On the thermodynamic hypothesis of protein folding

Proceedings of the National Academy of Sciences of the United States of America

Volumn 95, Issue 10, 1998, Pages 5545-5549

  Govindarajan, Sridhar ^a   Goldstein, Richard A ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

Folding kinetics; Folding simulation; Lattice models; Protein evolution

Indexed keywords

ALGORITHM; AMINO ACID SEQUENCE; CONFERENCE PAPER; EVOLUTION; HYPOTHESIS; NONHUMAN; POINT MUTATION; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FOLDING; THERMODYNAMICS;

EID: 0032510675     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.95.10.5545     Document Type: Article

References (35)

1. Levinthal, C. (1969) in Mossbauer Spectroscopy in Biological Systems, eds. Debrunner, P., Tsibris, J. C. M. & Munck, E. (Univ. of Illinois Press, Urbana), pp. 22-24.
2. Levinthal, C. (1968) J. Chim. Phys 65, 44-45.
3. Anfinsen, C. (1973) Science 181, 223-230.
4. Kim, P. S. & Baldwin, R. L. (1990) Annu. Rev. Biochem. 59, 631-660.
5. Dill, K. A. (1990) Biochem. 29, 7133-7155.
6. Berkenpas, M. B., Lawrence, D. A. & Ginsburg, D. (1995) EMBO J. 14, 2969-2977.
7. Thomas, P. J., Qu, B. & Pederson, P. L. (1995) Trends Biochem. Sci. 20, 456-459.
8. Mitraki, A., Fane, B., Haase-Pettingell, C., Sturtevant, J. & King, J. (1991) Science 253, 54-58.
9. Baker, D., Sohl, J. L. & Agard, D. A. (1992) Science 356, 263-265.
10. Honeycutt, J. D. & Thirumalai, D. (1990) Proc. Natl. Acad. Sci. USA 87, 3526-3529.
11. Šali, A., Shakhnovich, E. I. & Karplus, M. J. (1994) J. Mol. Biol. 235, 1614-1636.
12. Šali, A., Shakhnovich, E. I. & Karplus, M. J. (1994) Nature (London) 369, 248-251.
13. Bryngelson, J. D. & Wolynes. P. G. (1990) Biopolymers 30, 171-188.
14. Goldstein, R. A., Luthey-Schulten, Z. A. & Wolynes, P. G. (1992) Proc. Natl. Acad. Sci. USA 89, 4918-4922.
15. Gutin, A. M., Abkevich, V. I. & Shakhnovich, E. I (1995) Proc. Natl. Acad. Sci. USA 92, 1282-1286.
16. Leopold, P. E., Montal, M. & Onuchic. J. N. (1992) Proc. Natl. Acad. Sci. USA 89, 8721-8725.
17. Bryngelson, J. D., Onuchic, J. N., Socci, N. D. & Wolynes, P. G. (1995) Proteins 21, 167-195.
18. Dill, K. A. & Chan, H. S. (1997) Nat. Struct. Biol. 4, 10-19.
19. Socci, N. D., Onuchic, J. N. & Wolynes, P. G. (1996) J. Chem. Phys. 104, 5860-5868.
20. Onuchic, J. N., Luthey-Schulten, Z. & Wolynes, P. G. (1997) Annu. Rev. Phys. Chem. 48, 545-600.
21. Plotkin, S. S., Wang, S. & Wolynes, P. G. (1997) J. Chem. Phys. 106, 2932-2948.
22. Miyazawa, S. & Jernigan, R. L. (1985) Macromolecules 18, 534-552.
23. Socci, N. D. & Onuchic, J. N. (1994) J. Chem. Phys. 101, 1519-1528.
24. Derrida, B. (1980) Phys. Rev. Lett. 45, 79-82.
25. Bryngelson, J. D. & Wolynes, P. G. (1987) Proc. Natl. Acad. Sci. USA 84, 7524-7528.
26. Pande, V. S., Grosberg, A. Y. & Tanaka, T. (1994) J. Chem. Phys. 101, 8246-8257.
27. Pande, V. S., Grosberg, A. Y. & Tanaka, T. (1994) Proc. Natl. Acad. Sci. USA 91, 12972-12975.
28. Bai, Y. & Englander, S. W. (1996) Proteins 24, 145-151.
29. Onuchic, J. N., Wolynes, P. G., Luthey-Schulten, Z. & Socci, N. D. (1995) Proc. Natl. Acad. Sci. USA 92, 3626-3630.
30. Saito, S., Sasai, M. & Yomo, T. (1997) Proc. Natl. Acad. Sci. USA 94, 11324-11328.
31. Bowie, J. U., Luthy, R. & Eisenberg, D. (1991) Science 253, 164-170.
32. Jones, D. T., Taylor, W. R. & Thornton, J. M (1992) Nature (London) 358, 86-89.
33. Dandekar, T. & Argos, P. (1992) Protein Eng. 5, 637-645.
34. Sun, S. (1993) Protein Sci. 2, 762-785.
35. Scheraga, H. A. (1996) Biophys. Chem. 59, 329-339.