Molecular characterization of tobacco ribonucleotide reductase RNR1 and RNR2 cDNAs and cell cycle-regulated expression in synchronized plant cells

Plant Molecular Biology

Volumn 38, Issue 5, 1998, Pages 797-806

  Chabouté, Marie Edith ^a   Combettes, Bruno ^a   Clément, Bernadette ^a   Gigot, Claude ^a   Philipps, Gabriel ^a  

^a INST DE BIOL MOLEC DES PLANTES   (France)

Author keywords

Cell cycle; Gene expression; Ribonucleotide reductase; S phase; Tobacco BY2 cell suspension

Indexed keywords

CDNA LIBRARY; CELL CYCLE; DEOXYRIBONUCLEOTIDE; DNA SYNTHESIS; GENE EXPRESSION; MESSENGER RNA; PLANT CELL; RIBONUCLEOTIDE REDUCTASE; SOUTHERN BLOTTING;

EID: 0032215053     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006083318906     Document Type: Article

References (38)

1. Alschul SF, Gish W, Miller W, Myers EW, Lipman D: Basic local alignment search tool. J Mol Biol 215: 403-410 (1990).
2. Amara FM, Sun J, Wright JA: Defining a novel cis element in the 3′ untranslated region of mammalian ribonucleotide reductase component R2 mRNA. J Biol Chem 271: 20126-20131 (1996).
3. Björklund S, Skogman E, Thelander L: An S-phase specific release from a transcriptional block regulates the expression of mouse ribonucleotide reductase R2 subunit. EMBO J 11: 4953-4959 (1992).
4. Bornemann C, Drude K, Follmann H: Deoxyribonucleotide synthesis in green algae: cell cycle fluctuation of ribonucleotide reductase is only moderate in the unicellular, exsymbiotic green algae, Chlorella sp. pbi. J Plant Physiol 148: 657-661 (1996).
5. Chakbrabarti D, Schuster SM, Chakbrabarti R: Cloning and characterization of subunit genes of ribonucleotide reductase, a cell-cycle-regulated enzyme from Plasmodium falciparum. Proc Natl Acad Sci USA 90: 12020-12024 (1993).
6. Chen FY, Amara FM, Wright JA: Regulation of mammalian ribonucleotide reductase R1 mRNA stability is mediated by a ribonucleotide reductase R1 mRNA 3′-untranslated region cis-trans interaction through a protein kinase C-controlled pathway. Biochem J 302: 125-132 (1994).
7. Dai Y, Gold B, Vishwanatha JK, Rhode SL: Mimosine inhibits viral DNA synthesis through ribonucleotide reductase. Virology 205: 210-216 (1994).
8. Devereux JPH, Smithies O: A comprehensive set of sequence analysis programs for the VAX. Nucl Acids Res 12: 387-396 (1984).
9. Elledge SJ, Davis RW: Identification and isolation of the gene encoding the small subunit of ribonucleotide reductase from Saccharomyces cerevisiae: DNA damage-inducible gene required for mitotic viability. Mol Cell Biol 7: 2783-2793 (1987).
10. Elledge SJ, Davis RW: Two genes, differentially regulated in the cell cycle and by DNA-damaging agents encode alternative regulatory subunits of ribonucleotide reductase. Genes Devel 4: 740-751 (1990).
11. Elledge SJ, Zhou Z, Allen JB, Navas TA: DNA damage and cell cycle regulation of ribonucleotide reductase. BioEssays 15: 333-339 (1993).
12. Feller W, Follmann H: Ribonucleotide reductase activity in green algae. Biochem Biophys Res Commun 70: 752-758 (1976).
13. Goodall G, Wiebauer K, Filipowicz W: Analysis of premRNA processing in transfected protoplasts. Meth Enzymol 181: 148-161 (1990).
14. Greenberg GR, Hilfinger JM: Regulation of synthesis of ribonucleotide reductase and relationship to DNA replication in various systems. Prog Nucl Acid Res Mol Biol 53: 345-392 (1996).
15. Hasezawa S, Nagata T: Okadaid acid as a probe to analyse the cell cycle progression in plant cells. Bot Acta 105: 63-69 (1992).
16. Hurd HK, Roberts CW, Roberts JW: Identification of the gene for the yeast ribonucleotide reductase small subunit and its inducibility by methyl methanesulfonate. Mol Cell Biol 7: 3673-3677 (1987).
17. Johansson E, Skogman E, Thelander L: The TATA-less promoter of mouse ribonucleotide reductase R1 gene contains a TFII-I binding initiator element essential for cell cycle- regulated transcription. J Biol Chem 270: 30162-30167 (1995).
18. Kauppi B, Nielsen BB, Ramaswamy S, Kjoller Larsen I, Thelander M, L. T., Eklund H: The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2. J Mol Biol 262: 706-720 (1996).
19. Laquel P, Litvak S, Castroviejo M: Mammalian proliferating cell nuclear antigen1 stimulates the processivity of two wheat embryo DNA polymerases. Plant Physiol 102: 107-114 (1993).
20. Lepetit M, Ehling M, Atanassova R, Chaubet N, Gigot C: A plant histone promoter can direct both replication-dependent and -independent gene expression in transgenic plants. Mol Gen Genet 231: 276-285 (1992).
21. Lin H, Falchetto R, Mosca PJ, Shabanowitz J, Hunt DF, Hamlin JL: Mimosine targets serine hydroxymethyltransferase. J Biol Chem 271: 2548-2556 (1996).
22. Meijer L: Chemical inhibitors of cyclin-dependent kinases. Trends Cell Biol 6: 393-397 (1996).
23. Müller H, Wahl R, Kuntz I, Follmann H: Enzymatic ribonucleotide reduction in wheat. Hoppe-Seyler's Z Physiol Chem 354: 1299-1303 (1973).
24. Nagata T, Nemoto Y, Hazezawa S: Tobacco BY2 cell line as the 'Hela' cell in the cell biology of higher plants. Int Rev Cytol 132: 1-30 (1992).
25. Nyholm S, Thelander L, Gräslund A: Reduction and loss of the iron center in the reaction of the small subunit of mouse ribonucleotide reductase with hydroxyurea. Biochemistry 32: 11569-11574 (1993).
26. Philipps G, Clement B, Gigot C: Molecular characterization and cell cycle-regulated expression of a cDNA clone from Arabidopsis thaliana homologous to the small subunit of ribonucleotide reductase. FEBS Lett 358: 67-70 (1995).
27. Regad F, Herve C, Marinx O, Bergounioux C, Tremoussaygue D, Lescure B: The tef1 box, a ubiquitous cis-acting element involved in the activation of plant genes that are highly expressed in cycling cells. Mol Gen Genet 248: 703-711 (1995).
28. Reichard P: Interactions between deoxyribonucleotide and DNA synthesis. Annu Rev Biochem 57: 349-374 (1988).
29. Reichheld J-P, Chaubet N, Shen WH, Renaudin J-P, Gigot C: Multiple A-type cyclins express sequentially during the cell cycle in Nicotiana tabacum BY2 cells. Proc Natl Acad Sci USA 93: 13819-13824 (1996).
30. Reichheld JP, Sonobe S, Clement B, Chaubet N, Gigot C: Cell cycle-regulated histone gene expression in synchronized plant cells. Plant J 7: 245-252 (1995).
31. Sanger F, Nicklen S, Coulson AR: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463-5467 (1977).
32. Sauge-Merle S, Laulhere JP, Coves J, Le Pape L, Menage S, Fontecave M: Ribonucleotide reductase from the higher plant Arabidopsis thaliana: expression of the R2 component and characterization of its iron-radical center. J Biol Inorg Chem 2: 586-594 (1997).
33. Thelander L, Erikson L, Akerman M: Ribonucleotide reductase of calf thymus. J Biol Chem 255: 7426-7432 (1980).
34. Thelander M, Gräslund A, Thelander L: Subunit M2 of mammalian ribonucleotide reductase. Characterization of a homologous protein isolated from M2-overproducing mouse cells. J Biol Chem 260: 2737-2741 (1985).
35. Thomson JD, Higgins DG, Gibson TJ: Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 22: 4673-4680 (1994).
36. Uhlin U, Eklund H: Structure of ribonucleotide reductase protein R1. Nature 370: 533-539 (1994).
37. Zhou Z, Elledge SJ: Analysis of the DNA damage sensory pathway through the isolation and characterization of the CRT mutants, constitutive for RNR3 transcription. Genetics 131: 851-866 (1992).
38. Zimmermann JI, Goldberg RB: DNA sequence organization in the genome of Nicotiana tabacum. Chromosoma 59: 227-252 (1977).