Identification of a 700-kb region of common allelic loss in chromosome bands 3p14.3-p21.1 in Human renal cell carcinoma

Cancer Genetics and Cytogenetics

Volumn 104, Issue 2, 1998, Pages 104-110

  Orikasa, Kazuhiko ^a   Orikasa, Seiichi ^a   Horii, Akira ^a  

^a TOHOKU UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ALLELE; ARTICLE; CHROMOSOME 3P; CHROMOSOME BANDING PATTERN; CONTROLLED STUDY; COSMID; FEMALE; FLUORESCENCE IN SITU HYBRIDIZATION; HETEROZYGOSITY LOSS; HUMAN; HUMAN TISSUE; KIDNEY CARCINOMA; MAJOR CLINICAL STUDY; MALE; MICROSATELLITE INSTABILITY; PRIORITY JOURNAL; TUMOR SUPPRESSOR GENE; YEAST ARTIFICIAL CHROMOSOME;

ADULT; AGED; AGED, 80 AND OVER; ALLELES; CARCINOMA, RENAL CELL; CHROMOSOME BANDING; CHROMOSOME DELETION; CHROMOSOMES, ARTIFICIAL, YEAST; CHROMOSOMES, HUMAN, PAIR 3; FEMALE; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; KIDNEY NEOPLASMS; LOSS OF HETEROZYGOSITY; MALE; MIDDLE AGED;

EID: 0032527858     PISSN: 01654608     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0165-4608(97)00470-6     Document Type: Article

References (29)

1. Satomi Y., Fukuda M., Hosaka M., Kondo I., Yoshimura S., Fukushima S., Ida T., Hirokawa M., Morita T., Furuhata A., Kumagai H., Shiozaki H., Ishizuka E., Miyai K., Senga Y., Fukuoka H., Sasaki K., Kodaira T., Nakahashi M. Prognosis in 550 cases with renal cell carcinoma. Jpn J Urol. 79:1988;853-863.
2. Pathak S., Strong L.C., Ferrell R.E., Trindade A. Familial renal cell carcinoma with a (3;11) chromosome translocation limited to tumor cells. Science. 217:1982;939-941.
3. Morita R., Sato S., Ishikawa J., Ogawa O., Yosida O., Yamakawa K., Nakamura Y. Common regions of deletion on chromosomes 5q, 6q, and 10q in renal cell carcinoma. Cancer Res. 51:1991;5817-5820.
4. Yamakawa K., Morita R., Takahashi E., Hori T., Ishikawa J., Nakamura Y. A detailed deletion mapping of the short arm of chromosome 3 in sporadic renal cell carcinoma. Cancer Res. 51:1991;4707-4711.
5. Shimizu M., Yokota J., Mori N., Shuin T., Shinoda M., Terada M., Oshimura M. Introduction of chromosome 3p modulates the tumorigenicity of a human renal cell carcinoma cell line YCR. Oncogene. 5:1990;185-194.
6. Latif F., Tory K., Gnarra J., Yao M., Dur F.M., Orcutt M.L., Stackhouse T., Kuzmin I., Modi W., Geil L., Schmidt L., Zhou F., Li H., Wei M.H., Chen F., Glenn G., Choyke P., Walther M.M., Weng Y., Duan D.S.R., Dean M., Glavac D., Richards F.M., Crossey P.A., Ferguson-Smith P.A., Paslier D.L., Chumakov I., Cohen D., Chinault A.C., Maher E.R., Linehan W.M., Zbar B., Lerman M.I. Identification of the von Hippel-Lindau disease tumor suppressor gene. Science. 260:1993;1317-1320.
7. LaForgia S., Morse B., Levy J., Barnea G., Cannizzaro L.A., Li F., Nowell P.C., Boghosian-Sell L., Grick J., Weston A., Harris C.C., Drabkin H., Patterson D., Croce C.M., Schlessinger J., Huebner K. Receptor protein-tyrosine phosphatase gamma is a candidate tumor suppressor gene at human chromosome region 3p21. Proc Natl Acad Sci USA. 88:1991;5036-5040.
8. Kastury K., Ohta M., Lasota J., Moir D., Dorman T., LaForgia S., Druck T., Huebner K. Structure of the human receptor tyrosine phosphatase gamma gene (PTPRG) and relation to the familial RCC t(3;8) chromosome translocation. Genomics. 32:1996;225-235.
9. Ohta M., Inoue H., Cotticelli M.G., Kastury K., Baffa R., Palazzo J., Siprashvili Z., Mori M., McCue P., Druck T., Croce C.M., Huebner K. The FHIT gene, spanning the chromosome 3p14.2 fragile site and renal carcinoma-associated t(3;8) breakpoint, is abnormal in digestive tract cancers. Cell. 84:1996;587-597.
10. van der Hout A.H., van der Vlies P., Wijmenga C., Li F.P., Oosterhuis J.W., Buys C.H.C.M. The region of common allelic losses in sporadic renal cell carcinoma is bordered by the loci D3S2 and THRB. Genomics. 11:1991;537-542.
11. World Health Organization (1981): Histological Typing of Kidney Tumors. Springer-Verlag, Heidelberg, pp. 15-18.
12. Hermanek P, Sobin LH (1987): TMN classification of malignant tumors. In: Kidney. 4th Ed., Springer-Verlag, pp. 136-138.
13. Sato T., Tanigami A., Yamakawa K., Akiyama K., Kasumi F., Sakamoto G., Nakamura Y. Allelotype of breast cancer. cumulative allele losses promote tumor progression in primary breast cancer Cancer Res. 50:1990;7184-7189.
14. Kimura M., Abe T., Sunamura M., Matsuno S., Horii A. Detailed deletion mapping on chromosome arm 12q in human pancreatic adenocarcinoma. identification of a 1-cM region of common allelic loss Genes Chromosome Cancer. 17:1996;88-93.
15. Gyapay G., Morissette J., Vignal A., Dibb C., Fizames C., Millasseau P., Marc S., Bernardi G., Lathrop M., Weissenbach J. The 1993-94 Genethon human genetic linkage map. Nat Genet. 7:1994;246-339.
16. Naylor S.L., Buys C.H.C.M., Carritt B. Report of the fourth international workshop on human chromosome 3 mapping. Cytogenet Cell Genet. 65:1994;2-33.
17. Horii A., Han H.-J., Shimada M., Yanagisawa A., Kato Y., Ohta H., Yasui W., Tahara E., Nakamura Y. Frequent replication errors at microsatellite loci in tumors of patients with multiple primary cancers. Cancer Res. 54:1994;3373-3375.
18. Olson M.V., Loughney K., Hall B.D. Identification of yeast DNA sequences that correspond to specific tyrosine-inserting nonsense suppressor loci. J Mol Biol. 132:1979;387-410.
19. Ariyama T., Inazawa J., Ezaki T., Nakamura Y., Horii A., Abe T. High-resolution cytogenetic mapping of the short arm of chromosome 1 with newly isolated 411 cosmid markers by fluorescence in situ hybridization. the precise order of 18 markers on 1p36.1 on prophase chromosomes and "stretched" DNAs Genomics. 25:1995;114-123.
20. Fukushige S., Waldman F.M., Kimura M., Abe T., Furukawa T., Sunamura M., Kobari M., Horii A. Frequent gain of copy number on the long arm of chromosome 20 in human pancreatic adenocarcinoma. Genes Chromosom Cancer. 17:1997;161-169.
21. Gemmill R.M., Chumakov I., Scott P., Waggoner B., Rlgault P., Cypser J., Chen Q., Weissenbach J., Gardiner K., Wang H., Pekarsky Y., Gall I.L., Paslier D.L., Guillou S., Li E., Robinson L., Hahner L., Todd S., Cohen D., Drabkin H.A. A second-generation YAC contig map of human chromosome 3. Nature. 377:1995;299-319.
22. Naylor S.L., Moore S., Garcia D., Xiang X., Xin X., Mohrer M., Reus B., Linn R., Stanton V., O'Connell P., Leach R.L. Mapping 638 STSs to regions of human chromosome 3. Cytogenet Cell Genet. 72:1996;90-94.
23. Seizinger B.R., Roulea G.A., Ozelius L.J., Lane A.H., Farmer G.E., Lamiell J.M., Haines J., Yuen J.W., Collins D., Majoor-Krakauer D., Bonner T., Matthew C., Rubenstein A., Halperin J., McConkie-Rosell A., Green J.S., Trofatter J.A., Ponder B.A., Eierman L., Bowmer M.I., Schimke R., Oostra B., Aronin N., Smith D.I., Drabkin H., Waziri M.H., Hobbs W.J., Martuza R.L., Conneally P.M., Hsia Y.E., Gusella J.F. Von Hippel-Lindau disease maps to the region of chromosome 3 associated with renal cell carcinoma. Nature. 332:1988;268-269.
24. Vance J.M., Small K.W., Jones M.A., Stajich J.M., Yamaoka L.H., Roses A.D., Hung W.Y., Pericak-Vance M.A. Confirmation of linkage in von Hippel-Lindau disease. Genomics. 6:1990;565-567.
25. Hosoe S., Brauch H., Latif F., Glenn G., Daniel L., Bale S., Choyke P., Gorin M., Oldfield E., Berman A., Goodman J., Orcutt M.L., Hampsch K., Delisio J., Modi W., McBride W., Anglard P., Weiss G., Walther M.M., Linehan W.M., Lerman M.I., Zbar B. Localization of the von Hippel-Lindau disease gene to a small region of chromosome 3. Genomics. 8:1990;634-640.
26. Ogawa O., Kakehi Y., Ogawa K., Koshiba M., Sugiyama T., Yoshida O. Allelic loss at chromosome 3p characterizes clear cell phenotype of renal cell carcinoma. Cancer Res. 51:1991;949-953.
27. Yamakawa K., Takahashi T., Horio Y., Murata Y., Takahashi E., Hibi K., Yokoyama S., Ueda R., Takahashi T., Nakamura Y. Frequent homozygous deletions in lung cancer cell lines detected by a DNA marker located at 3p21.3-p22. Oncogene. 8:1993;327-330.
28. Han H.-J., Yanagisawa A., Kato Y., Park J.G., Nakamura Y. Genetic instability in pancreatic cancer and poorly differentiated type of gastric cancer. Cancer Res. 53:1993;5087-5089.
29. Uchida T., Wada C., Wang C., Egawa S., Ohtani H., Koshiba K. Genomic instability of microsatellite repeats and mutations of H-, K-, and N-ras, and p53 genes in renal cell carcinoma. Cancer Res. 54:1994;3682-3685.