Molecular cloning and characterzation of FHL2, a novel LIM domain protein preferentially expressed in human heart

Gene

Volumn 210, Issue 2, 1998, Pages 345-350

  Chan, Kwok Keung ^a   Wing Tsui, Stephen Kwok ^a   Lee, Simon Ming Yuen ^a   Luk, Sharon Chui Wah ^a   Liew, Choong Chin ^a,b   Fung, Kwok Pui ^a   Waye, Mary Miu Yee ^a   Lee, Cheuk Yu ^a  

^a CHINESE UNIVERSITY OF HONG KONG   (Hong Kong)

^b UNIVERSITY OF TORONTO   (Canada)

Author keywords

Chromosome 2; Heart cDNA; LIM domain protein; Zinc finger protein

Indexed keywords

COMPLEMENTARY DNA; POLYADENYLATED RNA; ZINC FINGER PROTEIN; FHL2 PROTEIN, HUMAN; HOMEODOMAIN PROTEIN; MUSCLE PROTEIN; TRANSCRIPTION FACTOR;

AMINO ACID SEQUENCE; ARTICLE; BRAIN; CHROMOSOME 2Q; COLON; DNA LIBRARY; DNA PROBE; DNA RNA HYBRIDIZATION; DNA SEQUENCE; FETUS; GENE MAPPING; HEART; KIDNEY; LEUKOCYTE; LIVER; LUNG; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OVARY; PANCREAS; PLACENTA; PRIORITY JOURNAL; PROSTATE; PROTEIN DOMAIN; PROTEIN EXPRESSION; SKELETAL MUSCLE; SMALL INTESTINE; SPLEEN; TESTIS; THYMUS; CHROMOSOME 2; CHROMOSOME MAP; GENE EXPRESSION; GENETICS; HEART MUSCLE; HUMAN; METABOLISM; MOLECULAR GENETICS; SEQUENCE HOMOLOGY; TISSUE DISTRIBUTION;

AMINO ACID SEQUENCE; BASE SEQUENCE; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN, PAIR 2; CLONING, MOLECULAR; DNA, COMPLEMENTARY; GENE EXPRESSION; HOMEODOMAIN PROTEINS; HUMANS; MOLECULAR SEQUENCE DATA; MUSCLE PROTEINS; MYOCARDIUM; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TISSUE DISTRIBUTION; TRANSCRIPTION FACTORS;

EID: 0032515886     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(97)00644-6     Document Type: Article

References (47)

1. Alonso M.A., Barton D.E., Francke U. Assignment of the T-cell differentiation gene MAL to human chromosome 2, region cen - q13. Immunogenetics. 27:1988;91-95.
2. Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 215:1990;403-410.
3. Arber S., Halder G., Caroni P. Muscle LIM protein, a novel essential regulator of myogenesis, promotes myogenic differentiation. Cell. 79:1994;221-231.
4. Arber S., Caroni P. Specificity of single LIM motifs in targeting and LIM/LIM interaction in situ. Genes Dev. 10:1996;289-300.
5. Arber S., Hunter J.J., Ross J., Hongo M., Sansig G., Borg J., Perriard J.-C., Chien K.R., Caroni P. MLP-deficient mice exhibit a disruption of cardiac cytoarchitectural organization, dilated cardiomyopathy and heart failure. Cell. 88:1997;393-403.
6. Barton D.E., Yang-Feng T.L., Mason A.J., Seeburg P.H., Francke U. Mapping of genes for inhibin subunits alpha, beta A, and beta B on human and mouse chromosomes and studies of jsd mice. Genomics. 5:1989;91-99.
7. Copeland N.G., Silan C.M., Kingsley D.M., Jenkins N.A., Cannizzaro L.A., Croce C.M., Huebner K., Sims J.E. Chromosomal location of murine and human IL-1 receptor genes. Genomics. 9:1991;44-50.
8. Dawid I.B., Toyama R., Taira M. LIM domain proteins. C.R. Acad. Sci. 318:1994;295-306.
9. Fung Y.W., Wang R.X., Liew C.C. Mapping of a human LIM protein (CLP) to human chromosome 11p15.1 by fluorescence in situ hybridization. Genomics. 28:1995;602-603.
10. Fung W.Y.W., Wang R., Liew C.C. Characterization of a human cardiac gene which encodes for a human LIM domain protein and is developmentally expressed in myocardial development. J. Mol. Cell. Cardiol. 28:1996;1203-1210.
11. Genini, M., Schwalbe, P., Mattei, M.-G., Schafer, B.W., 1996a. GenBank accession number L42176.
12. Genini M., Schwalbe P., Scholl F.A., Schafer B.W. Isolation of gene differentially expressed in human primary myoblasts and embryonal rhabomyosarcoma. Int. J. Cancer. 66:1996;571-577.
13. Heng H.H.Q., Squire J., Tsui L.C. High resolution mapping of mammalian genes by in situ hybridization to free chromatin. Proc. Natl. Acad. Sci. USA. 89:1992;9509-9513.
14. Heng H.H.Q., Tsui L.C. Modes of DAPI banding and simultaneous in situ hybridization. Chromosoma. 103:1993;325-332.
15. Hildebrandt F., Singh-Sawhney I., Schnieders B., Papenfuss T., Brandis M. Refined genetic mapping of a gene for familial juvenile nephronophthisis (NPH1) and physical mapping of linked markers. Genomics. 25:1995;360-364.
16. Hsieh C.L., Swaroop A., Francke U. Chromosomal localization and cDNA sequence of human ralB, a GTP binding protein. Somat. Cell. Mol. Genet. 16:1990;407-410.
17. Hwang D.M., Fung Y.W., Wang R.X., Laurenssen C.M., Ng S.H., Lam W.Y., Tsui K.W., Fung K.P., Waye M., Lee C.Y., Liew C.C. Analysis of expressed sequence tags from a fetal human heart cDNA library. Genomics. 30:1995;293-298.
18. Jain M.K., Fujita K.P., Hsieh C.M., Endege W.O., Sibinga N.E.S., Yet S.F., Kashiki S., Lee W.S., Perrella M.A., Haber E., Lee M.E. Molecular cloning and characterization of SmLIM, a developmentally regulated LIM protein preferentially expressed in aortic smooth muscle cells. J. Biol. Chem. 271:1996;10194-10199.
19. Kaelbling M., Eddy R., Shows T.B., Copeland N.G., Gilbert D.J., Jenkins N.A., Klinger H.P., O'Hara B. Localization of the human gene allowing infection by gibbon ape leukemia virus to human chromosome region 2q11-q14 and to the homologous region on mouse chromosome 2. J. Virol. 65:1991;1743-1747.
20. Kohler A., Logan C., Joyner A.L., Muenke M. Regional assignment of the human homeobox-containing gene EN1 to chromosome 2q13-q21. Genomics. 15:1993;233-235.
21. Kong Y., Flick M.J., Kudla A.J., Konieczny S.F. Muscle LIM protein promotes myogenesis by enhancing the activity of MyoD. Mol. Cell. Biol. 17:1997;4750-4760.
22. Ku G., Malissen B., Mattei M.G. Chromosomal location of the Syk and ZAP-70 tyrosine kinase genes in mice and humans. Immunogenetics. 40:1994;300-302.
23. Lafage M., Maroc N., Dubreuil P., de Waal Malefijt R., Pebusque M.J., Carcassonne Y., Mannoni P. The human interleukin-1-alpha gene is located on the long arm of chromosome 2 at band q13. Blood. 73:1989;104-107.
24. Lee M.S., Gippert G.P., Soman K.V., Case D.A., Wright P.E. Three-dimensional solution structure of a single zinc finger DNA-binding domain. Science. 254:1989;635-637.
25. Liebhaber S.A., Emery J.G., Urbanek M., Wang X., Cooke N.E. Characterization of a human cDNA encoding a widely expressed and highly conserved cysteine-rich protein with an unusual zinc-finger motif. Nucleic Acids Res. 18:1990;3871-3879.
26. Liew C.C., Hwang D.M., Fung Y.W., Laurenssen C., Cukerman E., Tsui S., Lee C.Y. A catalogue of genes in the cardiovascular system identified by expressed sequence tags (ESTs). Proc. Natl. Acad. Sci. USA. 91:1994;10645-10649.
27. Lomax M.I., Hsieh C.L., Darras B.T., Francke U. Structure of the human cytochrome c oxidase subunit Vb gene and chromosomal mapping of the coding gene and of seven pseudogenes. Genomics. 10:1991;1-9.
28. Macalma T., Otte J., Hensler M.E., Bockholt S.M., Louis H.A., Kalff-Suske M., Grzeschik K.H., von der Ahe D., Beckerle M.C. Molecular characterization of human zyxin. J. Biol. Chem. 271:1996;31470-31478.
29. McMahan C.J., Slack J.L., Mosley B., Cosman D., Lupton S.D., Brunton L.L., Grubin C.E., Wignall J.M., Jenkins N.A., Brannan C.I., Copeland N.G., Huebner K., Croce C.M., Cannizzarro L.A., Benjamin D., Dower S.K., Spriggs M.K., Sims J.E. A novel IL-1 receptor, cloned from B cells by mammalian expression, is expressed in many cell types. EMBO J. 10:1991;2821-2832.
30. Michelsen J.W., Schmeichel K.L., Beckerle M.C., Wine D.R. The LIM motif defines a specific zinc-binding protein domain. Proc. Natl. Acad. Sci. USA. 90:1993;4404-4408.
31. Mocchetti I. Molecular biology of diazepam binding inhibitor peptide. Neurochem. Res. 15:1990;125-130.
32. Morgan M.J., Madgwick A.J., Charleaton B., Pell J.M., Loughna P.T. The developmental regulation of a novel muscle LIM-protein. Biochem. Biophys. Res. Commun. 212:1995;840-846.
33. Morgan, M.J., Madgwick, A.J., 1996a. GenBank accession number U60117.
34. Morgan M.J., Madgwick A.J. Slim defines a novel family of LIM-proteins expressed in skeletal muscle. Biochem. Biophys. Res. Commun. 225:1996;632-638.
35. Ozcelik T., Suedhof T.C., Francke U. Chromosomal assignments of genes for vacuolar (endomembrane) proton pump subunits VPP1/Vpp-1 (116 kDa) and VPP3/Vpp-3 (58 kDa) in human and mouse. Cytogenet. Cell. Genet. 58:1991;2008-2009.
36. Pallotta R. Iris coloboma, ptosis, hypertelorism, and mental retardation: a new syndrome possibly localised on chromosome 2. J. Med. Genet. 28:1991;342-344.
37. Parraga G., Horvath S.J., Eisen A., Taylor W.E., Hood L., Young E.T., Klevit R.E. Zinc-dependent structure of a single-finger domain of yeast ADR1. Science. 241:1988;1489-1492.
38. Patracchini P., Aiello V., Palazzi P., Calzolari E., Bernardi F. Sublocalization of the human protein C gene on chromosome 2q13-q14. Hum. Genet. 81:1989;91-92.
39. Rearden A. A new LIM protein containing an autoepitope homologous to 'senescent cell antigen'. Biochem. Biophys. Res. Commun. 201:1994;1124-1131.
40. BCR/ABL. J. Biol. Chem. 270:1995;5039-5047.
41. Sanchez-Garcia I., Rabbitts T.H. The LIM domain: a new structural motif found in zinc-finger-like proteins. Trends Genet. 10:1994;315-320.
42. Srivastava M., McBride O.W., Fleming P.J., Pollard H.B., Burns A.L. Genomic organization and chromosomal localization of the human nucleolin gene. J. Biol. Chem. 265:1990;14922-14931.
43. Stapleton P., Weith A., Urbanek P., Kozmik Z., Busslinger M. Chromosomal localization of seven PAX genes and cloning of a novel family member, PAX-9. Nature Genet. 3:1993;292-298.
44. Tsui S.K.W., Yam N.Y.H., Lee C.Y., Waye M.M.Y. Isolation and characterization of a cDNA that codes for a LIM-containing protein which is developmentally regulated in heart. Biochem. Biophys. Res. Commun. 205:1994;497-505.
45. Tsui S.K.W., Waye M.M.Y., Lee C.Y. Efficient automated sequencing of unpurified polymerase chain reaction products. BioTechniques. 19:1995;577-578.
46. Tsui S.K.W., Chan P.P.K., Cheuk C.W., Liew C.C., Waye M.M.Y., Fung K.P., Lee C.Y. A novel cDNA encoding for a LIM domain protein located at human chromosome 14q32 as a candidate for leukemic translocation. Biochem. Mol. Biol. Int. 39:1996;747-754.
47. Webb A.C., Collins K.L., Auron P.E., Eddy R.L., Nakai H., Byers M.G., Haley L.L., Henry W.M., Shows T.B. Interleukin-1 gene (IL1) assigned to long arm of human chromosome 2. Lymphokine Res. 5:1986;77-85.