ATP binding to the Escherichia coli clamp loader powers opening of the ring-shaped clamp of DNA polymerase III holoenzyme

Journal of Biological Chemistry

Volumn 273, Issue 38, 1998, Pages 24550-24563

  Hingorani, Manju M ^a   O'Donnell, Mike ^a  

^a ROCKEFELLER UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE 5' O (3 THIOTRIPHOSPHATE); ADENOSINE TRIPHOSPHATE; DNA DIRECTED DNA POLYMERASE GAMMA; DOUBLE STRANDED DNA; SINGLE STRANDED DNA;

ARTICLE; BINDING AFFINITY; DNA BINDING; DNA REPLICATION; DNA SYNTHESIS; ESCHERICHIA COLI; HYDROLYSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION;

ADENOSINE TRIPHOSPHATE; BASE SEQUENCE; BINDING SITES; DNA; DNA POLYMERASE III; DNA PRIMERS; DNA REPLICATION; DNA, BACTERIAL; ESCHERICHIA COLI; KINETICS; MACROMOLECULAR SUBSTANCES; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES; PROTEIN CONFORMATION; RECOMBINANT PROTEINS;

ESCHERICHIA COLI; FELIS CATUS;

EID: 0032544708     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.273.38.24550     Document Type: Article

References (59)

1. Kelman, Z., and O'Donnell, M. (1995) Annu. Rev. Biochem. 64, 171-200
2. Stillman, B. (1994) Cell 78, 725-728
3. Kuriyan, J., and O'Donnell, M. (1994) J. Mol. Biol. 234, 915-925
4. Lee, S. H, and Walker, J. R. (1987) Proc. Natl. Acad. Sci. U. S. A. 84, 2713-2717
5. Tsuchihashi, Z., and Kornberg, A. (1989) J. Biol. Chem. 264, 17790-17795
6. Maki, S., and Kornberg, A. (1988) J. Biol. Chem. 263, 6555-6560
7. Xiao, H., Naktinis, V., and O'Donnell, M. (1995) J. Biol. Chem. 270, 13378-13383
8. Kong, X. P., Onrust, R., O'Donnell, M., and Kuriyan, J. (1992) Cell 69, 425-437
9. Maki, H., and Kornberg, A. (1985) J. Biol. Chem. 260, 12987-12992
10. DiFrancesco, R., Bhatnagar, S. K., Brown, A., and Bessman, M. J. (1984) J. Biol. Chem. 259, 5567-5573
11. Scheuermann, R. H., and Echols, H. (1985) Proc. Natl. Acad. Sci. U. S. A. 81, 7747-7751
12. Studwell-Vaughan, P. S., and O'Donnell, M. (1993) J. Biol. Chem. 268, 11785-11791
13. McHenry, C. S., and Crow, W. (1979) J. Biol. Chem. 254, 1748-1753
14. McHenry, C. S. (1991) J. Biol. Chem. 266, 19127-19130
15. Studwell-Vaughan, P. S., and O'Donnell, M. (1991) J. Biol. Chem. 266, 19833-19841
16. Onrust, R., Finkelstein, J., Turner, J., Naktinis, V., and O'Donnell, M. (1995) J. Biol. Chem. 270, 13366-13377
17. Fay, P. J., Johanson, K. O., McHenry, C. S., and Bambara, R. A. (1981) J. Biol. Chem. 256, 976-983
18. Maki, S., and Kornberg, A. (1988) J. Biol. Chem. 263, 6561-6569
19. Stukenberg, P. T., Studwell-Vaughan, P. S., and O'Donnell, M. (1991) J. Biol. Chem. 266, 11328-11334
20. Sinha, N. K., Morris, C. F., and Alberts, B. M. (1980) J. Biol. Chem. 255, 4290-4293
21. Maki, H., Maki, S., and Kornberg, A. (1988) J. Biol. Chem. 263, 6570-6578
22. Wu, C. A., Zechner, E. L., Hughes, A. J., Jr., Franden, M. A., McHenry, C. S., and Marians, K. J. (1992) J. Biol. Chem. 267, 4064-4073
23. Yuzhakov, A., Turner, J., and O'Donnell, M. (1996) Cell 86, 877-886
24. Stukenberg, P. T., Turner, J. T., and O'Donnell, M. (1994) Cell 78, 877-887
25. Sancar, A., and Hearst, J. E. (1993) Science 259, 1415-1420
26. Onrust, R., Finkelstein, J., Naktinis, V., Turner, J., Fang, L., and O'Donnell, M. (1995) J. Biol. Chem. 270, 13348-13357
27. Naktinis, V., Onrust, R., Fang, L., and O'Donnell, M. (1995) J. Biol. Chem. 270, 13358-13365
28. Onrust, R., Stukenberg, P. T., and O'Donnell, M. (1991) J. Biol. Chem. 266, 21681-21686
29. O'Donnell, M., and Studwell, P. S. (1990) J. Biol. Chem. 265, 1179-1187
30. Kelman, Z., Yuzhakov, A., Andjelkovic, J., O'Donnell, M. (1998) EMBO J. 17, 2436-2449
31. Studwell, P. S., and O'Donnell, M. (1990) J. Biol. Chem. 265, 1171-1178
32. Onrust, R. (1993) The Structure and Function of Accessory Proteins of the E. coli DNA Polymerase III Holoenzyme, Ph.D. thesis, pp. 198-203, Cornell University Medical College
33. Dong, Z., Onrust, R., Skangalis, M., and O'Donnell, M. (1993) J. Biol. Chem. 268, 11758-11765
34. Xiao, H., Crombie, R., Dong, Z., Onrust, R., and O'Donnell, M. (1993) J. Biol. Chem. 268, 11773-11778
35. Turner, J., and O'Donnell, M. (1995) Methods Enzymol. 262, 442-449
36. Kelman, Z., Naktinis, V., and O'Donnell, M. (1995) Methods Enzymol. 262, 430-442
37. Schagger, H., and von Jagow, G. (1987) Anal. Biochem. 166, 368-379
38. Naktinis, V., Turner, J., and O'Donnell, M. (1996) Cell 84, 137-145
39. Stukenberg, P. T., and O'Donnell, M. (1995) J. Biol. Chem. 270, 13384-13391
40. Xiao, H. (1996) Structural and Functional Analysis of the Clamp Loader in the E. coli DNA Polymerase III Holoenzyme, Ph.D. thesis, Cornell University Medical College
41. Biswas, S. B., and Kornberg, A. (1984) J. Biol. Chem. 259, 7990-7993
42. Berger, J. M., Gamblin, S. J., Harrison, S. C., and Wang, J. C. (1996) Nature 379, 225-232
43. Xiao, H., Dong, Z., and O'Donnell, M. (1993) J. Biol. Chem. 268, 11779-11784
44. Dallmann, H. G., and McHenry, C. S. (1995) J. Biol. Chem. 270, 29563-29569
45. Guenther, B., Onrust, R., Sali, A., O'Donnell, M., and Kuriyan, J. (1997) Cell 91, 335-345
46. Sali, A., and Blundell, T. L. (1993) J. Mol. Biol. 234, 779-815
47. Sippl, M. (1993) Proteins Struct. Funct. Genet. 17, 355-362
48. Pietroni, P., Young, M. C., Latham, G. J., and von Hippel, P. H. (1997) J. Biol. Chem. 272, 31666-31676
49. Sexton, D. J., Carver, T. E., Berdis, A. J., and Benkovic, S. J. (1996) J. Biol. Chem. 271, 28045-28051
50. Bloom, L. B., Turner, J., Kelman, Z., Beechem, J. M., O'Donnell, M., and Goodman, M. F. (1996) J. Biol. Chem. 271, 30699-30708
51. Reems, J. A., Wood, S., and McHenry, C. S. (1995) J. Biol. Chem. 270, 5606-5613
52. Bertram, J. G., Bloom, L. B., Turner, J. T., O'Donnell, M., Beechem, J. M., and Goodman, M. F. (1998) J. Biol. Chem. 273, 24564-24574
53. Berdis, A. J., and Benkovic, S. J. (1997) Biochemistry 36, 2733-2743
54. Kaboord, B. F., and Benkovic, S. J. (1995) Curr. Biol. 5, 149-157
55. Capson, T. L., Benkovic, S. J., and Nossal, N. G. (1991) Cell 65, 249-258
56. Munn, M. M., and Alberts, B. M. (1991) J. Biol. Chem. 266, 20034-20044
57. Lee, S., and Hurwitz, J. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 5672-5676
58. Burgers, P. M. J. (1991) J. Biol. Chem. 266, 22698-22706
59. Olson, M. W., Dallmann, H. G., and McHenry, C. S. (1995) J. Biol. Chem. 270, 29570-29577