-
1
-
-
0003888025
-
-
Cambridge University Press, Cambridge
-
Amit, D. (1989). Modeling Brain Function, Cambridge University Press, Cambridge.
-
(1989)
Modeling Brain Function
-
-
Amit, D.1
-
2
-
-
0027190754
-
Evaluation of secondary structure of proteins from UV circular dichroism spectra using an unsupervised learning neural network
-
Andrade, M., Chacon, P., Merelo, J. & Moran, F. (1993). Evaluation of secondary structure of proteins from UV circular dichroism spectra using an unsupervised learning neural network. Protein Eng. 6, 383-390.
-
(1993)
Protein Eng.
, vol.6
, pp. 383-390
-
-
Andrade, M.1
Chacon, P.2
Merelo, J.3
Moran, F.4
-
3
-
-
0030272365
-
Low resolution meets high: Towards a resolution continuum from cells to atoms
-
Baker, T. & Johnson, J. (1996). Low resolution meets high: towards a resolution continuum from cells to atoms. Curr. Opinion Struct. Biol. 6, 585-594.
-
(1996)
Curr. Opinion Struct. Biol.
, vol.6
, pp. 585-594
-
-
Baker, T.1
Johnson, J.2
-
4
-
-
85030344319
-
-
Arbeitsgruppe Quantenchemie an der Humboldt-Universität zu Berlin Max-Planck-Gesellschaft
-
Bleiber, A. & Hill, J. R. (1993). VIEWMOL, version 1.4 Arbeitsgruppe Quantenchemie an der Humboldt-Universität zu Berlin. Max-Planck-Gesellschaft.
-
(1993)
VIEWMOL, Version 1.4
-
-
Bleiber, A.1
Hill, J.R.2
-
5
-
-
0028046781
-
Towards atomic interpretation of F-actin filament three-dimensional reconstructions
-
Bremer, A., Henn, C., Goldie, K., Engel, A., Smith, P. & Aebi, U. (1994). Towards atomic interpretation of F-actin filament three-dimensional reconstructions. J. Mol. Biol. 242, 683-700.
-
(1994)
J. Mol. Biol.
, vol.242
, pp. 683-700
-
-
Bremer, A.1
Henn, C.2
Goldie, K.3
Engel, A.4
Smith, P.5
Aebi, U.6
-
6
-
-
0004158830
-
-
Oxford University Press, New York
-
Chiu, W., Burnett, R. & Garcea, R. (1997). Structural Biology of Viruses, Oxford University Press, New York.
-
(1997)
Structural Biology of Viruses
-
-
Chiu, W.1
Burnett, R.2
Garcea, R.3
-
7
-
-
0028958868
-
Flap opening in HIV-1 protease simulated by 'activated' molecular dynamics
-
Collins, J., Burt, S. & Erickson, J. (1995). Flap opening in HIV-1 protease simulated by 'activated' molecular dynamics. Nature Struct. Biol. 2, 334-338.
-
(1995)
Nature Struct. Biol.
, vol.2
, pp. 334-338
-
-
Collins, J.1
Burt, S.2
Erickson, J.3
-
8
-
-
0030991631
-
Macromolecular assemblages: Sizing things up
-
DeRosier, D. & Harrison, S. (1997). Macromolecular assemblages: sizing things up. Curr. Opin. Struct. Biol. 7, 237-238.
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 237-238
-
-
DeRosier, D.1
Harrison, S.2
-
9
-
-
0030250578
-
Analysis of structural variability within two-dimensional biological crystals by a combination of patch averaging techniques and self organizing maps
-
Fernandez, J. & Carazo, J. (1996). Analysis of structural variability within two-dimensional biological crystals by a combination of patch averaging techniques and self organizing maps. Ultramicroscopy, 65, 81-93.
-
(1996)
Ultramicroscopy
, vol.65
, pp. 81-93
-
-
Fernandez, J.1
Carazo, J.2
-
11
-
-
0026045381
-
Three-dimensional reconstructuion of the 70 S E. coli ribosome in ice: The distribution of ribosomal RNA
-
Frank, J., Penczek, P., Grassucci, R. & Srivastava, S. (1991). Three-dimensional reconstructuion of the 70 S E. coli ribosome in ice: the distribution of ribosomal RNA. J. Cell Biol. 115, 597-605.
-
(1991)
J. Cell Biol.
, vol.115
, pp. 597-605
-
-
Frank, J.1
Penczek, P.2
Grassucci, R.3
Srivastava, S.4
-
12
-
-
0030059225
-
Ligand binding and molecular mechanics calculation of the streptavidin-biotin rupture force
-
Grubmüller, H., Heymann, B. & Tavan, P. (1996). Ligand binding and molecular mechanics calculation of the streptavidin-biotin rupture force. Science, 271, 997-999.
-
(1996)
Science
, vol.271
, pp. 997-999
-
-
Grubmüller, H.1
Heymann, B.2
Tavan, P.3
-
14
-
-
84913537730
-
Fast generation of molecular surfaces from 3D data fields with an enhanced "marching cube" algorithm
-
Heiden, W., Goetze, T. & Brickmann, J. (1993). Fast generation of molecular surfaces from 3D data fields with an enhanced "marching cube" algorithm. J. Comp. Chem. 14, 246-250.
-
(1993)
J. Comp. Chem.
, vol.14
, pp. 246-250
-
-
Heiden, W.1
Goetze, T.2
Brickmann, J.3
-
15
-
-
0003979924
-
-
Addison-Wesley, New York
-
Hertz, J., Krogh, A. & Palmer, R. (1991). Introduction to the Theory of Neural Computation, Addison-Wesley, New York.
-
(1991)
Introduction to the Theory of Neural Computation
-
-
Hertz, J.1
Krogh, A.2
Palmer, R.3
-
16
-
-
0025075839
-
Atomic model of the actin filament
-
Holmes, K., Popp, D., Gebhard, W. & Kabsch, W. (1990). Atomic model of the actin filament. Nature, 347, 44-49.
-
(1990)
Nature
, vol.347
, pp. 44-49
-
-
Holmes, K.1
Popp, D.2
Gebhard, W.3
Kabsch, W.4
-
17
-
-
0029878720
-
VMD-visual molecular dynamics
-
Humphrey, W., Dalke, A. & Schulten, K. (1996). VMD-visual molecular dynamics. J. Mol. Graph. 14, 33-38.
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
18
-
-
0030987036
-
Molecular dynamics study of unbinding of the avidin-biotin complex
-
Izrailev, S., Stepaniants, S., Balsera, M., Oono, Y. & Schulten, K. (1997). Molecular dynamics study of unbinding of the avidin-biotin complex. Biophys. J. 72, 1568-1581.
-
(1997)
Biophys. J.
, vol.72
, pp. 1568-1581
-
-
Izrailev, S.1
Stepaniants, S.2
Balsera, M.3
Oono, Y.4
Schulten, K.5
-
19
-
-
0345240077
-
Steered molecular dynamics
-
Springer Verlag
-
Izrailev, S., Stepaniants, S., Isralewitz, B., Kosztin, D., Lu, H., Molnar, F., Wriggers, W. & Schulten, K. (1998). Steered molecular dynamics. In Algorithms for Macromolecular Modelling, Lecture Notes in Computational Science and Engineering, Springer Verlag.
-
(1998)
Algorithms for Macromolecular Modelling, Lecture Notes in Computational Science and Engineering
-
-
Izrailev, S.1
Stepaniants, S.2
Isralewitz, B.3
Kosztin, D.4
Lu, H.5
Molnar, F.6
Wriggers, W.7
Schulten, K.8
-
20
-
-
84893482610
-
A solution for the best rotation to relate two sets of vectors
-
Kabsch, W. (1976). A solution for the best rotation to relate two sets of vectors. Acta Crystallog. sect. A, 32, 922-923.
-
(1976)
Acta Crystallog. Sect. A
, vol.32
, pp. 922-923
-
-
Kabsch, W.1
-
21
-
-
12944249776
-
A discussion of the solution for the best rotation to relate two sets of vectors
-
Kabsch, W. (1978). A discussion of the solution for the best rotation to relate two sets of vectors. Acta Crystallog. sect. A, 34, 827-828.
-
(1978)
Acta Crystallog. Sect. A
, vol.34
, pp. 827-828
-
-
Kabsch, W.1
-
22
-
-
0024988340
-
Atomic structure of the actin:DNase I complex
-
Kabsch, W., Mannherz, H., Suck, D., Pai, E. & Holmes, K. (1990). Atomic structure of the actin:DNase I complex. Nature, 347, 37-44.
-
(1990)
Nature
, vol.347
, pp. 37-44
-
-
Kabsch, W.1
Mannherz, H.2
Suck, D.3
Pai, E.4
Holmes, K.5
-
23
-
-
0020068152
-
Self-organized formation of topologically correct feature maps
-
Kohonen, T. (1982). Self-organized formation of topologically correct feature maps. Biol. Cybern. 44, 59-69.
-
(1982)
Biol. Cybern.
, vol.44
, pp. 59-69
-
-
Kohonen, T.1
-
24
-
-
0023381475
-
Marching cubes: A high resolution 3D surface construction algorithm
-
Lorensen, W. & Cline, H. (1987). Marching cubes: a high resolution 3D surface construction algorithm. Comput. Graph. 21, 163-169.
-
(1987)
Comput. Graph.
, vol.21
, pp. 163-169
-
-
Lorensen, W.1
Cline, H.2
-
25
-
-
0027131941
-
Refinement of the F-actin model against X-ray fiber diffraction data by the use of a directed mutation algorithm
-
Lorenz, M., Popp, D. & Holmes, K. (1993). Refinement of the F-actin model against X-ray fiber diffraction data by the use of a directed mutation algorithm. J. Mol. Biol. 234, 826-836.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 826-836
-
-
Lorenz, M.1
Popp, D.2
Holmes, K.3
-
26
-
-
0028204732
-
Topology representing networks
-
Martinetz, T. & Schulten, K. (1994). Topology representing networks. Neural Networks, 7, 507-522.
-
(1994)
Neural Networks
, vol.7
, pp. 507-522
-
-
Martinetz, T.1
Schulten, K.2
-
27
-
-
0027632248
-
"Neural gas" for vector quantization and its application to time-series prediction
-
Martinetz, T. M., Berkovich, S. G. & Schulten, K. (1993). "Neural gas" for vector quantization and its application to time-series prediction. IEEE Trans. Neural Networks, 4, 558-569.
-
(1993)
IEEE Trans. Neural Networks
, vol.4
, pp. 558-569
-
-
Martinetz, T.M.1
Berkovich, S.G.2
Schulten, K.3
-
28
-
-
0030820734
-
Cofilin changes the twist of F-actin: Implications for actin filament dynamics and cellular function
-
McGough, A., Pope, B., Chiu, W. & Weeds, A. (1997). Cofilin changes the twist of F-actin: implications for actin filament dynamics and cellular function. J. Cell Biol. 138, 771-781.
-
(1997)
J. Cell Biol.
, vol.138
, pp. 771-781
-
-
McGough, A.1
Pope, B.2
Chiu, W.3
Weeds, A.4
-
29
-
-
0027251071
-
Structure of gelsolin segment 1-actin complex and the mechanism of filament severing
-
McLaughlin, P., Gooch, J., Mannherz, H.-G. & Weeds, A. (1993). Structure of gelsolin segment 1-actin complex and the mechanism of filament severing. Nature, 364, 685-692.
-
(1993)
Nature
, vol.364
, pp. 685-692
-
-
McLaughlin, P.1
Gooch, J.2
Mannherz, H.-G.3
Weeds, A.4
-
30
-
-
0030832286
-
The structure of actomyosin subfragment 1 complex: Results of searches using data from electron microscopy and X-ray crystallography
-
Mendelson, R. & Morris, E. (1997). The structure of actomyosin subfragment 1 complex: results of searches using data from electron microscopy and X-ray crystallography. Proc. Natl. Acad. Sci. USA, 94, 8533-8538.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 8533-8538
-
-
Mendelson, R.1
Morris, E.2
-
31
-
-
0030048070
-
Protein-protein interactions in the rigor actomyosin complex
-
Milligan, R. (1996). Protein-protein interactions in the rigor actomyosin complex. Proc. Natl. Acad. Sci. USA, 93, 21-26.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 21-26
-
-
Milligan, R.1
-
32
-
-
0025052483
-
Molecular structure of F-actin and location of surface binding sites
-
Milligan, R., Whittaker, M. & Safer, D. (1990). Molecular structure of F-actin and location of surface binding sites. Nature, 348, 217-221.
-
(1990)
Nature
, vol.348
, pp. 217-221
-
-
Milligan, R.1
Whittaker, M.2
Safer, D.3
-
33
-
-
0027328612
-
A conformational change in the actin subunit can change the flexibility of the actin filament
-
Orlova, A. & Egelman, E. (1993). A conformational change in the actin subunit can change the flexibility of the actin filament. J. Mol. Biol. 232, 334-341.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 334-341
-
-
Orlova, A.1
Egelman, E.2
-
34
-
-
0027226230
-
Structure of the actin-myosin complex and its implications for muscle contraction
-
Rayment, I., Holden, H., Whittaker, M., Yohn, C., Lorenz, M., Holmes, K. & Milligan, R. (1993a). Structure of the actin-myosin complex and its implications for muscle contraction. Science, 261, 58-65.
-
(1993)
Science
, vol.261
, pp. 58-65
-
-
Rayment, I.1
Holden, H.2
Whittaker, M.3
Yohn, C.4
Lorenz, M.5
Holmes, K.6
Milligan, R.7
-
35
-
-
0027194702
-
Three-dimensional structure of myosin subfragment-1: A molecular motor
-
Rayment, I., Rypniewski, W., Schmidt-Base, K., Smith, R., Tomchick, D., Benning, M., Winkelmann, D., Wesenberg, G. & Holden, H. (1993b). Three-dimensional structure of myosin subfragment-1: a molecular motor. Science, 261, 50-58.
-
(1993)
Science
, vol.261
, pp. 50-58
-
-
Rayment, I.1
Rypniewski, W.2
Schmidt-Base, K.3
Smith, R.4
Tomchick, D.5
Benning, M.6
Winkelmann, D.7
Wesenberg, G.8
Holden, H.9
-
36
-
-
0003647182
-
-
Addison-Wesley, New York
-
Ritter, H., Martinetz, T. & Schulten, K. (1992). Neural Computation and Self-organizing Maps: An Introduction, Addison-Wesley, New York.
-
(1992)
Neural Computation and Self-organizing Maps: An Introduction
-
-
Ritter, H.1
Martinetz, T.2
Schulten, K.3
-
37
-
-
0031964126
-
Feature-extraction from endopeptidase cleavage sites in mitochondrial targeting peptides
-
Schneider, G., Sjoling, S., Wallin, E., Wrede, P., Glaser, E. & von Heijne, G. (1998). Feature-extraction from endopeptidase cleavage sites in mitochondrial targeting peptides. Proteins: Struct. Funct. Genet. 30, 49-60.
-
(1998)
Proteins: Struct. Funct. Genet.
, vol.30
, pp. 49-60
-
-
Schneider, G.1
Sjoling, S.2
Wallin, E.3
Wrede, P.4
Glaser, E.5
Von Heijne, G.6
-
38
-
-
0027220271
-
Three-dimensional atomic model of F-actin decorated with Dictyostelium myosin S1
-
Schröder, R., Manstein, D., Jahn, W., Holden, H., Rayment, I., Holmes, K. & Spudich, J. (1993). Three-dimensional atomic model of F-actin decorated with Dictyostelium myosin S1. Nature, 364, 171-174.
-
(1993)
Nature
, vol.364
, pp. 171-174
-
-
Schröder, R.1
Manstein, D.2
Jahn, W.3
Holden, H.4
Rayment, I.5
Holmes, K.6
Spudich, J.7
-
39
-
-
0029860175
-
Local structural motifs of protein backbones are classified by self-organizing neural networks
-
Schuchhardt, J., Schneider, G., Reichelt, J., Schomburg, D. & Wrede, P. (1996). Local structural motifs of protein backbones are classified by self-organizing neural networks. Protein Eng. 9, 833-842.
-
(1996)
Protein Eng.
, vol.9
, pp. 833-842
-
-
Schuchhardt, J.1
Schneider, G.2
Reichelt, J.3
Schomburg, D.4
Wrede, P.5
-
40
-
-
0343811700
-
A model for the microtubule-ncd motor protein complex obtained by cryo-electron microscopy and image analysis
-
Sosa, H., Dias, P., Hoenger, A., Whittaker, M., Wilson-Kubalek, E., Sablin, E., Fletterick, R., Vale, R. & Milligan, R. (1997). A model for the microtubule-ncd motor protein complex obtained by cryo-electron microscopy and image analysis. Cell, 90, 217-224.
-
(1997)
Cell
, vol.90
, pp. 217-224
-
-
Sosa, H.1
Dias, P.2
Hoenger, A.3
Whittaker, M.4
Wilson-Kubalek, E.5
Sablin, E.6
Fletterick, R.7
Vale, R.8
Milligan, R.9
-
41
-
-
13344275187
-
Molecular docking programs successfully predict the binding of a β-lactamase inhibitory protein to TEM-1 β-lactamase
-
Strynadka, N., Eisenstein, M., Katchalski-Katzir, E., Shoichet, B., Kuntz, I., Abagyan, R., Totrov, M., Janin, J., Cherfils, J., Zimmerman, F., Olson, A., Duncan, B., Rao, M., Jackson, R., Sternberg, M. & James, M. (1996). Molecular docking programs successfully predict the binding of a β-lactamase inhibitory protein to TEM-1 β-lactamase. Nature Struct. Biol. 3, 233-239.
-
(1996)
Nature Struct. Biol.
, vol.3
, pp. 233-239
-
-
Strynadka, N.1
Eisenstein, M.2
Katchalski-Katzir, E.3
Shoichet, B.4
Kuntz, I.5
Abagyan, R.6
Totrov, M.7
Janin, J.8
Cherfils, J.9
Zimmerman, F.10
Olson, A.11
Duncan, B.12
Rao, M.13
Jackson, R.14
Sternberg, M.15
James, M.16
-
42
-
-
0028861589
-
Normal modes as refinement parameters for the F-actin model
-
Tirion, M., ben-Avraham, D., Lorenz, M. & Holmes, K. (1995). Normal modes as refinement parameters for the F-actin model. Biophys. J. 68, 5-12.
-
(1995)
Biophys. J.
, vol.68
, pp. 5-12
-
-
Tirion, M.1
Ben-Avraham, D.2
Lorenz, M.3
Holmes, K.4
-
43
-
-
0028576841
-
Use of the Kohonen self-organizing map to study the mechanisms of action of chemotherapeutic agents
-
van Osdol, W., Myers, T., Paull, K., Kohn, K. & Weinstein, J. (1994). Use of the Kohonen self-organizing map to study the mechanisms of action of chemotherapeutic agents. J. Natl Cancer Inst. 86, 1853-1859.
-
(1994)
J. Natl Cancer Inst.
, vol.86
, pp. 1853-1859
-
-
Van Osdol, W.1
Myers, T.2
Paull, K.3
Kohn, K.4
Weinstein, J.5
-
44
-
-
0000908039
-
Prediction of water binding sites on proteins by neural networks
-
Wade, R., Bohr, H. & Wolynes, P. (1992). Prediction of water binding sites on proteins by neural networks. J. Am. Chem. Soc. 114, 8284-8285.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 8284-8285
-
-
Wade, R.1
Bohr, H.2
Wolynes, P.3
-
45
-
-
0017166860
-
How patterned neural connections can be set up by self-organization
-
Willshaw, D. & von der Malsburg, C. (1976). How patterned neural connections can be set up by self-organization. Proc. Roy. Soc. ser. B, 194, 431-445.
-
(1976)
Proc. Roy. Soc. Ser. B
, vol.194
, pp. 431-445
-
-
Willshaw, D.1
Von Der Malsburg, C.2
-
46
-
-
0344534333
-
Investigating a back door mechanism of actin phosphate release by steered molecular dynamics
-
In the press
-
Wriggers, W. & Schulten, K. (1998). Investigating a back door mechanism of actin phosphate release by steered molecular dynamics. Proteins: Struct. Funct. Genet. In the press.
-
(1998)
Proteins: Struct. Funct. Genet.
-
-
Wriggers, W.1
Schulten, K.2
-
47
-
-
0031167921
-
Motion planning of a pneumatic robot using a neural network
-
Zeller, M., Sharma, R. & Schulten, K. (1997). Motion planning of a pneumatic robot using a neural network. IEEE Control Systems Magazine, 17, 89-98.
-
(1997)
IEEE Control Systems Magazine
, vol.17
, pp. 89-98
-
-
Zeller, M.1
Sharma, R.2
Schulten, K.3
|