메뉴 건너뛰기




Volumn 38, Issue 5, 1998, Pages 699-712

Prediction of functional regions of the maize streak virus replication-associated proteins by protein-protein interaction analysis

Author keywords

Maize retinoblastoma protein; Maize streak virus; Rep proteins; Transactivation; Yeast two hybrid system

Indexed keywords

COMPLEMENTARITY DETERMINING REGION; DNA REPLICATION; GEMINIVIRUS; GENETIC TRANSCRIPTION; MAIZE STREAK VIRUS; OLIGOMERIZATION; PROTEIN PROTEIN INTERACTION; TRANSACTIVATION; VIRUS REPLICATION;

EID: 0032215491     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006076316887     Document Type: Article
Times cited : (65)

References (57)
  • 1
    • 0024654197 scopus 로고
    • Mapping of Digitaria streak virus transcripts reveals different RNA species from the same transcription unit
    • Accotto G-P, Donson J, Mullineaux PM: Mapping of Digitaria streak virus transcripts reveals different RNA species from the same transcription unit. EMBO J 8: 1033-1039 (1989).
    • (1989) EMBO J , vol.8 , pp. 1033-1039
    • Accotto, G.-P.1    Donson, J.2    Mullineaux, P.M.3
  • 3
    • 0025923283 scopus 로고
    • Point substitutions in a promoter-like region and the V1 gene affect the host range and symptoms of maize streak virus
    • Boulton MI, King DI, Donson J, Davies JW: Point substitutions in a promoter-like region and the V1 gene affect the host range and symptoms of maize streak virus. Virology 183: 114-121 (1991).
    • (1991) Virology , vol.183 , pp. 114-121
    • Boulton, M.I.1    King, D.I.2    Donson, J.3    Davies, J.W.4
  • 4
    • 0017868338 scopus 로고
    • Empirical predictions of protein conformation
    • Chou PY, Fasman GD: Empirical predictions of protein conformation. Annu Rev Biochem 47: 251-276 (1978).
    • (1978) Annu Rev Biochem , vol.47 , pp. 251-276
    • Chou, P.Y.1    Fasman, G.D.2
  • 5
    • 0343844461 scopus 로고    scopus 로고
    • The two nonstructural proteins from wheat dwarf virus involved in viral gene expression and replication are retinoblastoma-binding proteins
    • Collin S, Fernández-Lobato M, Gooding PS, Mullineaux PM, Fenoll C: The two nonstructural proteins from wheat dwarf virus involved in viral gene expression and replication are retinoblastoma-binding proteins. Virology 219: 324-329 (1996).
    • (1996) Virology , vol.219 , pp. 324-329
    • Collin, S.1    Fernández-Lobato, M.2    Gooding, P.S.3    Mullineaux, P.M.4    Fenoll, C.5
  • 6
    • 0025835633 scopus 로고
    • Transcript mapping reveals different expression strategies for the bicistronic RNAs of the geminivirus wheat dwarf virus
    • Dekker EL, Woolston CJ, Xue Y, Cox B, Mullineaux PM: Transcript mapping reveals different expression strategies for the bicistronic RNAs of the geminivirus wheat dwarf virus. Nucl Acids Res 19: 4075-4081 (1991).
    • (1991) Nucl Acids Res , vol.19 , pp. 4075-4081
    • Dekker, E.L.1    Woolston, C.J.2    Xue, Y.3    Cox, B.4    Mullineaux, P.M.5
  • 7
    • 0029070826 scopus 로고
    • Rep protein of tomato yellow leaf curl geminivirus has an ATPase activity required for viral DNA replication
    • Desbiez C, David C, Mettouchi A, Laufs J, Gronenborn B: Rep protein of tomato yellow leaf curl geminivirus has an ATPase activity required for viral DNA replication. Proc Natl Acad Sci USA 92: 5640-5644 (1995).
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 5640-5644
    • Desbiez, C.1    David, C.2    Mettouchi, A.3    Laufs, J.4    Gronenborn, B.5
  • 9
    • 0024297042 scopus 로고
    • Genetic analysis of the tomato golden mosaic virus II. The product of the AL1 coding sequence is required for replication
    • Elmer JS, Brand L, Sunter G, Gardiner WE, Bisaro DM, Rogers SG: Genetic analysis of the tomato golden mosaic virus II. The product of the AL1 coding sequence is required for replication. Nucl Acids Res 16: 7043-7060 (1988).
    • (1988) Nucl Acids Res , vol.16 , pp. 7043-7060
    • Elmer, J.S.1    Brand, L.2    Sunter, G.3    Gardiner, W.E.4    Bisaro, D.M.5    Rogers, S.G.6
  • 10
    • 0028263738 scopus 로고
    • Construction of an improved host strain for two-hybrid screening
    • Feilotter HE, Hannon GJ, Ruddel CJ, Beach D: Construction of an improved host strain for two-hybrid screening. Nucl Acids Res 22: 1502-1503 (1994).
    • (1994) Nucl Acids Res , vol.22 , pp. 1502-1503
    • Feilotter, H.E.1    Hannon, G.J.2    Ruddel, C.J.3    Beach, D.4
  • 11
    • 0028237883 scopus 로고
    • Interaction between a geminivirus replication protein and origin DNA is essential for viral replication
    • Fontes EPB, Eagle PA, Sipe PS, Luckow VA, Hanley-Bowdoin L: Interaction between a geminivirus replication protein and origin DNA is essential for viral replication. J Biol Chem 11: 8459-8465 (1994).
    • (1994) J Biol Chem , vol.11 , pp. 8459-8465
    • Fontes, E.P.B.1    Eagle, P.A.2    Sipe, P.S.3    Luckow, V.A.4    Hanley-Bowdoin, L.5
  • 12
    • 0027979295 scopus 로고
    • Plant bZIP proteins gather at ACGT elements
    • Foster R, Izawa T, Chua N: Plant bZIP proteins gather at ACGT elements. FASEB J 8: 192-200 (1994).
    • (1994) FASEB J , vol.8 , pp. 192-200
    • Foster, R.1    Izawa, T.2    Chua, N.3
  • 13
    • 0017873321 scopus 로고
    • Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins
    • Garnier J, Osguthorpe DJ, Robson B: Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J Mol Biol 120: 97-120 (1978).
    • (1978) J Mol Biol , vol.120 , pp. 97-120
    • Garnier, J.1    Osguthorpe, D.J.2    Robson, B.3
  • 14
    • 0026638942 scopus 로고
    • Functional analysis of the transcriptional activator encoded by the maize B gene: Evidence for a direct functional interaction between two classes of regulatory proteins
    • Goff SA, Cone KC, Chandler VL: Functional analysis of the transcriptional activator encoded by the maize B gene: evidence for a direct functional interaction between two classes of regulatory proteins. Genes Devel 6: 864-875 (1992).
    • (1992) Genes Devel , vol.6 , pp. 864-875
    • Goff, S.A.1    Cone, K.C.2    Chandler, V.L.3
  • 15
    • 0026073575 scopus 로고
    • Identification of functional domains in the maize transcriptional activator C1: Comparison of wild type and dominant inhibitor proteins
    • Goff SA, Cone KC, Fromm ME: Identification of functional domains in the maize transcriptional activator C1: comparison of wild type and dominant inhibitor proteins. Genes Devel 5: 298-309 (1991).
    • (1991) Genes Devel , vol.5 , pp. 298-309
    • Goff, S.A.1    Cone, K.C.2    Fromm, M.E.3
  • 17
    • 0027468172 scopus 로고
    • Structure (?) and function of acidic transcription activators
    • Hahn S: Structure (?) and function of acidic transcription activators. Cell 72: 481-483 (1993).
    • (1993) Cell , vol.72 , pp. 481-483
    • Hahn, S.1
  • 18
    • 0026689428 scopus 로고
    • Regulation of the activities of African cassava mosaic virus promoters by the AC1, AC2 and AC3 gene products
    • Haley A, Zhan X, Richardson KA, Head K, Morris BAM: Regulation of the activities of African cassava mosaic virus promoters by the AC1, AC2 and AC3 gene products. Virology 188: 905-909 (1992).
    • (1992) Virology , vol.188 , pp. 905-909
    • Haley, A.1    Zhan, X.2    Richardson, K.A.3    Head, K.4    Morris, B.A.M.5
  • 21
    • 0028783977 scopus 로고
    • Regulation of African cassava mosaic virus complementary-sense gene expression by N-terminal sequences of the replication-associated protein AC1
    • Hong Y, Stanley J: Regulation of African cassava mosaic virus complementary-sense gene expression by N-terminal sequences of the replication-associated protein AC1. J Gen Virol 76: 2415-2422 (1995).
    • (1995) J Gen Virol , vol.76 , pp. 2415-2422
    • Hong, Y.1    Stanley, J.2
  • 22
    • 0028897532 scopus 로고
    • DNA replication specificity of TYLCV geminivirus is mediated by the aminoterminal 116 amino acids of the Rep protein
    • Jupin I, Hericourt F, Benz B, Gronenborn B: DNA replication specificity of TYLCV geminivirus is mediated by the aminoterminal 116 amino acids of the Rep protein. FEBS Lett 362: 116-120 (1995).
    • (1995) FEBS Lett , vol.362 , pp. 116-120
    • Jupin, I.1    Hericourt, F.2    Benz, B.3    Gronenborn, B.4
  • 23
    • 0031184266 scopus 로고    scopus 로고
    • A rapid method for the preparation of yeast lysates that facilitates the immunodetection of proteins generated by the yeast two-hybrid system
    • Laglands K, Prochownik EV: A rapid method for the preparation of yeast lysates that facilitates the immunodetection of proteins generated by the yeast two-hybrid system. Anal Biochem 249: 250-252 (1997).
    • (1997) Anal Biochem , vol.249 , pp. 250-252
    • Laglands, K.1    Prochownik, E.V.2
  • 24
    • 0023261635 scopus 로고
    • The retinoblastoma susceptibility gene encodes a nuclear phosphoprotein associated with DNA-binding activity
    • Lee W, Shew JY, Hong FD, Sery TW, Donoso LA, Young L, Bookstein R, Lee E: The retinoblastoma susceptibility gene encodes a nuclear phosphoprotein associated with DNA-binding activity. Nature 329: 642-645 (1987).
    • (1987) Nature , vol.329 , pp. 642-645
    • Lee, W.1    Shew, J.Y.2    Hong, F.D.3    Sery, T.W.4    Donoso, L.A.5    Young, L.6    Bookstein, R.7    Lee, E.8
  • 25
    • 0027394585 scopus 로고
    • Genetic evidence that an activation domain of GAL4 does not require acidity and may form a β sheet
    • Leuther KK, Salmeron JM, Johnston SA: Genetic evidence that an activation domain of GAL4 does not require acidity and may form a β sheet. Cell 72: 575-585 (1993).
    • (1993) Cell , vol.72 , pp. 575-585
    • Leuther, K.K.1    Salmeron, J.M.2    Johnston, S.A.3
  • 26
    • 0030007235 scopus 로고    scopus 로고
    • Intramolecular inhibition of activating transcription factor-2 function by its DNA-binding domain
    • Li X, Green MR: Intramolecular inhibition of activating transcription factor-2 function by its DNA-binding domain. Genes Devel 10: 517-527 (1996).
    • (1996) Genes Devel , vol.10 , pp. 517-527
    • Li, X.1    Green, M.R.2
  • 28
    • 0025674705 scopus 로고
    • Processing of complementary sense RNAs of Digitaria streak virus in its host and in transgenic tobacco
    • Mullineaux PM, Guerineau F, Accotto G-P: Processing of complementary sense RNAs of Digitaria streak virus in its host and in transgenic tobacco. Nucl Acids Res 18: 7259-7265 (1990).
    • (1990) Nucl Acids Res , vol.18 , pp. 7259-7265
    • Mullineaux, P.M.1    Guerineau, F.2    Accotto, G.-P.3
  • 29
    • 0029310496 scopus 로고
    • A geminivirus induces expression of a host DNA replication protein in terminally differentiated plant cells
    • Nagar S, Pedersen TJ, Carrick K, Hanley-Bowdoin L, Robertson D: A geminivirus induces expression of a host DNA replication protein in terminally differentiated plant cells. Plant Cell 7: 705-719 (1995).
    • (1995) Plant Cell , vol.7 , pp. 705-719
    • Nagar, S.1    Pedersen, T.J.2    Carrick, K.3    Hanley-Bowdoin, L.4    Robertson, D.5
  • 30
    • 0025080842 scopus 로고
    • Location of helical regions in tetrapyrrole-containing proteins by a helical hydrophobic moment analysis
    • Parker W, Song P: Location of helical regions in tetrapyrrole-containing proteins by a helical hydrophobic moment analysis. J Biol Chem 265: 17568-17575 (1990).
    • (1990) J Biol Chem , vol.265 , pp. 17568-17575
    • Parker, W.1    Song, P.2
  • 31
    • 0027452754 scopus 로고
    • Regulation of heat shock factor trimer formation: Role of a conserved leucine zipper
    • Rabindran SK, Haroun RI, Clos J, Wisniewski J, Wu C: Regulation of heat shock factor trimer formation: role of a conserved leucine zipper. Science 259: 230-234 (1993).
    • (1993) Science , vol.259 , pp. 230-234
    • Rabindran, S.K.1    Haroun, R.I.2    Clos, J.3    Wisniewski, J.4    Wu, C.5
  • 32
    • 0017798828 scopus 로고
    • Prediction of chain turns in globular proteins on a hydrophobic basis
    • Rose GD: Prediction of chain turns in globular proteins on a hydrophobic basis. Nature 272: 586-590 (1978).
    • (1978) Nature , vol.272 , pp. 586-590
    • Rose, G.D.1
  • 34
    • 0025847721 scopus 로고
    • DNA forms of the geminivirus African cassava mosaic virus consistent with a rolling circle mechanism of replication
    • Saunders K, Lucy A, Stanley J: DNA forms of the geminivirus African cassava mosaic virus consistent with a rolling circle mechanism of replication. Nucl Acids Res 19: 2325-2330 (1991).
    • (1991) Nucl Acids Res , vol.19 , pp. 2325-2330
    • Saunders, K.1    Lucy, A.2    Stanley, J.3
  • 35
    • 0024617448 scopus 로고
    • Wheat dwarf virus, a geminivirus of graminaceous plants needs splicing for replication
    • Schalk H-J, Matzeit V, Schiller B, Schell J, Gronenborn B: Wheat dwarf virus, a geminivirus of graminaceous plants needs splicing for replication. EMBO J 8: 359-364 (1989).
    • (1989) EMBO J , vol.8 , pp. 359-364
    • Schalk, H.-J.1    Matzeit, V.2    Schiller, B.3    Schell, J.4    Gronenborn, B.5
  • 36
    • 0024799254 scopus 로고
    • High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier
    • Schiestl RH, Gietz D: High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier. Curr Genet 16: 339-346 (1989).
    • (1989) Curr Genet , vol.16 , pp. 339-346
    • Schiestl, R.H.1    Gietz, D.2
  • 37
    • 0029882332 scopus 로고    scopus 로고
    • An in vitro assay of β-galactosidase from yeast
    • Schneider S, Buchert M, Hovens CM: An in vitro assay of β-galactosidase from yeast. BioTechniques 20: 960-962 (1996).
    • (1996) BioTechniques , vol.20 , pp. 960-962
    • Schneider, S.1    Buchert, M.2    Hovens, C.M.3
  • 38
    • 0029844843 scopus 로고    scopus 로고
    • Interactions between geminivirus replication proteins
    • Settlage SB, Miller AB, Hanley-Bowdoin L: Interactions between geminivirus replication proteins. J Virol 70: 6790-6795 (1996).
    • (1996) J Virol , vol.70 , pp. 6790-6795
    • Settlage, S.B.1    Miller, A.B.2    Hanley-Bowdoin, L.3
  • 39
    • 0027177579 scopus 로고
    • Hydrophobic coiled coil domains regulate the subcellular localization of human heat shock factor 2
    • Sheldon LA, Kingston RE: Hydrophobic coiled coil domains regulate the subcellular localization of human heat shock factor 2. Genes Devel 7: 1549-1558 (1993).
    • (1993) Genes Devel , vol.7 , pp. 1549-1558
    • Sheldon, L.A.1    Kingston, R.E.2
  • 40
    • 0027463298 scopus 로고
    • Interactions among vertebrate helix-loop-helix proteins in yeast using the two-hybrid system
    • Staudinger J, Perry M, Elledge SJ, Olson EN: Interactions among vertebrate helix-loop-helix proteins in yeast using the two-hybrid system. J Biol Chem 268: 4608-4611 (1993).
    • (1993) J Biol Chem , vol.268 , pp. 4608-4611
    • Staudinger, J.1    Perry, M.2    Elledge, S.J.3    Olson, E.N.4
  • 41
    • 0025827364 scopus 로고
    • Replicational release of geminivirus genomes from tandemly repeated copies: Evidence for rolling-circle replication of a plant viral DNA
    • Stenger DC, Revington GN, Stevenson MC, Bisaro DM: Replicational release of geminivirus genomes from tandemly repeated copies: evidence for rolling-circle replication of a plant viral DNA. Proc Natl Acad Sci USA 88: 8029-8033 (1991).
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 8029-8033
    • Stenger, D.C.1    Revington, G.N.2    Stevenson, M.C.3    Bisaro, D.M.4
  • 42
    • 0024315267 scopus 로고
    • Molecular mechanisms of transcriptional regulation in yeast
    • Struhl K: Molecular mechanisms of transcriptional regulation in yeast. Annu Rev Biochem 58: 1051-1077 (1989).
    • (1989) Annu Rev Biochem , vol.58 , pp. 1051-1077
    • Struhl, K.1
  • 43
    • 0029559463 scopus 로고
    • Yeast transcriptional regulatory mechanisms
    • Struhl K: Yeast transcriptional regulatory mechanisms. Annu Rev Genet 29: 651-674 (1995).
    • (1995) Annu Rev Genet , vol.29 , pp. 651-674
    • Struhl, K.1
  • 44
    • 0026004147 scopus 로고
    • Transactivation in a geminivirus: AL2 gene product is needed for coat protein expression
    • Sunter G, Bisaro DM: Transactivation in a geminivirus: AL2 gene product is needed for coat protein expression. Virology 180: 416-419 (1991).
    • (1991) Virology , vol.180 , pp. 416-419
    • Sunter, G.1    Bisaro, D.M.2
  • 45
    • 0026938976 scopus 로고
    • Transactivation of geminivirus AR1 and BR1 gene expression by the viral AL2 gene product occurs at the level of transcription
    • Sunter G, Bisaro DM: Transactivation of geminivirus AR1 and BR1 gene expression by the viral AL2 gene product occurs at the level of transcription. Plant Cell 4: 1321-1331 (1992).
    • (1992) Plant Cell , vol.4 , pp. 1321-1331
    • Sunter, G.1    Bisaro, D.M.2
  • 46
    • 0027261098 scopus 로고
    • Tomato golden mosaic virus leftward gene expression: Autoregulation of geminivirus replication protein
    • Sunter G, Hartitz MD, Bisaro DM: Tomato golden mosaic virus leftward gene expression: autoregulation of geminivirus replication protein. Virology 195: 275-280 (1993).
    • (1993) Virology , vol.195 , pp. 275-280
    • Sunter, G.1    Hartitz, M.D.2    Bisaro, D.M.3
  • 48
    • 0029315367 scopus 로고    scopus 로고
    • Human Papillomavirus E6 and E7: Proteins which deregulate the cell cycle
    • Tommasino M, Crawford L: Human Papillomavirus E6 and E7: proteins which deregulate the cell cycle. BioEssays 17: 509-518 (1997).
    • (1997) BioEssays , vol.17 , pp. 509-518
    • Tommasino, M.1    Crawford, L.2
  • 49
    • 0027522642 scopus 로고
    • The acidic activation domains of the GCN4 and GAL4 proteins are not α helical but form β-sheets
    • Van Hoy M, Leuther KK, Kodadek T, Johnston SA: The acidic activation domains of the GCN4 and GAL4 proteins are not α helical but form β-sheets. Cell 72: 587-594 (1993).
    • (1993) Cell , vol.72 , pp. 587-594
    • Van Hoy, M.1    Leuther, K.K.2    Kodadek, T.3    Johnston, S.A.4
  • 50
    • 0027236269 scopus 로고
    • Interactions of human papillomavirus transforming proteins with the products of tumor suppressor genes
    • Vousden K: Interactions of human papillomavirus transforming proteins with the products of tumor suppressor genes. FASEB J 7: 872-879 (1993).
    • (1993) FASEB J , vol.7 , pp. 872-879
    • Vousden, K.1
  • 51
    • 0027320426 scopus 로고
    • The retinoblastoma gene: Role in cell cycle control and cell differentiation
    • Wiman KG: The retinoblastoma gene: role in cell cycle control and cell differentiation. FASEB J 7: 841-845 (1993).
    • (1993) FASEB J , vol.7 , pp. 841-845
    • Wiman, K.G.1
  • 52
    • 0031467945 scopus 로고    scopus 로고
    • Splicing features in maize streak virus virion- and complementary-sense gene expression
    • Wright E, Heckel T, Groenendijk J, Davies JW, Boulton MI: Splicing features in maize streak virus virion- and complementary-sense gene expression. Plant J 12: 1285-1297 (1997)
    • (1997) Plant J , vol.12 , pp. 1285-1297
    • Wright, E.1    Heckel, T.2    Groenendijk, J.3    Davies, J.W.4    Boulton, M.I.5
  • 53
    • 0029842243 scopus 로고    scopus 로고
    • Plant cells contain a novel member of the retinoblastoma family of growth regulatory proteins
    • Xie Q, Sanz-Burgos A, Hannon GJ, Gutiérrez C: Plant cells contain a novel member of the retinoblastoma family of growth regulatory proteins. EMBO J 15: 4900-4908 (1996).
    • (1996) EMBO J , vol.15 , pp. 4900-4908
    • Xie, Q.1    Sanz-Burgos, A.2    Hannon, G.J.3    Gutiérrez, C.4
  • 54
    • 0029124903 scopus 로고
    • Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus: Requirement for efficient viral DNA replication
    • Xie Q, Suárez-López P, Gutiérrez C: Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus: requirement for efficient viral DNA replication. EMBO J 14: 4073-4082 (1995).
    • (1995) EMBO J , vol.14 , pp. 4073-4082
    • Xie, Q.1    Suárez-López, P.2    Gutiérrez, C.3
  • 55
    • 0028924171 scopus 로고
    • Protein-peptide interactions analyzed with the yeast two-hybrid system
    • Yang M, Wu Z, Fields S: Protein-peptide interactions analyzed with the yeast two-hybrid system. Nucl Acids Res 23: 1152-1156 (1995).
    • (1995) Nucl Acids Res , vol.23 , pp. 1152-1156
    • Yang, M.1    Wu, Z.2    Fields, S.3
  • 56
    • 0027160491 scopus 로고
    • The activity of the coat protein promoter of chloris striate mosaic virus is enhanced by its own and C1-C2 gene products
    • Zhan X, Richardson KA, Haley A, Morris BAM: The activity of the coat protein promoter of chloris striate mosaic virus is enhanced by its own and C1-C2 gene products. Virology 193: 498-502 (1993).
    • (1993) Virology , vol.193 , pp. 498-502
    • Zhan, X.1    Richardson, K.A.2    Haley, A.3    Morris, B.A.M.4
  • 57
    • 0028133417 scopus 로고
    • Dimerization through the helix-loop-helix motif enhances phosphorylation of the transcription activation domains of myogenin
    • Zhou J, Olson EN: Dimerization through the helix-loop-helix motif enhances phosphorylation of the transcription activation domains of myogenin. Mol Cell Biol 14: 6232-6243 (1994).
    • (1994) Mol Cell Biol , vol.14 , pp. 6232-6243
    • Zhou, J.1    Olson, E.N.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.