Host proteins can stimulate Tn7 transposition: A novel role for the ribosomal protein L29 and the acyl carrier protein

EMBO Journal

Volumn 17, Issue 19, 1998, Pages 5822-5831

  Sharpe, Pamela L ^a   Craig, Nancy L ^a  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Acyl carrier protein (ACP); Ribosomal protein L29; Target site selection; Transposon Tn7

Indexed keywords

ACYL CARRIER PROTEIN; DNA BINDING PROTEIN; RIBOSOME PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHROMOSOME INSERTION; DNA TRANSPOSITION; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; TRANSPOSON;

ACYL CARRIER PROTEIN; BACTERIAL PROTEINS; DNA TRANSPOSABLE ELEMENTS; ESCHERICHIA COLI; RECOMBINATION, GENETIC; RIBOSOMAL PROTEINS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; PROKARYOTA;

EID: 0032189817     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/17.19.5822     Document Type: Article

References (38)

1. Bachmann, B.J. (1972) Pedigrees of some mutant strains of Escherichia coli K-12. Bacteriol. Rev., 36, 525-557.
2. Bainton, R., Gamas, P. and Craig, N.L. (1991) Tn7 transposition in vitro proceeds through an excised transposon intermediate generated by staggered breaks in DNA. Cell, 65, 805-816.
3. Bainton, R.J., Kubo, K.M., Feng, J.N. and Craig, N.L. (1993) Tn7 Transposition: Target DNA recognition is mediated by multiple Tn7-encoded proteins in a purified in vitro system. Cell, 72, 931-943.
4. Barth, P.T., Datta, N., Hedges, R.W. and Grinter, N.J. (1976) Transposition of a deoxyribonucleic acid sequence encoding trimethoprim and streptomycin resistances from R483 to other replicons. J. Bacteriol., 125, 800-810.
5. Bitar, K.G. (1975) The primary structure of the ribosomal protein L29 from Escherichia coli. Biochim. Biophys. Acta, 386, 99-106.
6. Craig, N.L. (1991)Tn7: A target site-specific transposon. Mol. Microbiol., 5, 2569-2573.
7. Craig, N.L. (1997) Target site selection in transposition. Annu. Rev. Biochem., 66, 437-474.
8. Cronan, J.E., Jr and Rock, C.O. (1996) Biosynthesis of membrane lipids. In Neidhardt, F.C., Curtiss, R., III, Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E. (eds), Escherichia coli and Salmonella Cellular and Molecular Biology. ASM Press, Washington, D.C., pp. 612-636.
9. Dabbs, E.R. (1979) Selection for Escherichia coli mutants with proteins missing from the ribosome. J. Bacteriol., 140, 734-737.
10. Das, A., Ghosh, B., Barik, S. and Wolska, K. (1985) Evidence that ribosomal protein S10 itself is a cellular component necessary for transcription antitermination by phage λ N protein. Proc. Natl Acad. Sci. USA. 82, 4070-4074.
11. DeBoy, R.T. and Craig, N.L. (1996) Tn7 transposition as a probe of cis interaction between widely separated (190 kilobases apart) DNA sites in the Escherichia coli chromosome. J. Bacteriol., 178, 6184-6191.
12. Dersch, P., Schmidt, K. and Bremer, E. (1993) Synthesis of the Escherichia coli K-12 nucleoid-associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation. Mol. Microbiol., 8, 875-889.
13. Ghrayeb, J., Kimura, H., Takahara, M., Hsiung, H., Masui, Y. and Inouye, M. (1984) Secretion cloning vectors in Escherichia coli. EMBO J., 3, 2437-2442.
14. Hughes, O. (1993) Host components of Tn7 transposition. PhD. thesis. University of California, San Francisco, San Francisco.
15. Issartel, J.P., Koronakis, V. and Huges, C. (1991) Activation of Escherichia coli prohaemolysin to the mature toxin by acyl carrier protein-dependent fatty acylation. Nature, 351, 759-761.
16. Jackowski, S. and Rock, C.O. (1981) Regulation of coenzyme A biosynthesis. J. Bacteriol., 148, 926-932.
17. Kirchner, J., Connolly, C.M. and Sandmeyer, S.B. (1995) Requirement of RNA polymerase III transcription factors for in vitro position-specific integration of a retroviruslike element. Science, 267, 1488-1491.
18. Kubo, K.M. and Craig, N.L. (1990) Bacterial transposon Tn7 utilizes two different classes of target sites. J. Bacteriol., 172, 2774-2778.
19. Lichtenstein, C. and Brenner, S. (1981) Site-specific properties of Tn7 transposition into the E.coli chromosome. Mol. Gen. Genet., 183, 380-387.
20. Maekawa, T., Yanagihara, K. and Ohtsubo, E. (1996) Specific nicking at the 3′ ends of the terminal inverted repeat sequences in transposon Tn3 by transposase an E.coli protein ACP. Genes Cells, 1, 1017-1030.
21. Magnuson, K., Jackowski, S., Rock, C.O. and Cronan, J.E., Jr (1993) Regulation of Fatty Acid Biosynthesis in Escherichia coli. Microbiol. Rev., 57, 522-542.
22. May, E.W. and Craig, N.L. (1996) Switching from cut-and-paste to replicative Tn7 transposition. Science, 272, 401-404.
23. Noller, H.F. and Nomura, M. (1996) Ribosomes. In Neidhardt, F.C., Curtiss, R., III, Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Rilcy, M., Schaechter, M. and Umbarger, H.E.(eds), Escherichia coli and Salmonella Cellular and Molecular Biology. ASM Press, Washington, D.C., pp. 167-186.
24. Orle, K.A. and Craig, N.L. (1991) Identification of transposition proteins encoded by the bacterial transposon Tn7. Gene, 104, 125-131.
25. Raetz, C.R. (1996) Bacterial lipopolysaccharides: a remarkable family of bioactive macroamphiles. In Neidhardt, F.C., Curtiss, R., III, Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M. and Umbarger, H.E. (eds), Escherichia coli and Salmonella Cellular and Molecular Biology. ASM Press, Washington, D.C., pp. 1035-1063.
26. Rock, C.O. and Cronan, J.E., Jr (1981) Acyl Carrier Protein from Escherichia coli. Methods Enzymol., 71, 341-351.
27. Rogers, M., Ekaterinaki, E., Nimmo, E. and Sherrat, D. (1986) Analysis of Tn7 transposition. Mol. Gen. Genet., 205, 550-556.
28. Sakai, J. and Kleckner, N. (1997) The Tn10 Synaptic complex can capture a target DNA only after transposon excision. Cell, 89, 205-214.
29. Sakai, J. and Chalmers, R.M. and Kleckner, N. (1995) Identification and characterization of pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition. EMBO J., 14, 4374-4383.
30. Sarnovsky, R.J., May, E.W. and Craig, N.L. (1996) The Tn7 transposase is a heteromeric complex in which DNA breakage and joining activities are distributed between gene products. EMBO J., 15, 6348-6361.
31. Shand, R.F. Miercke, L.J.W., Mitra, A.K., Fong, S.K., Stroud, R.M. and Betlack, M.C. (1991) Wild-type and mutant bacterioopsins D85N, D96N, R82Q: high level expression in Escherichia coli. Biochemistry. 30, 3082-3088.
32. Stellwagen, A.E. and Craig, N.L. (1997) Gain-of-function mutation in TnsC, an ATP-dependent transposition protein that activates that bacterial transposon Tn7. Genetics, 145, 573-585.
33. Urlaub, H., Kruft, V., Bischof, O., Muller, E. and Wittmann-Liebold, B. (1995) Protein-rRNA binding features and their structural and functional implications in ribosomes as determined by cross-linking studies. EMBO J., 14, 4578-4588.
34. Wada, M.. Kano, Y., Ogawa, T., Okazaki, T. and Imamoto, F. (1988) Construction and characterization of the deletion mutant of hupA and hupB genes in Escherichia coli. J. Mol. Biol., 204, 581-591.
35. Waddell, C.S. and Craig, N.L. (1988) Two transposition pathways directed by five Tn7-encoded genes. Genes Dev., 2, 137-149.
36. Wittmann-Liebold, B., Uhlein, M., Urlaub, H., Muller, E., Otto, A. and Bischof, O. (1995) Structural and functional implications in the eubacterial ribosome as revealed by protein-rRNA and antibiotic contact sites. Biochem. Cell Biol. 73, 1187-1197.
37. Wolkow, C.A., DeBoy, R.T. and Craig, N.L. (1996) Conjugating plasmids are preferred targets for Tn7. Genes Dev., 10, 2145-2157.
38. Wool, I.G. (1996) Extraribosomal functions of ribosomal proteins. Trends Biochem. Sci., 245, 164-165.