An evaluation of a hierarchical branching process as a model for species diversification

Paleobiology

Volumn 24, Issue 4, 1998, Pages 498-511

  Przeworski, Molly ^a   Wall, Jeffrey D ^a  

^a UNIVERSITY OF CHICAGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0032434606     PISSN: 00948373     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0094837300020121     Document Type: Review

References (44)

1. Anderson, S., and C. Anderson. 1975. Three Monte Carlo models of faunal evolution. American Museum Novitates 2563:1-6.
2. Bulmer, M. G. 1979. Principles of statistics. Dover, New York.
3. Corbet, G. B., and J. E. Hill. 1991. A world list of mammalian species. Oxford University Press, Oxford.
4. Dial, K., and J. Marzluff. 1989. Nonrandom diversification within taxonomic assemblages. Systematic Zoology 38:26-37.
5. Eble, G. J. 1998. Testing the role of development in evolutionary radiations. In M. McKinney, ed. Biodiversity dynamics: turnover of populations, taxa, and communities. Columbia University Press, New York. (In press.)
6. Erwin, D. H. 1992. A preliminary classification of evolutionary radiations. Historical Biology 6:133-147.
7. _. 1993. Early introduction of major morphological innovations. Acta Palaeontologica Polonica 38:281-94.
8. Flessa, K. W., and J. S. Levinton. 1974. Phanerozoic diversity patterns: tests for randomness. Journal of Geology 83:239-248.
9. Foote, M. 1994. Temporal variation in extinction risk and temporal scaling of extinction metrics. Paleobiology 20:424-444.
10. Foote, M., and D. M. Raup. 1996. Fossil preservation and stratigraphic ranges of taxa. Paleobiology 22:121-140.
11. Gould, S. J., D. M. Raup, J. J. Sepkoski Jr. T. J. M. Schopf, and D. S. Simberloff. 1977. The shape of evolution: a comparison of real and random clades. Paleobiology 3:23-40.
12. Guyer, C., and J. B. Slowinski. 1991. Comparisons of observed phylogenetic topologies with null expectations among three monophyletic lineages. Evolution 45:340-350.
13. _. 1993. Adaptive radiation and the topology of large phylogenies. Evolution 47:253-263.
14. Heard, S. B. 1992. Patterns in tree balance among cladisiic, phenetic, and randomly generated phylogenetic trees. Evolution 46:1818-1826.
15. Hudson, R. R. 1990. Gene genealogies and the coalescent process. In D. Futuyma and J. Antonovics, eds. Oxford Surveys in Evolutionary Biology 7:1-44. Oxford University Press, Oxford.
16. Kendall, D. G. 1948. On the generalized "birth-and-death" process. Annals of Mathematical Statistics 19:1-15.
17. Kirkpatrick, M., and M. Slatkin. 1993. Searching for evolutionary patterns in the shape of a phylogenetic tree. Evolution 47: 1171-1181.
18. Lernen, C. A., and P. W. Freeman. 1984. The genus: a macroevolutionary problem. Evolution 38:1219-1237.
19. Levinton, J. S., and J. Farris. 1987. On the estimation of taxonomic longevity from Lyellian Curves. Paleobiology 13:479-483.
20. Mooers, A. O. 1995. Tree balance and tree completeness. Evolution 49:379-384.
21. Mooers, A. O., R. D. M. Page, A. Purvis, and P. H. Harvey. 1995. Phylogenetic noise leads to unbalanced cladistic tree reconstructions. Systematic Biology 44:332-342.
22. Patzkowsky, M. F. 1995. A hierarchical branching model of evolutionary radiations. Paleobiology 21:440-460.
23. Pease, C. M. 1985. Biases in the durations and diversities of fossil taxa. Paleobiology 11:272-292.
24. _. 1987. Lyellian curves and mean taxonomic durations. Paleobiology 13:484-487.
25. _. 1988 Biases in the survivorship curves of fossil taxa. Journal of Theoretical Biology 130:31-48.
26. Purvis A., S. Nee, and P. H. Harvey. 1995. Macroevolutionary inferences from primate phytogeny. Proceedings of the Royal Society of London B 260:329-333.
27. Raup, D. M. 1985. Mathematical models of cladogenesis. Paleobiology 11:42-52.
28. _. 1991 A kill curve for Phanerozoic marine species. Paleobiology 17:37-48.
29. Raup, D. M., S. J. Gould, T. J. M. Schopf, and D. Simberloff. 1973. Stochastic models of phylogeny and the evolution of diversity. Journal of Geology 81:525-542.
30. Reyes, A., G. Pesole, and C. Saccone. 1998. Complete mitochondrial DNA sequence of the fat dormouse, Glis glis: further evidence of rodent paraphyly. Molecular Biology and Evolution 15:499-505.
31. Savage, H. 1983. The shape of evolution: systematic tree topology. Biological Journal of the Linnean Society 20:225-244.
32. Sepkoski, J. J., Jr. 1978. A kinetic model of Phanerozoic taxonomic diversity I. Anaysis of marine orders. Paleobiology 19:168-184.
33. _. 1992. A compendium of fossil marine animal families, 2d ed. Milwaukee Public Museum Contributions in Biology and Geology, Milwaukee.
34. Sepkoski, J. J., Jr., and D. Kendrick. 1993. Numerical experiments with model monophyletic and paraphyletic taxa. Paleobiology 19:168-184.
35. Sibley, C. G., and B. L. Monroe Jr. 1990. Distribution and taxonomy of birds of the world. Yale University Press, New Haven, Conn.
36. Smith, A., and C. Patterson. 1988. The influence of taxonomic method on the perception of patterns of evolution. Evolutionary Biology 23:127-216.
37. Smuts, B. B., D. L. Cheney, R. M. Seyfarth, R. W. Wrangham, and T. T. Struhsaker. 1987. Primate societies. University of Chicago Press, Chicago.
38. Stanley, S. 1990. Adaptive radiation and macroevolution. In P. Taylor and G. Larwood, eds. Major evolutionary radiations. Clarendon Press, Oxford.
39. Stanley, S., P. Signor, S. Lidgard, and A. Karr. 1981. Natural clades differ from "random" clades: simulations and analyses. Paleobiology 7:115-127.
40. Valentine, J. W. 1980. Determinants of diversity in higher taxonomic categories. Paleobiology 6:444-450.
41. _. 1995. Why no new phyla after the Cambrian? Genome and ecospace hypothesis revisited. Palaois 10:190-194.
42. Van Valen, L. 1973. A new evolutionary law. Evolutionary Theory 1:1-30.
43. Wilson, D. E., and D. M. Reeder, eds. 1993. Mammal species of the world. Smithsonian Institution Press, Washington, D.C.
44. Wollenberg, K., J. Arnold, and J. C. Avise. 1996. Recognizing the forest for the trees: testing temporal patterns of cladogenesis using a null model of stochastic diversification. Molecular Biology and Evolution 13:833-849.