In situ hybridization identifies the diploid progenitor species of Coffea arabica (Rubiaceae)

Theoretical and Applied Genetics

Volumn 97, Issue 8, 1998, Pages 1204-1209

  Raina, S N ^a,c   Mukai, Y ^a   Yamamoto, M ^b  

^a OSAKA KYOIKU UNIVERSITY   (Japan)

^b Kansai Women's College   (Japan)

^c UNIVERSITY OF DELHI   (India)

Author keywords

Allopolyploidy; Coffea arabica; Genomic probe; In situ hybridization; Ribosomal DNA probes; Wild progenitors

Indexed keywords

CHROMOSOME ANALYSIS; COFFEA CANEPHORA; COFFEA CONGENSIS; COFFEA EUGENIOIDES; COFFEA LIBERICA; CULTIVAR; DIPLOIDY; DNA PROBE; FLUORESCENCE IN SITU HYBRIDIZATION; GENOMIC DNA; PLANT GENETICS; PLANT GENOME;

EID: 0032431121     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220051011     Document Type: Article

References (33)

1. Anamthawat-Jonsson K, Schwarzacher T, Leitch AR, Bennett MD, Heslop-Harrison JS (1990) Discrimination between closely related Triticeae species using genomic DNA as a probe. Theor Appl Genet 79 : 721-728
2. Bailey JP, Bennett ST, Bennett MD, Stace CA (1993) Genomic in situ hybridization identifies parental chromosomes in the wild grass hybrid x Festulpia hubbardii. Heredity 71 : 413-420
3. Bennett MD (1995) The development and use of genomic in situ hybridization (GISH) as a new tool in plant biosystematics. In: Brandham PE, Bennett MD (eds) Kew Chromosome Conf IV. Royal Botanic Gardens, Richmond, Surrey, pp 167-183
4. Bennett MD, Leitch IJ (1995) Nuclear DNA amounts in angiosperms. Ann Bot 76 : 113-176
5. Bennett ST, Kenton AY, Bennett MD (1992) Genomic in situ hybridization reveals the allopolyploid nature of Milium montianum (Gramineae). Chromosoma 101 : 420-424
6. Berthou F, Trouslot P (1977) L'analyse du polymorphisme enzymatique dans le genre Coffea: adaptation d'une méthode d'electrophorése en série; premiers résultats. In: Assoc Scient Intl Coffee (ASIC) (Eds) 8éme Colloque Sci Int Café. ASIC, Paris, pp 373-384
7. Berthou F, Trouslot P, Hamon S, Vedel F, Quetier F (1980) Analyse en électrophorése du polymorphisme biochimique des caféiers: variation enzymatique dans dix-huit populations sauvages; variation de I'ADN mitochondrial dans les espéces C. canephora, C. eugenioides et C. arabica. Cafe Cacao The 24: 313-326
8. Berthou F, Mathieu C, Vedel F (1983) Chloroplast and mitochondrial DNA variation as indicator of phylogenetic relationships in the genus Coffea L. Theor Appl Genet 65 : 77-84
9. Bouharmont J (1959) Recherches sur les affinités chromosomiques dans le genre Coffea. Publ INEAC Ser Sci 77 : 1-94
10. Carvalho A (1952) Taxonomia de Coffea arabica L. 6. Caracteres morfologicos dos haploides. Bragantia 12 : 201-212
11. Charrier A, Berthaud J (1985) Botanical classification of coffee. In: Clifford MN, Wilson KC (eds) Coffee: botany, biochemistry and production of beans and beverage. Croom Held Publ, Beckenham, UK, pp 13-47
12. Chen Q, Armstrong K (1994) Genomic in situ hybridization in Avena sativa. Genome 37 : 607-612
13. Dublin P, Enjalric F, Lardet L, Carron MP, Trolinder N, Pannetier C (1991) Estate crops. In: Debergh PC, Zimmerman RH (eds) Micropropagation: technology and practice. Kluwer Academic Publ, Dordrecht, The Netherlands, pp 337-361
14. Fukui K, Ohmido N, Khush GS (1994) Variability in rDNA loci in the genus Oryza detected through fluorescence in situ hybridization. Theor Appl Genet 87 : 893-899
15. Gerlach WL, Bedbrook JR (1979) Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Res 7 : 1869-1885
16. Gerlach WL, Dyer TA (1980) Sequence organization of the repeating units in the nucleus of wheat which contain 5S rRNA genes. Nucleic Acids Res 8 : 4851-4865
17. Heslop- Harrison JS, Schwarzacher T (1996) Genomic southern and in situ hybridization for plant genome analysis. In: Jauhar PP (ed) Methods of genome analysis in plants, CRC Press, New York, pp 163-179
18. Heslop-Harrison JS, Leitch AR, Schwarzacher T, Anamthawat-Jonsson K (1990) Detection and characterization of 1B/1R translocations in hexaploid wheat. Heredity 65 : 385-392
19. Jiang J, Morris KLD, Gill BS (1994) Introgression of Elymus trachycaulus chromatin into common wheat. Chromosome Res 2 : 3-13
20. Kamm A, Galasso I, Schmidt T, Heslop-Harrison JS (1995) Analysis of a repetitive DNA family from Arabidopsis arenosa and relationships between Arabidopsis species. Plant Mol Biol 27 : 853-862
21. Kenton A, Parokonny AS, Gleba YY, Bennett MD (1993) Characterization of the Nicotiana tabacum L. genomes by molecular cytogenetics. Mol Gen Genet 240 : 159-169
22. Linde-Laursen IB, Ibsen E, Bothmer RV, Giese H (1992) Physical localization of active and inactive rRNA gene loci in Hordeum marinum ssp. gussoneanum (4 x) by in situ hybridization. Genome 35 : 1032-1036
23. Mukai Y, Gill BS (1991) Detection of barley chromatin added to wheat by genomic in situ hybridization. Genome 34 : 448-452
24. Orozco-Castilho C, Chalmers KJ, Waugh R, Powell W (1994) Detection of genetic diversity and selective gene introgression in coffee using RAPD markers. Theor Appl Genet 87 : 934-940
25. Paillard M, Lashermes P, Petiard V (1996) Construction of a molecular linkage map in coffee. Theor Appl Genet 93 : 41-47
26. Parokonny AS, Kenton AY (1995) Comparative physical mapping and evolution of the Nicotiana tabacum L. karyotype. In: Brandham PE, Bennett MD (eds) Kew Chromosome Conf IV. Royal Botanic Gardens, Richmond, Surrey, pp 301-320
27. Parokonny AS, Kenton AY, Gleba YY, Bennett MD (1994) The fate of recombinant chromosomes and genome interaction in Nicotiana asymmetric somatic hybrids and their sexual progeny. Theor Appl Genet 89 : 488-497
28. Raina SN, Narayan RKJ (1984) Changes in DNA composition in the evolution of Vicia species. Theor Appl Genet 68 : 187-192
29. Saghai Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc Natl Acad Sci USA 81 : 8014-8018
30. Schwarzacher T, Leitch AR, Bennett MD, Heslop-Harrison JS (1989) In situ localization of parental genomes in a wide hybrid. Ann Bot 64 : 315-324
31. Schwarzacher T, Anamthawat-Jonsson K, Harrison GE, Islam AKMR, Jia JZ, King IP, Leitch AR, Miller TE, Reader SM, Rogers WJ, Shi M, Heslop-Harrison JS (1992) Genomic in situ hybridization to identify alien chromosomes and chromosome segments in wheat. Theor Appl Genet 84 : 778-786
32. Thomas HM, Morgan WG, Meredith MR, Humphries MW, Thomas H, Leggett JM (1994) Identification of parental and recombined chromosomes in hybrid derivatives of Lolium multiflorum x Festuca pratensis by genome in situ hybridization. Theor Appl Genet 88 : 909-913
33. Wrigley G (1995) Coffee. In: Smartt J, Simmonds NW (eds) Evolution of crop plants. Longman Scientific and Technical, UK, pp 438-443