The path of the growing peptide chain through the 23S rRNA in the 50S ribosomal subunit; A comparative cross-linking study with three different peptide families

Nucleic Acids Research

Volumn 26, Issue 4, 1998, Pages 887-895

  Choi, Kyoung Moo ^a   Brimacombe, Richard ^a  

^a MAX PLANCK INSTITUTE FOR MOLECULAR GENETICS   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDYLTRANSFERASE; RNA 23S; SIGNAL PEPTIDE;

ARTICLE; BACTERIOPHAGE T4; CROSS LINKING; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; RIBOSOME SUBUNIT;

AMINO ACID SEQUENCE; BACTERIAL OUTER MEMBRANE PROTEINS; BASE SEQUENCE; CROSS-LINKING REAGENTS; ESCHERICHIA COLI; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PEPTIDE BIOSYNTHESIS; PEPTIDES; PROTEIN FOLDING; PROTEIN SORTING SIGNALS; RIBOSOMES; RNA, BACTERIAL; RNA, MESSENGER; RNA, RIBOSOMAL, 23S;

EID: 0032519376     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.4.887     Document Type: Article

References (41)

1. Das, B., Chattopadhyay, S., Bera, A. K. and Dasgupta, C. (1996) Eur. J. Biochem., 235, 613-621.
2. Kudlicki, W., Coffman, A., Kramer, G. and Hardesty, B. (1997) Folding & Design, 2, 101-108.
3. Chattopadhyay, S., Das, B. and Dasgupta, C. (1996) Proc. Natl. Acad. Sci. USA, 93, 8284-8287.
4. Lorrimer, G. H. (1996) FASEB J., 10, 5-9.
5. Fedorov, A. N. and Baldwin, T. O. (1995) Proc. Natl. Acad. Sci. USA, 92, 1227-1231.
6. Kudlicki, W., Chirgwin, J., Kramer, G. and Hardesty, B. (1995) Biochemistry, 34, 14284-14287.
7. Makeyev, E. V., Kolb, V. A. and Spirin, A. S. (1996) FEBS Lett., 378, 166-170.
8. Malkin, L. I. and Rich, A. (1967) J. Mol. Biol., 26, 329-346.
9. Blobel, G. and Sabatini, D. D. (1970) J. Cell Biol., 45, 130-145.
10. Stöffler, G. and Stöffler-Meilicke, M. (1986) In Hardesty, B. and Kramer, G. (eds) Structure, Function and Genetics of Ribosomes, Springer Verlag, New York, NY. pp. 28-46.
11. Bernabeu, C. and Lake, J. A. (1982) Proc. Natl. Acad. Sci. USA, 79, 3111-3115.
12. Ryabova, L. A., Selivanova, O. M., Baranov, V. I., Vasiliev, V. D. and Spirin, A. S. (1988) FEBS Lett., 226, 255-260.
13. Milligan, R. A. and Unwin, P. N. T. (1986) Nature, 319, 693-695.
14. Yonath, A., Leonard, K. R. and Wittmann, H. G. (1987) Science, 236, 813-816.
15. Crowley, K. S., Reinhart, G. D. and Johnson, A. E. (1993) Cell, 73, 1101-1115.
16. Stark, H., Mueller, F., Orlova, E. V., Schatz, M., Dube, P., Erdemir, T., Zemlin, F., Brimacombe, R. and van Heel, M. (1995) Structure, 3, 815-821.
17. Stark, H., Orlova, E. V., Rinke-Appel, J., Jünke, N., Mueller, F., Rodnina, M., Wintermeyer, W., Brimacombe, R. and van Heel, M. (1997) Cell, 88, 19-28.
18. Stade, K., Riens, S., Bochkariov, D. and Brimacombe, R. (1994) Nucleic Acids Res., 22, 1394-1399.
19. Stade, K., Jünke, N. and Brimacombe, R. (1995) Nucleic Acids Res., 23, 2371-2380.
20. Nassal, M. (1983) Liebigs Ann. Chem., 1983, 1510-1523.
21. Bochkariov, D. and Kogon, A. A. (1992) Anal. Biochem., 204, 90-95.
22. Sutcliffe, J. G. (1979) Cold Spring Harbor Symp. Quant. Biol., 43, 77-90.
23. Peden, K. W. (1983) Gene, 22, 277-280.
24. Movva, N. R., Nakamura, K. and Inouye, M. (1980) J. Biol. Chem., 255, 27-29.
25. Emr, S. C. and Silhavy, T. J. (1982) J. Cell Biol., 95, 689-696.
26. Weiss, R. B., Huang, W. M. and Dunn, D. M. (1990) Cell, 62, 117-126.
27. Gesteland, R. F., Weiss, R. B. and Atkins, J. F. (1992) Science, 257, 1640-1641.
28. Milligan, J. F., Groebe, D. R., Witherell, G. W. and Uhlenbeck, O. C. (1987) Nucleic Acids Res., 15, 8783-8798.
29. McPherson, M. J., Quirke, P. and Taylor, G. R. (1991) In Rickwood, D. and Hames, B. D. (eds) PCR; A Practical Approach. Oxford University Press, pp. 1-253.
30. Stade, K., Rinke-Appel, J. and Brimacombe, R. (1989) Nucleic Acids Res., 17, 9889-9908.
31. Rheinberger, H. J., Geigenmüller, U., Wedde, M. and Nierhaus, K. H. (1988) Methods Enzymol., 164, 658-670.
32. Mitchell, P., Stade, K., Osswald, M. and Brimacombe, R. (1993) Nucleic Acids Res., 21, 887-896.
33. Döring, T., Mitchell, P., Osswald, M., Bochkariov, D. and Brimacombe, R. (1994) EMBO J., 13, 2677-2685.
34. Moazed, D., Stern, S. and Noller, H. F. (1986) J. Mol. Biol., 187, 399-416.
35. Brimacombe, R. (1995) Eur. J. Biochem., 230, 365-383.
36. Vester, B. and Garrett, R. A. (1988) EMBO J., 7, 3577-3587.
37. Steiner, G., Kuechler, E. and Barta, A. (1988) EMBO J., 7, 3949-3955.
38. Vester, B. and Garrett, R. A. (1984) J. Mol. Biol., 179, 431-452.
39. Stöffler, G. and Stöffler-Meilicke, M. (1986) In Hardesty, B. and Kramer, G. (eds) Structure, Function and Genetics of Ribosomes. Springer Verlag, New York, pp. 28-46.
40. Bernabeu, C. and Lake, J. A. (1982) Proc. Natl. Acad. Sci. USA, 79, 3111-3115.
41. Harrod, R. and Lovett, P. S. (1995) Proc. Natl. Acad. Sci. USA, 92, 8650-8654.