Contribution to phenotypic and genotypic characterization of Bacillus licheniformis and description of new genomovars

Systematic and Applied Microbiology

Volumn 21, Issue 4, 1998, Pages 520-529

  Manachini, P L ^a   Fortina, M G ^a   Levati, L ^a   Parini, C ^a  

^a Dipto Sci Tecnologie Alimentari M   (Italy)

Author keywords

ARDRA; Bacillus licheniformis; DNA relatedness; Genomovar; Phenotypic characteristics; Wild isolates

Indexed keywords

ARTICLE; BACILLUS LICHENIFORMIS; BACTERIUM ISOLATION; BIODIVERSITY; DNA BASE COMPOSITION; DNA DETERMINATION; GENOTYPE; GEOGRAPHIC DISTRIBUTION; PHENOTYPE; PRIORITY JOURNAL; SOIL;

ACTINOBACTERIA (CLASS); BACILLUS CEREUS; BACILLUS COAGULANS; BACILLUS LICHENIFORMIS; BACILLUS PUMILUS; BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS); BACTERIUM SUBTILIS; PUMILUS; UNCULTURED ACTINOMYCETE;

EID: 0032436627     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0723-2020(98)80064-7     Document Type: Article

References (36)

1. nd Netherlands Biotechnology Congress 1988 Netherlands Biotechnological Society Zeist, The Netherlands 151 155
2. C. Ash J.A.E. Farrow S. Wallbanks M.D. Collins Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small-subunit-ribosomal RNA sequences Lett. Appl. Microbiol. 13 1991 202 206
3. A.S. De Boer F. Priest B. Diderichsen On the industrial use of Bacillus licheniformis a review Appl. Microbiol. Bitechnol. 40 1994 595 598
4. T.A. Bull M. Goodfellow J.H. Slater Biodiversity as a source of innovation in biotechnology Annu. Rev. Microbiol. 46 1992 219 252
5. D. Claus R.C.W. Berkeley The genus Bacillus P.H.A. Sneath N.S. Mair M.E. Sharpe J.G. Holt Bergey's Manual of Systematic Bacteriology vol. 2 1986 The Williams & Wilkins Co. Baltimore 1105 1129
6. B. Diderichsen G.B. Poulsen P.L. Jørgensen Cloning and expression of a chromosomal alpha-amylase gene from Bacillus stearothermophilus Res. Microbiol. 142 1991 793 796
7. K.E. Duncan N. Ferguson K. Kimura X. Zhou C.A. Istock Fine-scale genetic and phenotypic structure in natural population of Bacillus subtilis and Bacillus licheniformis ximplications for bacterial evolution and speciation Evolution 48 1994 2002 2025
8. A. Fiechter Biosurfactants: moving towards industrial application Trends Biotechnol. 10 1992 208 217
9. R.E. Gordon W.C. Haynes C. Hor-Nay Pang The genus Bacillus 1973 U.S. Department of Agriculture Washington D.C.
10. H.I. Haavik S. Thomassen A bacitracin-negative mutant of Bacillus licheniformis which is able to sporulate J. Gen. Microbiol. 76 1973 451 454
11. M. Heyndrickx L. Vauterin P. Vandamme K. Kersters P. De Vos Applicability of combined amplified ribosomal DNA restriction analysis (ARDRA) patterns in bacterial phylogeny and taxonomy J. Microbiological Methods 26 1996 247 259
12. G. Hintermann H.M. Fischer R. Crameri R. Hutter Simple procedure for distinguishing CCC, OC and L forms of plasmid DNA by agarose gel electrophoresis Plasmid 5 1981 371 373
13. C.P. Kurtzman C.J. Johnson m.J. Smiley Determination of conspecificity of Candida utilis and Hansenula jadinii through DNA reassociation Mycologia 71 1979 8744 8747
14. R.W. Leen J.G. van Bakhuis R.F.W.C. Beckhoven M. von, Bürge L.C.J. Dorssers R.W.J. Hommes P.J. Lemson B. Noordam N.L.M. Persoon G. Wagemaker Production of human-interleukin-3 using industrial microorganisms Biotechnology 9 1991 47 52
15. N.A. Logan R.C.W. Berkeley Identification of Bacillus strains using API System J. Gen. Microbiol. 130 1984 1871 1882
16. P.L. Manachini M.G. Fotina C. Parini R. Craveri Bacillus thermoruber sp nov., nom. rev., a red-pigmented thermophilic bacterium Int. J. Syst. Bacteriol. 35 1985 493 496
17. P.L. Manachini m.G. Fortina C. Parini Characterization of a crude proteolytic preparation of potential application Ann. Microbiol. 37 1987 145 150
18. P.L. Manachini C. Parini M.G. Fortina L. Benazzi Bli I, a restriction endonuclease from Bacillus licheniformis FEBS Lett. 214 1987 305 307
19. P.L. Manachini M.G. Fortina C. Parini Enzymic modification of vegetable protein by a crude preparation from a strain of Bacillus licheniformis J. Sci. Food Agric. 45 1988 263 266
20. P.L. Manachini M.G. Fortina Proteinase production by halophilic isolates from marine sediments Folia Microbiol. 39 1994 378 380
21. M. Mandel J. Marmur Use of ultraviolet absorbance-temperature profile for determining the guanine plus cytosine content of DNA Methods Enzymol. 12B 1968 195 206
22. J. Marmur A procedure for the isolation of deoxyribonucleic acid from microorganisms J. Mol. Biol. 3 1961 208 218
23. J. Marmur P. Doty Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature J. Mol. Biol. 5 1962 109 118
24. nd edition 1979 Academic Press London 277 296
25. C. Parini M.G. Fortina M. Roggiani P.L. Manachini Isolation and preliminary characterization of plasmid in Bacillus licheniformis strain MP3 Lett. Appl. Microbiol. 9 1989 169 171
26. C. Parini M.G. Fortina P.L. Manachini E. De Rossi G. Riccardi Detection and characterization of naturally occurring plasmids in Bacillus licheniformis FEMS Microbiol. Lett. 81 1991 329 334
27. C. Parini M.G. Fortina Site-specific restriction endonucleases in Bacillus licheniformis FEMS Microbiol. Lett. 132 1995 285 289
28. W.J. Quax A.J. Bonekamp M.W.E.M. Van Tilborg Correct secretion of heterologous proteins from Bacillus licheniformis R.H. Baltz G.D. Hegeman P.L. Skatrud Industrial microorganisms: basic and applied molecular genetics 1993 American Society for Microbiology Washington D.C. 143 147
29. J. Sambrook E.F. Fritsch T. Maniatis Molecular cloning: a laboratory manual 1989 Cold Spring Harbor Laboratory New York
30. R.J. Scidler M. Mandel Quantitative aspects of deoxyribonucleic acid renaturation: base composition, state of chromosome replication and polynuleotide homologies J. Bacteriol. 106 1971 608 614
31. E. Stackebrandt B.M. Goebel Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology Int. J. Syst. Bacteriol. 44 1994 846 849
32. J.B. Ursing R.A. Rosselló-Mora E. García-Valdés J. Lalucat Taxonomic note: a pragmatic approach to the nomenclature of phenotypically similar genomic groups Int. J. Syst. Bacteriol. 45 1995 604
33. L.G. Wayne D.J. Brenner R.R. Colwell P.A.D. Grimont O. Kandler M.I. Krichevsky L.H. Moore W.E.C. Moore R.G.E. Murray E. Stackebrandt M.P. Starr H.G. Trüper Report of the Ad hoc Committee on Reconciliation of Approaches to Bacterial Systematics Int. J. Syst. Bacteriol. 37 1987 463 464
34. K. Yoshimu O. Yamamoto T Seki Y. Oshima Distribution of heterogeneous homologous plasmids in Bacillus spp Appl. Environm. Microbiol. 45 1983 1733 1740
35. P. Zawadzki M.A. Riley F.M. Cohan Homology among nearly all plasmids infecting three Bacillus species J. Bacteriol. 178 1996 191 198
36. M.M. Zukowski Production of commercially valuable products R.H. Doi M. McGloughlin Biology of bacilli, applications to industry 1992 Butterworth-Heinemann Boston 311 337