A highly conserved intraspecies homolog of the Saccharomyces cerevisiae elongation factor-3 encoded by the HEF3 gene

Yeast

Volumn 14, Issue 12, 1998, Pages 1105-1113

  Maurice, Trina C ^a   Mazzucco, Charles E ^a   Ramanathan, Chandra S ^a   Ryan, Brenda M ^a   Warr, Glenn A ^a   Puziss, John W ^a  

^a BRISTOL MYERS SQUIBB   (United States)

Author keywords

EF 3; Elongation factor 3; Homolog; Yeast

Indexed keywords

ADENOSINE TRIPHOSPHATASE; AMINO ACID; ELONGATION FACTOR 3; MESSENGER RNA;

AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; DATA BASE; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENOME; MOLECULAR CLONING; NONHUMAN; NORTHERN BLOTTING; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SPOROGENESIS; YEAST;

ADENOSINE TRIPHOSPHATASES; AMINO ACID SEQUENCE; BLOTTING, NORTHERN; CLONING, MOLECULAR; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DATABASES, FACTUAL; FUNGAL PROTEINS; GENE EXPRESSION; GENES, ESSENTIAL; GENES, FUNGAL; GENETIC COMPLEMENTATION TEST; GENETIC VECTORS; PEPTIDE ELONGATION FACTORS; PHENOTYPE; PLASMIDS; RECOMBINANT FUSION PROTEINS; RIBOSOMES; RNA, MESSENGER; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE DELETION; SEQUENCE HOMOLOGY, AMINO ACID;

FUNGI; MYXOGASTRIA; SACCHAROMYCES CEREVISIAE;

EID: 0032530680     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0061(19980915)14:12<1105::AID-YEA313>3.0.CO;2-Y     Document Type: Article

References (25)

1. Altschul, S., Gish, W., Miller, W., Myers, E. and Lipman, D. (1990). Basic local alignment search tool. J. Mol Biol. 215, 403-410.
2. Boeke, J., Lacroute, F. and Fink, G. (1984). A positive selection for mutants lacking orotidine-5′-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance. Mol. Gen. Genet. 197, 345.
3. Colthurst, D., Santos, M., Grant, C. and Tuite, M. (1991). Candida albicans and three other Candida species contain an elongation factor structurally and functionally analogous to elongation factor-3. FEMS Microbiol. Lett. 80, 45-50.
4. Dasmahapatra, B. and Chakraburtty, K. (1981). Protein synthesis in yeast: Purification and properties of elongation factor-3 from Saccharomyces cerevisiae. J. Biol. Chem. 256, 9999-10011.
5. DiDomenico, B., Lupisella, J., Sandbaken, M. and Chakraburtty, K. (1992). Isolation and sequence analysis of the gene encoding translation elongation factor 3 from Candida albicans. Yeast 8, 337-352.
6. Farkas, I., Hardy, T., Goebl, M. and Roach, P. (1991). Two glycogen synthase isoforms in Saccharomyces cerevisiae are coded by distinct genes that are differentially controlled. J. Biol. Chem. 266, 15602-15607.
7. Goffeau, A., Barrell, B., Bussey, H., et al. (1996). Life with 6000 genes. Science 274, 562-567.
8. Guthrie, C. and Fink, G. (Eds) (1991). Guide to Yeast Genetics and Molecular Biology. Academic Press, New York.
9. Hanahan, D. (1983). Studies on transformation of Escherichia cali with plasmids. J. Mol. Biol. 166, 557-580.
10. Kaiser, C., Michaelis, S. and Mitchell, A. (1994). Methods in Yeast Genetics. Cold Spring Harbor Press, Cold Spring Harbor, NY.
11. Kambampati, R. and Chakraburtty, K. (1997). Over-expression and purification of elongation factor 3 from Saccharomyces cerevisiae. Protein Expression and Purification 10, 209-213.
12. Kovalchuke, O. and Chakraburtty, K. (1994). Comparative analysis of ribosome associated adenosine triphosphate (ATPase) from pig liver and the ATPase of elongation factor 3 from Saccharomyces cerevisiae. Eur. J. Biochem. 226, 133-140.
13. Kovalchuke, O., Ziehler, J. and Chakraburtty, K. (1995). Comparative analysis of ATPase of yeast elongation factor 3 and ATPase associated with Tetrahymena ribosomes. Biochimie 77, 713-718.
14. Lanzetta, P., Alvarez, L., Reinach, P. and Candia, O. (1979). An improved assay for nanomole amounts of inorganic phosphate. Anal. Biochem. 100, 95-97.
15. Leer, R., Raamsdonk-Duin, M. V., Mager, W. and Planta, R. (1985). Conserved sequences upstream of yeast ribosomal protein genes. Current Genetics 9, 273-277.
16. Mazur, P., Morin, N., Baginsky, W., et al (1995). Differential expression and function of two homologous subunits of yeast 1,3-β-D-glucan synthase. Mol. Cell. Biol. 15, 5671-5681.
17. Qin, S., Moldave, K. and McLaughlin, C. (1987). Isolation of the yeast gene encoding elongation factor 3 for protein synthesis. J. Biol. Chem. 262, 7802-7807.
18. Sambrook, J., Fritsch, E. and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Press, Cold Spring Harbor, NY.
19. Sandbaken, M., Lupisella, J., Didomenico, B. and Chakraburtty, K. (1990). Protein synthesis in yeast: structural and functional analysis of the gene encoding elongation factor 3. J. Biol. Chem. 1990, 15838-15844.
20. Sharp, P. and Li, W.-H. (1987). The codon adaptation index - a measure of directional synonymous codon usage bias, and its potential application. Nucl. Acids Res. 15, 1281-1295.
21. Sikorski, R. and Hieter, P. (1989). A system of shuttle vectors and host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
22. Triana-Alonso, F., Chakraburtty, K. and Nierhaus, K. (1995). The elongation factor 3 unique in higher fungi and essential for protein biosynthesis is an E site factor. J. Biol. Chem. 270, 20473-20478.
23. Wingender, E. (1994). Recognition of regulatory regions in genomic sequences. J. Biotechnol. 35, 273-280.
24. Wolfe, K. and Shields, D. (1997). Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387, 708-713.
25. Woudt, L., Mager, W., Nieuwint, R., et al. (1987). Analysis of upstream activation sites of yeast ribosomal genes. Nucl. Acids Res. 15, 6037-6048.