Hydroxyl radical footprinting of DNA complexes of the ets domain of PU.1 and its comparison to the crystal structure

Biochemistry

Volumn 37, Issue 15, 1998, Pages 5129-5135

  Gross, Petra ^a   Arrowsmith, Cheryl H ^b   Macgregor Jr , Robert B ^a  

^a UNIVERSITY OF TORONTO   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

HYDROXYL RADICAL; TRANSCRIPTION FACTOR;

ALPHA HELIX; ARTICLE; BINDING SITE; CELL MATURATION; COMPLEX FORMATION; CRYSTAL STRUCTURE; CRYSTALLIZATION; DNA BINDING; DNA FOOTPRINTING; DNA PROTEIN COMPLEX; ENHANCER REGION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN SECONDARY STRUCTURE;

ANIMALS; BINDING SITES; CONSENSUS SEQUENCE; CRYSTALLOGRAPHY; DNA; DNA FOOTPRINTING; DNA-BINDING PROTEINS; HYDROXYL RADICAL; MICE; PEPTIDE FRAGMENTS; PLASMIDS; PROTEIN BINDING; PROTO-ONCOGENE PROTEINS; PROTO-ONCOGENE PROTEINS C-ETS; TRANS-ACTIVATORS; TRANSCRIPTION FACTORS;

MURINAE;

EID: 0032515936     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi972591k     Document Type: Article

References (20)

1. Wasylyk, B., Hahn S. L., and Giovane, A. (1993) Eur. J. Biochem. 211, 7-18.
2. Nye, J. A., Peterson J. M., Gunther, C. V., Jonsen, M. D., and Graves, B. J. (1992) Genes Dev. 6, 975-990.
3. Donaldson, L. W., Peterson, J. M., Graves, B., J., and McIntosh, L. P. (1996) EMBO J. 15, 125-143.
4. Liang, H., Olejniczak, E., T., Mao, X., Nettesheim, D. G., Yu, L. Thompson, C. B., and Fesik, S., W. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 11655-11659.
5. Kodandapani, R., Plo, F., Ni, C. Z., Piccialli, G., Klemesz, M., McKercher, S., Maki, R. A., and Ely, K. R. (1996) Nature 380, 456-460.
6. Werner, M. H., Clore, G. M., Fisher, C. L., Fisher, R. J., Trinh, L., Shiloach, J., and Gronenborn, A. M. (1995) Cell 83, 761-771; erratum (1996) Cell 87 (2).
7. Pio, F., Kodandapani, R., Ni, C.-Z., Shepard, W., Klemsz, M., McKercher, S. R., Maki, R. A., and Ely, K. R. (1996) J. Biol. Chem 271, 23329-23337.
8. Tullius, T. D., and Dombroski, B. A. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 5469-5473.
9. Tullius, T. D. (1988) Nature 332, 663-664.
10. Lee, S., and Hahn, S. (1995) Nature 376, 609-612.
11. Pongubala, J. M. R., Nagulapalli, S., Klemsz, M., McKercher, S. R., Maki, R. A., and Atchinson, M. L. (1992) Mol. Cell. Biol. 12, 368-378.
12. Eisenbeis, C. F., Singh, H., and Storb, U. (1993) Mol. Cell. Biol. 13, 6452-6461.
13. Maxam, A., and Gilbert, W. (1988) Methods Enzymol. 65, 499-560.
14. Cheng, X., Morin, P. E., Harms, A. C., Bruce, J. E., Ben-David, Y., and Smith R. D. (1996) Anal. Biochem. 239, 35-40.
15. Pio, F., Ni, C.-Z., Mitchell, R. S., Knight, J., McKercher, S., Klemsz, M., Lombardo, A., Maki, R. A., and Ely, K. R. (1995) J. Biol. Chem. 270, 24258-24263.
16. Ray-Gallet, D., Mao, C., Tavitian, A., and Moreau-Gachlin, F. (1995) Oncogene 11, 303-313.
17. Galson, D. L., Hensold, J. O., Bishop, T. R., Schalling, M., D'Andrea, A. D., Jones, C., Auron, P. E., and Housman, D. E. (1993) Mol. Cell. Biol. 13, 2929-2941.
18. Graves, B. J., Gillespie, M. E., and McIntosh, L. P., (1996) Nature 384, 322.
19. Rao, E., Dang, W., Tian, G., and Sen, R. (1997) J. Biol. Chem. 272, 6722-6732.
20. Gunther, C. V., and Graves, B. J. (1994) Mol. Cell. Biol. 14, 7569-7580.