메뉴 건너뛰기




Volumn 63, Issue , 1998, Pages 327-336

Structure and mechanism in transcriptional antitermination by the bacteriophage λ N protein

Author keywords

[No Author keywords available]

Indexed keywords

GUANINE NUCLEOTIDE BINDING PROTEIN; BACTERIAL PROTEIN; BACTERIOPHAGE LAMBDA N PROTEIN; RNA POLYMERASE; SERINE ARGININE RICH PROTEIN; SHORT HAIRPIN RNA; UNCLASSIFIED DRUG;

EID: 0032459209     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.1998.63.327     Document Type: Conference Paper
Times cited : (22)

References (38)
  • 2
    • 0029002685 scopus 로고
    • NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator
    • Bums C. and Richardson J.P. 1995. NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator. Proc. Natl. Acad. Sci. 92: 4738.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 4738
    • Bums, C.1    Richardson, J.P.2
  • 3
    • 0031471204 scopus 로고    scopus 로고
    • The solution structure of the S1 RNA binding domain: A member of an ancient nucleic acid-binding fold
    • Bycroft M., Hubbard T.J., Proctor M., Freund S.M., and Murzin A.G. 1997. The solution structure of the S1 RNA binding domain: A member of an ancient nucleic acid-binding fold. Cell 88: 235.
    • (1997) Cell , vol.88 , pp. 235
    • Bycroft, M.1    Hubbard, T.J.2    Proctor, M.3    Freund, S.M.4    Murzin, A.G.5
  • 5
    • 0029007110 scopus 로고
    • Bipartite function of a small RNA hairpin in transcription antitermination in bacteriophage X
    • Chattopadhyay S., Garcia-Mena J., DeVito J., Wolska K., and Das A. 1995. Bipartite function of a small RNA hairpin in transcription antitermination in bacteriophage X. Proc. Natl. Acad. Sci. 92: 4061.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 4061
    • Chattopadhyay, S.1    Garcia-Mena, J.2    DeVito, J.3    Wolska, K.4    Das, A.5
  • 6
    • 0031024660 scopus 로고    scopus 로고
    • Analysis of bacteriophage N protein and peptide binding to boxB using polyacrylamide gel coelectrophoresis (PACE)
    • Cilley C.D. and Williamson J.R. 1997. Analysis of bacteriophage N protein and peptide binding to boxB using polyacrylamide gel coelectrophoresis (PACE). RNA 3: 57.
    • (1997) RNA , vol.3 , pp. 57
    • Cilley, C.D.1    Williamson, J.R.2
  • 7
    • 0025973278 scopus 로고
    • Analysis of the Escherichia coli NusA 10(Cs) allele: Relating nucleotide changes to phenotypes
    • Craven M.G. and Friedman D.I. 1991. Analysis of the Escherichia coli NusA 10(Cs) allele: Relating nucleotide changes to phenotypes. J. Bacteriol. 173: 1485.
    • (1991) J. Bacteriol. , vol.173 , pp. 1485
    • Craven, M.G.1    Friedman, D.I.2
  • 8
    • 0027321585 scopus 로고
    • Control of transcription termination by RNA-binding proteins
    • Das A. 1993. Control of transcription termination by RNA-binding proteins. Annu. Rev. Biochem. 62: 893.
    • (1993) Annu. Rev. Biochem. , vol.62 , pp. 893
    • Das, A.1
  • 9
    • 0021745344 scopus 로고
    • Transcription antitermination in vitro by lambda N gene product: Requirement for a phage nut site and the product of host nusA, nusB and nusE genes
    • Das A. and Wolska K. 1984. Transcription antitermination in vitro by lambda N gene product: Requirement for a phage nut site and the product of host nusA, nusB and nusE genes. Cell 38: 165.
    • (1984) Cell , vol.38 , pp. 165
    • Das, A.1    Wolska, K.2
  • 10
    • 0028064962 scopus 로고
    • Control of transcription processivity in phage λ: Nus factors strengthen the termination-resistant state of RNA polymerase induced by N antitermination
    • DeVito J. and Das A. 1994. Control of transcription processivity in phage λ: Nus factors strengthen the termination-resistant state of RNA polymerase induced by N antitermination. Proc. Natl. Acad. Sci. 91: 8660.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 8660
    • Devito, J.1    Das, A.2
  • 11
    • 0024394611 scopus 로고
    • Effects of all single base substitutions in the loop of boxB on antitermination by bacteriophage λ's N protein
    • Doelling J.H. and Franklin N.C. 1989. Effects of all single base substitutions in the loop of boxB on antitermination by bacteriophage λ's N protein. Nucleic Acids Res. 17: 5565.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 5565
    • Doelling, J.H.1    Franklin, N.C.2
  • 12
    • 0027132539 scopus 로고
    • Amino-terminal amino acids modulate sigma-factor DNA-binding activity
    • Dombroski A.J., Walter W.A., and Gross C.A. 1993. Amino-terminal amino acids modulate sigma-factor DNA-binding activity. Genes Dev. 7: 2446.
    • (1993) Genes Dev. , vol.7 , pp. 2446
    • Dombroski, A.J.1    Walter, W.A.2    Gross, C.A.3
  • 13
    • 0026755533 scopus 로고
    • Polypeptides containing highly conserved regions of transcription initiation factor σ70 exhibit specificity of binding to promoter DNA
    • Dombroski A.J., Walter W.A., Record M.T., Jr., Siegele D.A., and Gross C.A. 1992. Polypeptides containing highly conserved regions of transcription initiation factor σ70 exhibit specificity of binding to promoter DNA. Cell 70: 501.
    • (1992) Cell , vol.70 , pp. 501
    • Dombroski, A.J.1    Walter, W.A.2    Record Jr., M.T.3    Siegele, D.A.4    Gross, C.A.5
  • 14
    • 0026346182 scopus 로고
    • Using protein affinity chromatography to probe the structure of protein machines
    • Formosa T., Barry J., Alberts B.M., and Greenblatt J. 1992. Using protein affinity chromatography to probe the structure of protein machines. Methods Enzymol. 208: 24.
    • (1992) Methods Enzymol. , vol.208 , pp. 24
    • Formosa, T.1    Barry, J.2    Alberts, B.M.3    Greenblatt, J.4
  • 15
    • 0022368688 scopus 로고
    • Conservation of genome form but not sequence in the transcription antitermination determinants of bacteriophage λ, φ21 and P22
    • Franklin N.C. 1985. Conservation of genome form but not sequence in the transcription antitermination determinants of bacteriophage λ, φ21 and P22. J. Mol. Biol. 181: 75.
    • (1985) J. Mol. Biol. , vol.181 , pp. 75
    • Franklin, N.C.1
  • 16
    • 0027288664 scopus 로고
    • Clustered arginine residues of bacteriophage λ N protein are essential to antitermination of transcription, but their locale cannot compensate for boxB loop defects
    • -. 1993. Clustered arginine residues of bacteriophage λ N protein are essential to antitermination of transcription, but their locale cannot compensate for boxB loop defects. J. Mol. Biol. 231: 343.
    • (1993) J. Mol. Biol. , vol.231 , pp. 343
  • 17
    • 0024671716 scopus 로고
    • Over-expression of "N" antitermination proteins of bacteriophage λ, φ21, and P22 causes loss of N specificity
    • Franklin N.C. and Duelling J.H. 1989. Over-expression of "N" antitermination proteins of bacteriophage λ, φ21, and P22 causes loss of N specificity. J. Bacterial. 171: 2513.
    • (1989) J. Bacterial. , vol.171 , pp. 2513
    • Franklin, N.C.1    Duelling, J.H.2
  • 18
    • 0015985734 scopus 로고
    • Genetic characterization of a bacterial locus involved in the activity of the N function of phage lambda
    • Friedman D.I. and Baron L.S. 1974. Genetic characterization of a bacterial locus involved in the activity of the N function of phage lambda. Virology 58: 141.
    • (1974) Virology , vol.58 , pp. 141
    • Friedman, D.I.1    Baron, L.S.2
  • 19
    • 0028842495 scopus 로고
    • Transcription antitermination: The lambda paradigm updated
    • Friedman D.I. and Court D.L. 1995. Transcription antitermination: The lambda paradigm updated. Mol. Microbiol. 18: 191.
    • (1995) Mol. Microbiol. , vol.18 , pp. 191
    • Friedman, D.I.1    Court, D.L.2
  • 20
    • 0020806302 scopus 로고
    • Evidence that a nucleotide sequence, "boxA", is involved in the action of the NusA protein
    • Friedman D.I. and Olson E.R. 1983. Evidence that a nucleotide sequence, "boxA", is involved in the action of the NusA protein. Cell 34: 143.
    • (1983) Cell , vol.34 , pp. 143
    • Friedman, D.I.1    Olson, E.R.2
  • 21
    • 0017137372 scopus 로고
    • Cooperative effects of bacterial mutations affecting lambda N gene expression. I. Isolation and characterization of a nusB mutant
    • Friedman D.I., Baumann M., and Baron L.S. 1976. Cooperative effects of bacterial mutations affecting lambda N gene expression. I. Isolation and characterization of a nusB mutant. Virology 73: 119.
    • (1976) Virology , vol.73 , pp. 119
    • Friedman, D.I.1    Baumann, M.2    Baron, L.S.3
  • 22
    • 0015733820 scopus 로고
    • Gene N regulator function of phage lambda imm21: Evidence that a site of N action differs from a site of N recognition
    • Friedman D.I., Wilgus G.S., and Mural R.J. 1973. Gene N regulator function of phage lambda imm21: Evidence that a site of N action differs from a site of N recognition. J. Mol. Biol. 81: 505.
    • (1973) J. Mol. Biol. , vol.81 , pp. 505
    • Friedman, D.I.1    Wilgus, G.S.2    Mural, R.J.3
  • 23
    • 0025666852 scopus 로고
    • Transcription-dependent competition for a host factor: The function and optimal sequence of the phage λ boxA transcription antitermination signal
    • Friedman D.I., Olson E.R., Johnson L.L., Alessi D., and Craven M.G. 1990. Transcription-dependent competition for a host factor: The function and optimal sequence of the phage λ boxA transcription antitermination signal. Genes Dev. 4: 2210.
    • (1990) Genes Dev. , vol.4 , pp. 2210
    • Friedman, D.I.1    Olson, E.R.2    Johnson, L.L.3    Alessi, D.4    Craven, M.G.5
  • 24
    • 0342329562 scopus 로고
    • Evidence that ribosomal protein S10 participates in the control of transcription termination
    • Friedman D.I., Sauer A.T., Baumann M.R., Baron L.S., and Adhya S.L. 1981. Evidence that ribosomal protein S10 participates in the control of transcription termination. Proc. Natl. Acad. Sci. 78: 1115.
    • (1981) Proc. Natl. Acad. Sci. , vol.78 , pp. 1115
    • Friedman, D.I.1    Sauer, A.T.2    Baumann, M.R.3    Baron, L.S.4    Adhya, S.L.5
  • 26
    • 0022423255 scopus 로고
    • Efficient modification of E. coli RNA polymerase in vitro by the N gene transcription antitermination protein of bacteriophage lambda
    • Goda Y. and Greenblatt J. 1985. Efficient modification of E. coli RNA polymerase in vitro by the N gene transcription antitermination protein of bacteriophage lambda. Nucleic Acids Res. 13: 2569.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 2569
    • Goda, Y.1    Greenblatt, J.2
  • 27
    • 0020181692 scopus 로고
    • The phage λ gene Q product: Activity of a transcription antiterminator in vitro
    • Grayhack E.J. and Roberts J.W. 1982. The phage λ gene Q product: Activity of a transcription antiterminator in vitro. Cell 30: 637.
    • (1982) Cell , vol.30 , pp. 637
    • Grayhack, E.J.1    Roberts, J.W.2
  • 28
    • 0015576057 scopus 로고
    • Regulation of the expression of the N gene of bacteriophage lambda
    • Greenblatt J. 1973. Regulation of the expression of the N gene of bacteriophage lambda. Proc. Natl. Acad. Sci. 70: 421.
    • (1973) Proc. Natl. Acad. Sci. , vol.70 , pp. 421
    • Greenblatt, J.1
  • 29
    • 0021359978 scopus 로고
    • Regulation of transcription termination in E. coli
    • _. 1984. Regulation of transcription termination in E. coli. Can. J. Biochem. Cell. Biol. 62: 79.
    • (1984) Can. J. Biochem. Cell. Biol. , vol.62 , pp. 79
  • 30
    • 0019887796 scopus 로고
    • The nusA gene product of Escherichia coli: Its identification and a demonstration that it interacts with the gene N transcription antitermination protein of bacteriophage lambda
    • Greenblatt J. and Li J. 1981a. The nusA gene product of Escherichia coli: Its identification and a demonstration that it interacts with the gene N transcription antitermination protein of bacteriophage lambda. J. Mol. Biol. 147: 11.
    • (1981) J. Mol. Biol. , vol.147 , pp. 11
    • Greenblatt, J.1    Li, J.2
  • 31
    • 0019480456 scopus 로고
    • Interaction of the sigma factor and the nusA gene protein of E. coli with RNA polymerase in the initiation-termination cycle of transcription
    • _. 1981b. Interaction of the sigma factor and the nusA gene protein of E. coli with RNA polymerase in the initiation-termination cycle of transcription. Cell 24: 421.
    • (1981) Cell , vol.24 , pp. 421
  • 32
    • 0019223117 scopus 로고
    • Purification of the gene N transcription antitermination protein of bacteriophage lambda
    • Greenblatt J., Malnoe P., and Li J. 1980. Purification of the gene N transcription antitermination protein of bacteriophage lambda. J. Biol. Chem. 255: 1465.
    • (1980) J. Biol. Chem. , vol.255 , pp. 1465
    • Greenblatt, J.1    Malnoe, P.2    Li, J.3
  • 33
    • 0019729701 scopus 로고
    • Termination of transcription by the nusA gene protein of Escherichia coli
    • Greenblatt J., McLimont M., and Hanly S. 1981. Termination of transcription by the nusA gene protein of Escherichia coli. Nature 292: 215.
    • (1981) Nature , vol.292 , pp. 215
    • Greenblatt, J.1    McLimont, M.2    Hanly, S.3
  • 34
  • 35
    • 0026423027 scopus 로고
    • Structural features that give rise to the unusual stability of RNA hairpins containing GNRA loops
    • Heus H.A. and Pardi A. 1991. Structural features that give rise to the unusual stability of RNA hairpins containing GNRA loops. Science 253: 191.
    • (1991) Science , vol.253 , pp. 191
    • Heus, H.A.1    Pardi, A.2
  • 36
    • 0017192297 scopus 로고
    • Specificity of genetic elements controlling regulation of early functions in temperate bacteriophages
    • Hilliker S. and Botstein D. 1976. Specificity of genetic elements controlling regulation of early functions in temperate bacteriophages. J. Mol. Biol. 106: 537.
    • (1976) J. Mol. Biol. , vol.106 , pp. 537
    • Hilliker, S.1    Botstein, D.2
  • 37
    • 0023661178 scopus 로고
    • An elongation control particle containing the N gene transcription antitermination protein of bacteriophage lambda
    • Horwitz R.W., Li J., and Greenblatt J. 1987. An elongation control particle containing the N gene transcription antitermination protein of bacteriophage lambda. Cell 51: 631.
    • (1987) Cell , vol.51 , pp. 631
    • Horwitz, R.W.1    Li, J.2    Greenblatt, J.3
  • 38
    • 0025975458 scopus 로고
    • Genetic interaction between the β' subunit of RNA polymerase and the arginine-rich domain of Escherichia coli NusA protein
    • Ito K., Egawa K., and Nakamura Y. 1991. Genetic interaction between the β' subunit of RNA polymerase and the arginine-rich domain of Escherichia coli NusA protein. J. Bacterial. 173: 1492.
    • (1991) J. Bacterial. , vol.173 , pp. 1492
    • Ito, K.1    Egawa, K.2    Nakamura, Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.