Structural basis of DNA recognition and mechanism of quadruplex formation by the β subunit of the Oxytricha telomere binding protein

Biochemistry

Volumn 37, Issue 5, 1998, Pages 1327-1335

  Laporte, Laurent ^a   Thomas Jr , George J ^a  

^a UNIVERSITY OF MISSOURI KANSAS CITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; DNA; GUANINE; HETERODUPLEX; TRYPTOPHAN;

ARTICLE; BETA CHAIN; CILIATE; DNA SEQUENCE; DNA STRUCTURE; FLUORESCENCE SPECTROSCOPY; HYDROGEN BOND; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN SECONDARY STRUCTURE; TELOMERE;

ANIMALS; DNA-BINDING PROTEINS; GUANINE; MACROMOLECULAR SUBSTANCES; NUCLEAR PROTEINS; NUCLEIC ACID CONFORMATION; OLIGONUCLEOTIDES; OXYTRICHA; POLYMORPHISM, GENETIC; REPETITIVE SEQUENCES, NUCLEIC ACID; SPECTROMETRY, FLUORESCENCE; SPECTRUM ANALYSIS, RAMAN; THYMINE;

CILIOPHORA; OXYTRICHA; STERKIELLA NOVA;

EID: 0032477893     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi972400d     Document Type: Article

References (39)

1. Blackburn, E. H. (1994) Cell 77, 621-623.
2. Blackburn, E. H., and Greider, C. W., Eds. (1995) The Telomeres, CSHL Press, Cold Spring Harbor, New York.
3. Lundblad, V., and Szostak, J. W. (1989) Cell 57, 633-643.
4. Sandell, L. L., and Zakian, V. A. (1993) Cell 75, 729-739.
5. Sen, D., and Gilbert, W. (1990) Nature 344, 410-414.
6. Price, C. M., and Cech, T. R. (1987) Gen. Dev. 783-793.
7. Raghuraman, M. K., and Cech, T. R. (1989) Cell 59, 719-728.
8. Smith, F. W., and Feigon, J. (1993) Biochemistry 32, 8682-8692.
9. Wang, Y., and Patel, D. (1995) J. Mol. Biol. 251, 76-94.
10. Laughlin, G., Murchie, A. I. H., Norman, D. G., Moore, M. H., Moody, P. C. E., Lilley, D. M. J., and Luisi, B. (1994) Science 356, 520-524.
11. Kang, C. H., Zhang, X., Ratliff, R., Moyzis, R., and Rich, A. (1992) Nature 356, 126-131.
12. Miura, T., and Thomas, G. J., Jr. (1995) Biochemistry 34, 9645-9654.
13. Raghuraman, M. K., and Cech, T. R. (1990) Nucleic Acids Res. 18, 4543-4552.
14. Price, C. M., and Cech, T. R. (1989) Biochemistry 28, 769-774.
15. Price, C. M., Skopp, R., Krueger, J., and Williams, D. (1992) Biochemistry 31, 10835-10843.
16. Zhong, Z., Shiue, L., Kaplan, S., and de Lange, T. (1992) Mol. Cell. Biol. 12, 4834-4843.
17. Fang, G., and Cech, T. R. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 6056-6060.
18. Fang, G., and Cech, T. R. (1993) Biochemistry 32, 11646-11657.
19. Fang, G., and Cech, T. R. (1993) Cell 74, 875-885.
20. Laporte, L., Stultz, J., and Thomas, G. J, Jr. (1997) Biochemistry 36, 8053-8059.
21. Thomas, G. J., Jr., and Barylski, J. R. (1970) Appl. Spectrosc. 24, 463-464.
22. Lakowicz, J. R. (1983) Principles of Fluorescence Spectroscopy, Plenum Press, New York.
23. Miura, T., and Thomas, G. J., Jr. (1995) in Subcellular Biochemistry, Volume 24. Proteins: Structure, Function, and Engineering (Biswas, B. B., and Roy, S., Eds.) pp 55-99, Plenum Press, New York.
24. Siamwiza, M. N., Lord, R. C., Chen, M. C., Takamatsu, T., Harada, I., Matsuura, H., and Shimanouchi, T. (1975) Biochemistry 14, 4870-4876.
25. Erfurth, S. C., Kiser, E. J., and Peticolas, W. L. (1972) Proc. Natl. Acad. Sci. U.S.A. 69, 938-941.
26. Prescott, B., Steinmetz, W., and Thomas, G. J., Jr. (1984) Biopolymers 23, 235-256.
27. Miura, T., and Thomas, G. J., Jr. (1994) Biochemistry 33, 7848-7856.
28. Thomas, G. J., Jr., and Tsuboi, M. (1993) Adv. Biophys. Chem. 3, 1-70.
29. Nishimura, Y., Tsuboi, M., Kato, S., and Morokuma, K. (1985) Bull. Chem. Soc. Jpn. 58, 638-643.
30. Duguid, J., Bloomfield, V., Benevides, J. M., and Thomas, G. J., Jr. (1993) Biophys. J. 65, 1916-1928.
31. Laporte, L., and Thomas, G. J., Jr. (1997) Submitted for publication.
32. Miura, T., Benevides, J. M., and Thomas, G. J., Jr. (1995) J. Mol. Biol. 248, 233-238.
33. Benevides, J. M., Weiss, M. A., and Thomas, G. J., Jr. (1991) Biochemistry 30, 5955-5963.
34. Benevides, J. M., Kukolj, G., Autexier, C., Aubrey, K. L., DuBow, M. S., and Thomas, G. J., Jr. (1994) Biochemistry 33, 10701-10710.
35. Thomas, G. J., Jr., and Benevides, J. M. (1985) Biopolymers 24, 1101-1105.
36. Takeuchi, H., Watanabe, N., and Harada, I. (1986) Spectrochim. Acta 44A, 749-761.
37. Miura, T., Takeuchi, H., and Harada, I. (1991) Biochemistry 30, 6074-6080.
38. Kelly, R. C., and von Hippel, P. H. (1976) J. Biol. Chem. 251, 7229-7239.
39. Gupta, G., Garcia, A. E., Guo, Q., Lu, M., and Kallenbach, N. (1993) Biochemistry 32, 3596-3603.