Kinetic properties of DNA migration under clamped homogeneous electric field conditions. DNA size, migration velocities and reorientation time determined in a single clamped homogeneous electric field run

Journal of Chromatography A

Volumn 806, Issue 1, 1998, Pages 123-139

  Lopez Canovas, L ^a   Galan, L ^a   Orozco, E ^b,c   Riveron, A M ^a,c  

^a Neurosci Br Natl Ctr Sci R   (Cuba)

^b DEPARTAMENTO DE FÍSICA   (Mexico)

^c INSTITUTO POLITÉCNICO NACIONAL   (Mexico)

Author keywords

Clamped homogeneous electric field; DNA; DNA reorientation time; Kinetic studies; Migration velocities; Validation

Indexed keywords

DNA;

ARTICLE; CLAMPED HOMOGENEOUS ELECTRIC FIELD; DNA DETERMINATION; NONHUMAN; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; SACCHAROMYCES CEREVISIAE; VELOCITY;

EID: 0032496211     PISSN: 00219673     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0021-9673(97)01122-9     Document Type: Article

References (37)

1. Schwartz D.C., Cantor C. Cell. 37:1984;67.
2. B. Birren and E. Lai, Pulsed Fields Gel Electrophoresis: A Practical Guide, Academic Press, New York, 1993, pp. 107, 111, 129, 131, 135.
3. Gurrieri S., Rizzarelli E., Beach D., Bustamante C. Biochemistry. 29:1990;3396.
4. Bustamante C., Gurrieri S., Smith S.B. Tibtech. 11:1993;23.
5. Riveron A.M., Higginson D., Lopez-Canovas L., Perez G., Garcia H.M., Reyes M., Manresa R. Studia Biophys. 133:1989;73.
6. Chu G. Proc. Natl. Acad. Sci. USA. 88:1991;11071.
7. Riveron A.M., Lopez-Canovas L., Herrera J.A., Ruiz L., Higginson D., Noa M.D., Valdes F. Arch. Med. Res. 25:1994;193.
8. M. Burmeister and L. Ulanovsky (Editors), Methods in Molecular Biology, Vol. 12: Pulsed-Field Gel Electrophoresis. Protocols, Methods and Theories, Part IV: Theories and Observations, Humana Press, Totowa, NJ, 1992, pp. 347-467.
9. Lumpkin O.J., Dejardin P., Zimm B.H. Biopolymers. 24:1985;1573.
10. L. Lopez-Canovas, R. Biscay, M.D. Noa, E. Orozco and A.M. Riveron, J. Chromatogr. A (1998) in press.
11. Lumpkin O.J., Zimm B.H. Biopolymers. 21:1982;2315.
12. Southern E.M., Anand R., Brown W.R.A., Fletcher D.S. Nucl. Acids Res. 15:1987;5925.
13. W.H. Press, B.P. Flannery, S.A. Teukolsky and W.T. Vetterling, Numerical Recipes in PASCAL, Press Syndicate of the University of Cambridge, Cambridge, 1989, pp. 548-598.
14. Norden B., Elvingson Ch., Jonsson M., Akerman B. Quart. Rev. Biophys. 24:1991;103.
15. Zimm B.H., Levene S.D. Quart. Rev. Biophys. 25:1992;171.
16. Oana H., Masubuchi Y., Matsumoto M., Doi M., Matsuzawa Y., Yoshikawa K. Macromolecules. 27:1994;6061.
17. Akerman B. Electrophoresis. 17:1996;1027.
18. Calladine C.R., Collis C.M., Drew H.R., Mott M.R. J. Mol. Biol. 221:1991;981.
19. Goffeau A., Barrell B.G., Bussey H., Davis R.W., Dujon B., Feldmann H., Galibert F., Hoheisel J.D., Jacq C., Johnston M., Louis E.J., Mewes H.W., Murakami Y., Philippsen P., Tettelin H., Oliver S.G. Science. 274:1996;546.
20. Riveron A.M., Lopez-Canovas L., Herrera J.A., Baez-Camargo M., Higginson D., Orozco E. Anal. Lett. 28:1995;1973.
21. Lopez-Canovas L., Higginson D., Orozco E., Riveron A.M. Anal. Lett. 29:1996;2079.
22. Chu G., Vollrath D., Davis R.W. Science. 234:1986;1582.
23. Reyes M., Riveron A.M., Martinez R., Perez G. Rev. CNIC. Ciencias Biologicas. 21:1990;40.
24. Riverón A.M., Herrera J.A., Ruiz-Esquivel L., Báez-Camargo M., López-Cánovas L., Noa M.D., Orozco E. Anal. Lett. 28:1995;845.
25. R.C. Weast (editor), Handbook of Chemistry and Physics, CRC Press, 57th ed., 1976-1977, CRC Press, Cleveland, OH, p. F-49.
26. J. Sambrook, E.F. Fritsch and T. Maniatis, Molecular Cloning-A Laboratory Manual, Cold Spring Harbor Laboratory Press, New York, 2nd ed., 1989, Book 2, pp. 9.38, 9.52, 10.6.
27. Gurrieri S., Smith S.B., Wells K.S., Johnson I.D., Bustamante C. Nucl. Acids Res. 24:1996;4759.
28. Lee N., Obukhov S., Rubinstein M. Electrophoresis. 17:1996;1011.
29. Hervet H., Bean C.P. Biopolymers. 26:1987;727.
30. Cantor C.R., Smith C.L., Mathew M.K. Ann. Rev. Biophys. Chem. 17:1988;287.
31. Schellman J.A., Stigter D. Biopolymers. 16:1977;1415.
32. Stigter D. Biopolymers. 31:1991;169.
33. Carlsson Ch., Jonsson M. Macromolecules. 29:1996;7802.
34. Gunderson K., Chu G. Mol. Cell. Biol. 11:1991;3348.
35. Hutson M.S., Holzwarth G., Duke T., Viovy J.L. Biopolymers. 35:1995;297.
36. Whitcomb R.W., Holzwarth G. Nucl. Acids Res. 18:1991;6331.
37. Smith S.B., Heller C., Bustamante C. Biochemistry. 30:1991;5264.