitions and hysteretic behavior in enzymes. Annu. Rev. Biochem. 48, 471-489.
    • (1979) Annu. Rev. Biochem. , vol.48 , pp. 471-489
    • Frieden, C.1
  • 13
    • 0023049002 scopus 로고
    • Oscillatory response of photosynthesis in leaves to environmental perturbations: A mathematical model
    • GIERSCH, C. (1986). Oscillatory response of photosynthesis in leaves to environmental perturbations: a mathematical model. Arch. Biochem. Biophys. 245, 263-270.
    • (1986) Arch. Biochem. Biophys. , vol.245 , pp. 263-270
    • Giersch, C.1
  • 16
    • 0032492635 scopus 로고    scopus 로고
    • The effect of slow allosteric transitions in a simple biochemical oscillator model
    • HUNDING, A. & KAERN, M. (1998). The effect of slow allosteric transitions in a simple biochemical oscillator model. J. theor. Biol. 191, 309-322.
    • (1998) J. Theor. Biol. , vol.191 , pp. 309-322
    • Hunding, A.1    Kaern, M.2
  • 18
    • 0010319871 scopus 로고
    • Kinetic model for (damped) oscillations of transthylakoid pH in plants
    • KOCKS, P. & ROSS, J. (1995). Kinetic model for (damped) oscillations of transthylakoid pH in plants. J. Phys. Chem. 99, 16490-16497.
    • (1995) J. Phys. Chem. , vol.99 , pp. 16490-16497
    • Kocks, P.1    Ross, J.2
  • 19
    • 0017196750 scopus 로고
    • The theoretical analysis of kinetic behaviour of "hysteretic" allosteric enzymes. I. The kinetic manifestations of slow conformational change of an oligomeric enzyme in the Monod, Wyman and Changeux model
    • KURGANOV, B. I., DOROZHKO, A. I., KAGAN, Z. S. & YAKOVLEV, V. A. (1976). The theoretical analysis of kinetic behaviour of "hysteretic" allosteric enzymes. I. The kinetic manifestations of slow conformational change of an oligomeric enzyme in the Monod, Wyman and Changeux model. J. theor. Biol. 60, 247-269.
    • (1976) J. Theor. Biol. , vol.60 , pp. 247-269
    • Kurganov, B.I.1    Dorozhko, A.I.2    Kagan, Z.S.3    Yakovlev, V.A.4
  • 20
    • 0000395061 scopus 로고
    • A mathematical model of the carbon metabolism in photosynthesis. Difficulties in explaining oscillations by fructose 2,6-bisphosphate regulation
    • LAISK, A., EICHELMANN, H., OJA, V., EATHERALL, A. & WALKER, D. A. (1989). A mathematical model of the carbon metabolism in photosynthesis. Difficulties in explaining oscillations by fructose 2,6-bisphosphate regulation. Proc. R. Soc. London B 237, 389-415.
    • (1989) Proc. R. Soc. London B , vol.237 , pp. 389-415
    • Laisk, A.1    Eichelmann, H.2    Oja, V.3    Eatherall, A.4    Walker, D.A.5
  • 21
    • 0000936153 scopus 로고
    • Oscillations in photosynthesis are initiated and supported by imbalances in the supply of ATP and NADPH to the Calvin cycle
    • LAISK, A., SIEBKE, K., GERST, U., EICHELMANN, H., OJA, V. & HEBER, U. (1991). Oscillations in photosynthesis are initiated and supported by imbalances in the supply of ATP and NADPH to the Calvin cycle. Planta 185, 554-562.
    • (1991) Planta , vol.185 , pp. 554-562
    • Laisk, A.1    Siebke, K.2    Gerst, U.3    Eichelmann, H.4    Oja, V.5    Heber, U.6
  • 22
    • 0001349267 scopus 로고
    • Control of phosphate turnover as a rate-limiting factor and possible cause of oscillations in photosynthesis: A mathematical model
    • LAISK, A. & WALKER, D. A. (1986). Control of phosphate turnover as a rate-limiting factor and possible cause of oscillations in photosynthesis: a mathematical model. Proc. R. Soc. London B 227, 281-302.
    • (1986) Proc. R. Soc. London B , vol.227 , pp. 281-302
    • Laisk, A.1    Walker, D.A.2
  • 24
    • 0016298437 scopus 로고
    • Regulatory behavior of monomeric enzymes - 2. A wheat-germ hexokinase as a mnemonical enzyme
    • MEUNIER, J.-C., BUC, J., NAVARRO, A. & RICARD, J. (1974). Regulatory behavior of monomeric enzymes - 2. A wheat-germ hexokinase as a mnemonical enzyme. Eur. J. Biochem. 49, 209-223.
    • (1974) Eur. J. Biochem. , vol.49 , pp. 209-223
    • Meunier, J.-C.1    Buc, J.2    Navarro, A.3    Ricard, J.4
  • 26
    • 84947537841 scopus 로고
    • Hysteretic enzymes, slow inhibition, slow activation, and slow membrane binding
    • (Ricard, J. & Cornish-Bowden, A. eds) New York: Plenum
    • NEET, K. E., OHNING, G. V. & WOODRUFF, N. R. (1983). Hysteretic enzymes, slow inhibition, slow activation, and slow membrane binding. In: Dynamics of Biochemical Systems (Ricard, J. & Cornish-Bowden, A. eds) pp. 3-28. New York: Plenum.
    • (1983) Dynamics of Biochemical Systems , pp. 3-28
    • Neet, K.E.1    Ohning, G.V.2    Woodruff, N.R.3
  • 27
    • 0030893571 scopus 로고    scopus 로고
    • A new class of biochemical oscillator models based on competitive binding
    • NGO, L. G. & ROUSSEL, M. R. (1997). A new class of biochemical oscillator models based on competitive binding. Eur. J. Biochem. 245, 182-190.
    • (1997) Eur. J. Biochem. , vol.245 , pp. 182-190
    • Ngo, L.G.1    Roussel, M.R.2
  • 28
    • 0000917522 scopus 로고
    • Geometrical picture of reaction in enzyme kinetics
    • NGUYEN, A. H. & FRASER, S. J. (1989). Geometrical picture of reaction in enzyme kinetics. J. Chem. Phys. 91, 186-193.
    • (1989) J. Chem. Phys. , vol.91 , pp. 186-193
    • Nguyen, A.H.1    Fraser, S.J.2
  • 29
    • 0000622817 scopus 로고
    • Simple oscillations in photosynthesis of higher plants
    • OGAWA, T. (1982). Simple oscillations in photosynthesis of higher plants. Biochim. Biophys. Acta 681, 103-109.
    • (1982) Biochim. Biophys. Acta , vol.681 , pp. 103-109
    • Ogawa, T.1
  • 30
    • 0010366091 scopus 로고
    • Theory of the transient phase in kinetics, with special reference to enzyme systems - II. The case of two enzyme-substrate complexes
    • OUELLET, L. & LAIDLER, K. J. (1956). Theory of the transient phase in kinetics, with special reference to enzyme systems - II. The case of two enzyme-substrate complexes. Can. J. Chem. 34, 146-150.
    • (1956) Can. J. Chem. , vol.34 , pp. 146-150
    • Ouellet, L.1    Laidler, K.J.2
  • 31
    • 0024288428 scopus 로고
    • A mathematical model of the Calvin photosynthesis cycle
    • PETTERSSON, G. & RYDE-PETTERSSON, U. (1988). A mathematical model of the Calvin photosynthesis cycle. Eur. J. Biochem. 175, 661-672.
    • (1988) Eur. J. Biochem. , vol.175 , pp. 661-672
    • Pettersson, G.1    Ryde-Pettersson, U.2
  • 32
    • 0023049749 scopus 로고
    • An upper limit to the active site concentration of ribulose bisphosphate carboxylase in chloroplasts
    • PICKERSGILL, R. W. (1986). An upper limit to the active site concentration of ribulose bisphosphate carboxylase in chloroplasts. Biochem. J. 236, 311.
    • (1986) Biochem. J. , vol.236 , pp. 311
    • Pickersgill, R.W.1
  • 33
    • 0016299203 scopus 로고
    • Regulatory behavior of monomeric enzymes - 1. The mnemonical enzyme concept
    • RICARD, J., MEUNIER, J.-C. & BUC, J. (1974). Regulatory behavior of monomeric enzymes - 1. The mnemonical enzyme concept. Eur. J. Biochem. 49, 195-208.
    • (1974) Eur. J. Biochem. , vol.49 , pp. 195-208
    • Ricard, J.1    Meunier, J.-C.2    Buc, J.3
  • 34
    • 0001436528 scopus 로고
    • On the geometry of transient relaxation
    • ROUSSEL, M. R. & FRASER, S. J. (1991). On the geometry of transient relaxation. J. Chem. Phys. 94, 7106-7113.
    • (1991) J. Chem. Phys. , vol.94 , pp. 7106-7113
    • Roussel, M.R.1    Fraser, S.J.2
  • 35
    • 33751384939 scopus 로고    scopus 로고
    • Global analysis of enzyme inhibition kinetics
    • ROUSSEL, M. R. & FRASER, S. J. (1993). Global analysis of enzyme inhibition kinetics. J. Phys. Chem. 97, 8316-8327; errata: ibid. 98, 5174.
    • (1993) J. Phys. Chem. , vol.97 , pp. 8316-8327
    • Roussel, M.R.1    Fraser, S.J.2
  • 36
    • 33751384939 scopus 로고    scopus 로고
    • errata
    • ROUSSEL, M. R. & FRASER, S. J. (1993). Global analysis of enzyme inhibition kinetics. J. Phys. Chem. 97, 8316-8327; errata: ibid. 98, 5174.
    • J. Phys. Chem. , vol.98 , pp. 5174
  • 37
    • 0024818508 scopus 로고
    • A theoretical treatment of damped oscillations in the transient state kinetics of single-enzyme reactions
    • RYDE-PETTERSSON, U. (1989). A theoretical treatment of damped oscillations in the transient state kinetics of single-enzyme reactions. Eur. J. Biochem. 186, 145-148.
    • (1989) Eur. J. Biochem. , vol.186 , pp. 145-148
    • Ryde-Pettersson, U.1
  • 38
    • 0025615914 scopus 로고
    • On the mechanistic origin of damped oscillations in biochemical reaction systems
    • RYDE-PETTERSSON, U. (1990). On the mechanistic origin of damped oscillations in biochemical reaction systems. Eur. J. Biochem. 194, 431-436.
    • (1990) Eur. J. Biochem. , vol.194 , pp. 431-436
    • Ryde-Pettersson, U.1
  • 39
    • 0025859085 scopus 로고
    • Identification of possible two-reactant sources of oscillations in the Calvin photosynthesis cycle and ancillary pathways
    • RYDE-PETTERSSON, U. (1991). Identification of possible two-reactant sources of oscillations in the Calvin photosynthesis cycle and ancillary pathways. Eur. J. Biochem. 198, 613-619.
    • (1991) Eur. J. Biochem. , vol.198 , pp. 613-619
    • Ryde-Pettersson, U.1
  • 40
    • 0026529511 scopus 로고
    • Oscillations in coupled enzymic reactions at high concentration of enzyme
    • RYDE-PETTERSSON, U. (1992a). Oscillations in coupled enzymic reactions at high concentration of enzyme. Biochim. Biophys. Acta 1119, 118-122.
    • (1992) Biochim. Biophys. Acta , vol.1119 , pp. 118-122
    • Ryde-Pettersson, U.1
  • 41
    • 0000611346 scopus 로고
    • Oscillations in the photosynthetic Calvin cycle - Examination of a mathematical model
    • RYDE-PETTERSSON, U. (1992b). Oscillations in the photosynthetic Calvin cycle - examination of a mathematical model. Acta Chem. Scand. 46, 406-408.
    • (1992) Acta Chem. Scand. , vol.46 , pp. 406-408
    • Ryde-Pettersson, U.1
  • 43
    • 0010318556 scopus 로고
    • Characteristics of light-dependent inorganic carbon uptake by isolated spinach chloroplasts
    • SICHER, R. C. (1984). Characteristics of light-dependent inorganic carbon uptake by isolated spinach chloroplasts. Plant Physiol. 74, 962-966.
    • (1984) Plant Physiol. , vol.74 , pp. 962-966
    • Sicher, R.C.1
  • 44
    • 0000210542 scopus 로고
    • Imaging of chlorophyll-a-fluorescence in leaves: Topography of photosynthetic oscillations in leaves of Glechoma hederacea
    • SIEBKE, K. & WEIS, E. (1995). Imaging of chlorophyll-a-fluorescence in leaves: topography of photosynthetic oscillations in leaves of Glechoma hederacea. Photosynth. Res. 45, 225-237.
    • (1995) Photosynth. Res. , vol.45 , pp. 225-237
    • Siebke, K.1    Weis, E.2
  • 45
    • 0017844480 scopus 로고
    • Stability analysis of biochemical systems - A practical guide
    • STUCKI, J. W. (1978). Stability analysis of biochemical systems - a practical guide. Prog. Biophys. Molec. Biol. 33, 99-187.
    • (1978) Prog. Biophys. Molec. Biol. , vol.33 , pp. 99-187
    • Stucki, J.W.1
  • 46
    • 27244462819 scopus 로고
    • The secant condition for instability in biochemical feedback control - I. The role of cooperativity and saturability
    • THRON, C. D. (1991). The secant condition for instability in biochemical feedback control - I. The role of cooperativity and saturability. Bull. Math. Biol. 53, 383-401.
    • (1991) Bull. Math. Biol. , vol.53 , pp. 383-401
    • Thron, C.D.1
  • 47
    • 0027462053 scopus 로고
    • Biochemical oscillations: The opposite dynamical effects of competitive and non-competitive enzyme inhibitors
    • THRON, C. D. (1993). Biochemical oscillations: the opposite dynamical effects of competitive and non-competitive enzyme inhibitors. Biophys. Chem. 46, 187-192.
    • (1993) Biophys. Chem. , vol.46 , pp. 187-192
    • Thron, C.D.1
  • 49
    • 0000614201 scopus 로고
    • Simultaneous measurement of oscillations in oxygen evolution and chlorophyll a fluorescence in leaf pieces
    • WALKER, D. A., SIVAK, M. N., PRINSLEY, R. T. & CHEESBROUGH, J. K. (1983b). Simultaneous measurement of oscillations in oxygen evolution and chlorophyll a fluorescence in leaf pieces. Plant Physiol. 73, 542-549.
    • (1983) Plant Physiol. , vol.73 , pp. 542-549
    • Walker, D.A.1    Sivak, M.N.2    Prinsley, R.T.3    Cheesbrough, J.K.4
  • 50
    • 0000481207 scopus 로고
    • Control of the rate of photosynthetic carbon dioxide fixation
    • WOODROW, I. E. (1986). Control of the rate of photosynthetic carbon dioxide fixation. Biochim. Biophys. Acta 851, 181-192.
    • (1986) Biochim. Biophys. Acta , vol.851 , pp. 181-192
    • Woodrow, I.E.1
  • 51
    • 0030064802 scopus 로고    scopus 로고
    • Limitation of the rate of ribulosebisphosphate carboxylase activation by carbamylation and ribulosebisphosphate carboxylase activase activity: Development and tests of a mechanistic model
    • WOODROW, I. E., KELLY, M. E. & MOTT, K. A. (1996). Limitation of the rate of ribulosebisphosphate carboxylase activation by carbamylation and ribulosebisphosphate carboxylase activase activity: development and tests of a mechanistic model. Aust. J. Plant Physiol. 23, 141-149.
    • (1996) Aust. J. Plant Physiol. , vol.23 , pp. 141-149
    • Woodrow, I.E.1    Kelly, M.E.2    Mott, K.A.3
  • 52
    • 0030001705 scopus 로고    scopus 로고
    • Modeling of continuously and directly analyzed biphasic reaction courses of ribulose 1,5-bisphosphate carboxylase/oxygenase
    • YOKOTA, A., WADANO, A. & MURAYAMA, H. (1996). Modeling of continuously and directly analyzed biphasic reaction courses of ribulose 1,5-bisphosphate carboxylase/oxygenase. J. Biochem. 119, 487-499.
    • (1996) J. Biochem. , vol.119 , pp. 487-499
    • Yokota, A.1    Wadano, A.2    Murayama, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.