Cation binding to DNA studied by ion-transfer voltammetry at micropipets

Analytical Chemistry

Volumn 70, Issue 22, 1998, Pages 4653-4660

  Horrocks, B R ^a   Mirkin, M V ^b  

^a NEWCASTLE UNIVERSITY   (United Kingdom)

^b CITY UNIVERSITY OF NEW YORK   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CATION; DNA; OLIGONUCLEOTIDE;

ARTICLE; DNA BINDING; DNA CONFORMATION; ION TRANSPORT; MICROPIPETTE; POTENTIOMETRY;

EID: 0032533168     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac980718l     Document Type: Article

References (55)

1. (a) Blackburn, G. M.; Gait, M. J. Nucleic Acids in Chemistry and Biology; IRL Press: New York, 1990.
2. (b) Lippard, S. J. Acc. Chem. Res. 1978, 11, 211.
3. (c) Clarke, M. J. In Inorganic Chemistry in Biology and Medicine; ACS Symposium Series 140; Martell, A. E., Ed.; American Chemical Society: Washington, DC, 1980; p 157.
4. Honig, B.; Nicholls, A. Science 1995, 268, 1144.
5. Record, M. T., Jr.; Anderson, C. F.; Lohman, T. M. Q. Rev. Biophys. 1978, 11, 103.
6. Griffin, J. H.; Dervan, P. B. J. Am. Chem. Soc, 1987, 109, 6840.
7. Van Dyke, M. W.; Dervan, P. B. Biochemistry 1983, 22, 2373.
8. Shultz, P. G.; Dervan, P. B. J. Am. Chem. Soc. 1983, 105, 7748.
9. Youngquist, R. S.; Dervan, P. B. J. Am. Chem. Soc. 1985, 107, 5528.
10. Barton, J. K. Science 1986, 233, 727.
11. Barton, J. K. Comments Inorg. Chem. 1985, 3, 321.
12. Millan, K. M.; Saurallo, A.; Mikkelsen, S. R. Anal. Chem. 1994, 66, 2943.
13. (a) Xu, X.-H.; Yang, H. C.; Mallouk, T. E.; Bard, A. J. J. Am. Chem. Soc. 1994, 116, 8386.
14. (b) Su, H.; Williams, P.; Thompson, M. Anal. Chem. 1995, 67, 1010.
15. Wang, J.; Cai, X. H.; Rivas, G.; Shiraishi, H.; Farias, P. A. M.; Dontha, N. Anal. Chem. 1996, 68, 2629.
16. Cohen, G.; Eisenberg, H. Biopolymers 1966, 4, 429.
17. Gabbay, E. J.; Scofield, R. E.; Baxter, C. S. J. Am. Chem. Soc. 1973, 95, 7850.
18. Cusumano, M.; Di Pietro, M. L.; Giannetto, A.; Nicolo, F.; Rotondo, E. Inorg. Chem. 1998, 37, 563.
19. Sitlani, A.; Long, E. C.; Pyle, A. M.; Barton, J. K. J. Am. Chem. Soc. 1992, 114, 2303.
20. Welch, T. W.; Corbett, A. H.; Thorp, H. H. J. Phys. Chem. 1995, 99, 11757. Kalsbeck, W. A.; Thorp, H. H. Inorg. Chem. 1994, 33, 3427.
21. Welch, T. W.; Corbett, A. H.; Thorp, H. H. J. Phys. Chem. 1995, 99, 11757. Kalsbeck, W. A.; Thorp, H. H. Inorg. Chem. 1994, 33, 3427.
22. Arkin, M. R..; Stemp, E. D. A.; Turro, C.; Turro, N. J.; Barton, J. K. J. Am. Chem. Soc. 1996, 118, 2267.
23. Rodriguez, M.; Bard, A. J. Anal. Chem. 1990, 62, 2658.
24. Carter, M. T.; Bard, A. J. Bioconjugate Chem. 1990, 2, 257.
25. Kumar, C. V.; Barton, J. K.; Turro, N. J. J. Am. Chem. Soc. 1985, 107, 5518.
26. Li, A. Z.; Qi, J. L.; Shih, H. H.; Marx, K. A. Biopolymers 1995, 38, 367.
27. Rehmann, J. P.; Barton, J. K. Biochemistry 1990, 29, 1701.
28. Bleam, M. L.; Anderson, C. F.; Record, M. T., Jr. Proc. Natl. Acad. Sci. U.S.A. 1980, 77, 3085.
29. Welch, T. W.; Thorp, H. H. J. Phys. Chem. 1996, 100, 13829.
30. Berg, H.; Fiedler, U.; Lemming, J.; Horn, G. Bioelectrochem. Bioenerg. 1985, 14, 417.
31. Palecek, E. Bioelectrochem. Bioenerg. 1986, 15, 275.
32. Declerck, P. J.; De Ranter, C. J. Chem. Soc., Faraday Trans. 1987, 83, 257.
33. Carter, M. T.; Rodriguez, M.; Bard, A. J. J. Am. Chem. Soc. 1989, 111, 8901.
34. Carter, M. T.; Bard, A. J. J. Am. Chem. Soc. 1987, 109, 7528.
35. Swiatek, J. J. Coord. Chem. 1994, 33, 191 and references therein.
36. (a) Ciszkowska, M.; Osteryoung, J. G. J. Phys. Chem. B 1998, 102, 291.
37. (b) Daniele, S.; Lavagnini, I.; Baldo, M. A.; Magno, F. Anal. Chem. 1998, 70, 285.
38. (c) Kelley, S. O.; Barton, J. K.; Jackson, N. M.; Hill, M. G. Bioconjugate Chem. 1997, 8, 31.
39. (a) Girault, H. H. In Modern Aspects of Electrochemistry, Bockris, J. O'M., Conway, B. E., White, R. E., Eds.; Plenum Press: New York, 1993; Vol. 25; p 1.
40. (b) Liquid-Liquid Interfaces. Theory and Methods; Volkov, A. G., Deamer D. W., Eds; CRC Press: Boca Raton, FL, 1996.
41. (a) Taylor, G.; Girault, H. H. J. Electroanal. Chem. 1986, 208, 179.
42. (b) Shao, Y.; Osborne, M. D.; Girault, H. H. J. Electroanal. Chem. 1991, 318, 101.
43. Shao, Y.; Mirkin, M. V. Anal. Chem. 1998, 70, 3155.
44. Reichmann, M. E.; Rice, S. A.; Thomas, C. A.; Doty, P. J. Am. Chem. Soc. 1954, 76, 3047.
45. Marmur, J. J. Mol. Biol. 1961, 3, 208.
46. Evans, D. H. J. Electroanal. Chem. 1989, 258, 451.
47. Jiang, R.; Anson, F. C. J. Phys. Chem. 1991, 95, 5701.
48. Blauch, D. N.; Anson, F. C. J. Electroanal. Chem. 1991, 309, 313.
49. Aslanoglu, M. A. Ph.D. Thesis, University of Newcastle upon Tyne, U.K., 1997.
50. (a) Wong, Y. S.; Lippard, S. J. Chem. Commun. 1977, 824.
51. (b) Wang, A. H.-J.; Nathans, J.; van der Marel, G. A.; van Boom, J. H.; Rich, A. Nature 1978, 276, 471.
52. Scatchard, G. Ann. N. Y. Acad. Sci. 1949, 51, 660.
53. McGhee, J. D.; von Hippel, P. H. J. Mol. Biol. 1974, 86, 469.
54. 2+ are obtained from either the McGhee-von Hippel or Scatchard analysis.
55. Matsuda, H.; Yamada, Y.; Kanamori, K.; Kudo, Y.; Takeda, Y. Bull. Chem. Soc. Jpn. 1991, 64, 1497.