Concordance analysis of microbial genomes

Nucleic Acids Research

Volumn 26, Issue 19, 1998, Pages 4482-4486

  Bruccoleri, Robert E ^a,b   Dougherty, Thomas J ^a   Davison, Daniel B ^a  

^a BRISTOL MYERS SQUIBB   (United States)

^b RUTGERS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; GENE PRODUCT; QUINOLINE DERIVED ANTIINFECTIVE AGENT;

AMINO ACID SEQUENCE; ARTICLE; COMPUTER PROGRAM; DATA BASE; GENETIC ANALYSIS; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY;

BACTERIA; DATABASES, FACTUAL; GENES, BACTERIAL; GENOME, BACTERIAL; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS);

EID: 0032189860     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.19.4482     Document Type: Article

References (25)

1. Cohen, M.L. (1994) Trends Microbiol., 2, 422-425.
2. Corvalin, P. (1996) J. Antimicrob. Chemother., 37, 855-869.
3. Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., Kerlavage, A.R., Bult, C.J., Tomb, J.-F., Dougherty, B.A., Merrick, J.M., et al. (1995) Science, 269, 496-512.
4. Fraser, C.M. Gocayne, J.D., White, O., Adams, M.D., Clayton, R.A., Fleischmann, R.D., Bult, C.J., Kerlavage, A.R., Sutton, G., Kelley, J.M., et al. (1995) Science, 270, 397-403.
5. Goffeau, A., Barrell, B.G., Bussey, H., Davis, R.W., Dujon, B., Feldmann, H., Galibert, F., Hoheisel, J.D., Jacq, C., Johnston, M., et al. (1996) Science, 274, 546-567.
6. Bult, C.J., White, O., Olsen, G.J., Zhou, L., Fleischmann, R.D., Sutton, G.G., Blake, J.A., FitzGerald, L.M., Clayton, R.A., Gocayne, J.D., et al. (1996) Science, 273, 1058-1073.
7. Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S., et al. (1996) DNA Res., 3, 109-136.
8. Himmelreich, R., Hilbert, H., Plagens, H., Pirkl, E., Li, B.C. and Herrmann, R. (1996) Nucleic Acids Res., 24, 4420-4449.
9. Blattner, F.R., Plunkett, III, G., Bloch, C.A., Perna, N.T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J.D., Rode, C.K., Mayhew, G.F., et al. (1997) Science, 277, 1453-1474.
10. Smith, D.R., Doucette-Stamm, L.A., Deloughery, C., Lee, H., Dubois, J., Aldredge, T., Bashirzadeh, R., Blakely, D., Cook, R., Gilbert, K., et al. (1997) J. Bacteriol., 179, 7135-7155.
11. Klenk, H.-P., Clayton, R.A., Tomb, J.F., White, O., Nelson, K.E., Ketchum, K.A., Dodson, R.J., Gwinn, M., Hickey, E.K., Peterson, J.D., et al. (1997) Nature, 390, 364-370.
12. Tomb, J.F., White, O., Kerlavage, A.R., Clayton, R.A., Sutton, G.G., Fleischmann, R.D., Ketchum, K.A., Klenk, H.P., Gill, S., Dougherty, B.A., et al. (1997) Nature, 388, 539-547.
13. Fraser, C.M., Casjens, S., Huang, W.M., Sutton, G.G., Clayton, R., Lathigra, R., White, O., Ketchum, K.A., Dodson, R., Hickey, E.K., et al. (1997) Nature, 390, 580-586.
14. Kunst, F., Ogasawara, N., Moszer, I., Albertini, A.M., Alloni, G., Azevedo, V., Bertero, M.G., Bessieres, P., Bolotin, A., Borchert, S., et al. (1997) Nature, 390, 249-256.
15. Deckert, G., Warren, P.V., Gaasterland, T., Young, W.G., Lenox, A.L., Graham, D.E., Overbeek, R., Snead, M.A., Keller, M., Aujay, M., et al. (1998) Nature, 392, 353-358.
16. Tatusov, R.L., Koonin, E.V. and Lipman, D.J. (1997) Science, 278, 631-637.
17. Stonebraker, M. Rowe, L.A. and Hirohama, M. (1990) IEEE Trans. Knowl. Data Eng., 2, 125-142.
18. Wall, L., Christiansen, T., Schwartz, R.L. and Potter, S. (1996) Programming Perl. O'Reilly & Associates, Inc., 2nd edition.
19. Pearson, W.R. and Lipman, D.J. (1988) Proc. Natl Acad. Sci. USA, 85, 2444-2448.
20. Henikoff, S. and Henikoff, J.G. (1992) Proc. Natl Acad. Sci. USA, 89, 10915-10919.
21. Dayhoff, M.O. (1978) Atlas of Protein Sequence and Structure, Supplement 3, Volume 5. National Biomedical Research Foundation, Washington, DC.
22. Elmasri, R. and Navathe, S.B. (1994) Fundamentals of Database Systems. Addison-Wesley, 2nd edition.
23. Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) Nucleic Acids Res., 22, 4673-4680.
24. Fisher, L.M., Lawrence, J.M., Josty, I.C., Hopewell, R., Margerrison, E.E. and Cullen, M.E. (1989) Am J. Med., 87, 2S-8S.
25. Badger, J.H. and Olsen, G.J. (1998) Mol. Biol. Evol., in press.