The isolation and mapping of disease resistance gene analogs in maize

Molecular Plant-Microbe Interactions

Volumn 11, Issue 10, 1998, Pages 968-978

  Collins, N C ^a   Webb, C A ^b   Seah, S ^a,c   Ellis, J G ^a   Hulbert, S H ^b   Pryor, A ^a  

^a CSIRO   (Australia)

^b KANSAS STATE UNIVERSITY   (United States)

^c UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

CLONED GENE; DELETION MUTANT; DISEASE RESISTANCE; GENE ISOLATION; GENE MAPPING; GENE PROBE; MAIZE; NUCLEIC ACID HYBRIDIZATION; NUCLEOTIDE SEQUENCE; OLIGONUCLEOTIDE; PLANT GENOME; POLYMERASE CHAIN REACTION; PRIMER DNA; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

FUNGI; TRITICUM AESTIVUM; ZEA MAYS;

EID: 0032189246     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI.1998.11.10.968     Document Type: Article

References (56)

1. Aarts, M. G. M., te Lintel Hekkert, B., Holub, E. B., Beynon, J. L., Stiekema, W. J., and Pereira, A. 1998. Identification of R-gene homologous DNA fragments genetically linked to disease resistance loci in Arabidopsis thaliana. Mol. Plant-Microbe Interact. 11:251-258.
2. Anderson, P. A., Lawrence, G. J., Morrish, B. C., Ayliffe, M. A., Finnegan, E. J., and Ellis, J. G. 1997. Inactivation of the flax rust resistance gene M associated with loss of a repeated unit within the leucine-rich repeat coding region. Plant Cell 9:641-651.
3. Bent, A. F., Kunkel, B. N., Dahlbeck, D., Brown, K. L., Schmidt, R., Giraudat, J., Leung, J., and Staskawicz, B. J. 1994. RPS2 of Arabidopsis thaliana: A leucine-rich repeat class of plant disease resistance genes. Science 265:1856-1860.
4. Bentolila, S., Guitton, C., Bouvet, N., Sailland, A., Nykaza, S., and Freyssinet, G. 1991. Identification of an RFLP marker tightly linked to the Ht1 gene in maize. Theor. Appl. Genet. 82:393-398.
5. Burr, B., and Burr, F. A. 1991. Recombinant inbreds for molecular mapping in maize: Theoretical and practical considerations. Trends Genet. 7:55-60.
6. Chourey, P. S., and Zurawski, D. B. 1981. Callus formation from protoplasts of a maize cell culture. Theor. Appl. Genet. 59:341-344.
7. Coe, E., Davis, G., McMullen, M., Musket, T., and Polacco, M. 1995. RFLP and genetic maps. Maize Genet. Coop. Newsl. 69:191-256.
8. Coe, E. H., Jr., and Neuffer, M. G. 1977. The genetics of corn. Pages 111-223 in: Corn and Corn Improvement. G. F. Sprague, ed. American Society of Agronomy, Madison, WI.
9. Devereux, J., Haeberli, P., and Smithies, O. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12: 387-395.
10. Dixon, M. S., Jones, D. A., Keddie, J. S., Thomas, C. M., Harrison, K., and Jones, J. D. G. 1996. The tomato Cf-2 disease resistance locus comprises two functional genes encoding leucine-rich repeat proteins. Cell 84:451-459.
11. Feinberg, A. P., and Vogelstein, B. 1983. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132:6-13.
12. 2 population. Genetics 134:917-930.
13. Gish, W., and States, D. J. 1993. Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-272.
14. Grant, M. R., Godiard, L., Straube, E., Ashfield, T., Lewald, J., Sattler, A., Innes, R. W., and Dangl, J. L. 1995. Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance. Science 269: 843-846.
15. Hooker, A. L. 1985. Corn and sorghum rusts. Pages 207-236 in: The cereal rusts. Vol. II. Diseases, Distribution, Epidemiology, and Control. A. P. Roelfs and W. R. Bushnell, eds. Academic Press, Orlando, FL.
16. Hooker, A. L., and Saxena, K. M. S. 1971. Genetics of disease resistance in plants. Annu. Rev. Genet. 5:407-424.
17. Hulbert, S. H., and Bennetzen, J. L. 1991. Recombination at the Rp1 locus of maize. Mol. Gen. Genet. 226:377-382.
18. Johal, G., and Briggs, S. P. 1990. Placement of hm1 on the Pioneer RFLP map. Maize Genet. Coop. Newsl. 64:37.
19. Johal, G. S., and Briggs, S. P. 1992. Reductase activity encoded by the HM1 disease resistance gene in maize. Science 258:985-987.
20. Jones, D. A., Thomas, C. M., Hammond-Kosack, K. E., Balint-Kurti, P. J., and Jones, J. D. G. 1994. Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging. Science 266: 789-793.
21. Jung, M., Weldekidan, T., Schaff, D., Paterson, A., Tingey, S., and Hawk, J. 1994. Generation-means analysis and quantitative trait locus mapping of anthracnose stalk rot genes in maize. Theor. Appl. Genet. 89:413-418.
22. Kanazin, V., Marek, L. F., and Shoemaker, R. C. 1996. Resistance gene analogs are conserved and clustered in soybean. Proc. Natl. Acad. Sci. USA 93:11746-11750.
23. Kyetere, D., Ming, R., McMullen, M., Pratt, R., Brewbaker, J., Musket, T., Pixley, K., and Moon, H. 1995. Monogenic tolerance to maize streak virus maps to the short arm of chromosome 1. Maize Genet. Coop. Newsl. 69:136-137.
24. Lagudah, E. S., Moullet, O., and Appels, R. 1997. Map-based cloning of a gene sequence encoding a nucleotide-binding domain and a leucine-rich region at the Cre3 nematode resistance locus of wheat. Genome 40:659-665.
25. Lander, E. S., Green, P., Abrahamson, J., Barlow, A., Daly, M. J., Lincoln, S. E., and Newberg, L. 1987. MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181.
26. Lawrence, G. J., Finnegan, E. J., Ayliffe, M. A., and Ellis, J. G. 1995. The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistance gene N. Plant Cell 7:1195-1206.
27. Leister, D., Ballvora, A., Salamini, F., and Gebhart, C. 1996. A PCR-based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Nat. Genet. 14:421-429.
28. Leister, D., Kurth, J., Laurie, D. A., Yano, M., Sasaki, T., Devos, K., Graner, A., and Schulze-Lefert, P. 1998. Rapid reorganization of resistance gene homologues in cereal genomes. Proc. Natl. Acad. Sci. USA 95:370-375.
29. Martin, G. B., Brommonschenkel, S. H., Chunwongse, J., Frary, A., Ganal, M. W., Spivey, R., Wu, T., Earle, E. D., and Tanksley, S. D. 1993. Map-based cloning of a protein kinase gene conferring disease resistance in tomato. Science 262:1432-1436.
30. McMullen, M. D., Jones, M. W., Simcox, K. D., and Louie, R. 1994. Three genetic loci control resistance to wheat streak mosaic virus in the maize inbred Pa405. Mol. Plant-Microbe Interact. 7:708-712.
31. McMullen, M. D., and Simcox, K. D. 1995. Genomic organization of disease and insect resistance genes in maize. Mol. Plant-Microbe Interact. 8:811-815.
32. Mindrinos, M., Katagiri, F., Yu, G.-L., and Ausubel, F. M. 1994. The A. thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats. Cell 78:1089-1099.
33. Ming, R., Brewbaker, J. L., Pratt, R. C., Musket, T. A., and McMullen, M. D. 1997. Molecular mapping of a major gene conferring resistance to maize mosaic virus. Theor. Appl. Genet. 95:271-275.
34. Nelson, O. E., and Ullstrup, A. J. 1964. Resistance to leaf spot in maize: Genetic control of resistance to race 1 of Helminthosporium carbonum Ull. J. Hered. 55:195-199.
35. Ori, N., Eshed, Y., Paran, I., Presting, G., Aviv, D., Tanksley, S., Zamir, D., and Fluhr, R. 1997. The I2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-rich repeat superfamily of plant resistance genes. Plant Cell 9:521-532.
36. Parker, J. E., Coleman, M. J., Szabò, V., Frost, L. N., Schmidt, R., van der Biezen, E. A., Moores, T., Dean, C., Daniels, M. J., and Jones, J. D. G. 1997. The Arabidopsis downy mildew resistance gene RPP5 shares similarity to the Toll and Interleukin-1 receptors with N and L6. Plant Cell 9:879-894.
37. Pryor, A. 1993. Transposon tagging of a rust resistance gene in maize. Pages 469-476 in: Advances in Molecular Genetics of Plant-Microbe Interactions. Vol. 2. E. W. Nestler and D. P. S. Verma, eds. Kluwer Academic, Dordrecht, The Netherlands.
38. Saghai-Maroof, M. A., Soliman, K. M., Jorgensen, R. A., and Allard, R. W. 1984. Ribosomal DNA spacer-length polymorphism in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc. Natl. Acad. Sci. USA 81:8014-8018.
39. Sambrook, J., Fritsch, E, F., and Maniatis, T. A. 1989. Molecular Cloning: A Laboratory Manual. 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
40. Sanz-Alferez, S., Richter, T. E., Hulbert, S. H., and Bennetzen, J. L. 1995. The Rp3 disease resistance gene of maize: Mapping and characterization of introgressed alleles. Theor. Appl. Genet. 91:25-32.
41. Saraste, M. Sibbald, P. R., and Wittinghofer, A. 1990. The P-loop - a common motif in ATP-and GTP-binding proteins. Trends. Biochem. Sci. 15:430-434.
42. Saxena, K. M. S., and Hooker, A. L. 1968. On the structure of a gene for disease resistance in maize. Proc. Natl. Acad. Sci. USA 61:1300-1305.
43. Seah, S., Sivasithamparam, K., Karakousis, A., and Lagudah, E. S. Cloning and characterisation of a family of disease resistance gene analogs from wheat and barley. Theor. Appl. Genet. (In press.)
44. Shen, K. A., Meyers, B. C., Islam-Faridi, M. N., Chin, D. B., Stelly, D. M., and Michelmore, R. W. (1998). Resistance gene candidates identified by PCR with degenerate oligonucleotide primers map to clusters of resistance gene in lettuce. Mol. Plant-Microbe Interact. 11:815-823.
45. Simcox, K. D., and Bennetzen, J. L. 1993. The use of molecular markers to study Setosphaeria turcica resistance in maize. Phytopathology 83:1326-1330.
46. Simcox, K. D., McMullen, M. D., and Louie, R. 1995. Co-segregation of the maize dwarf mosaic virus resistance gene, Mdm1, with the nucleolus organizer region in maize. Theor. Appl. Genet. 90:341-346.
47. Song, W.-Y. Wang, G.-L., Chen, L.-L., Kim, H.-S., Pi, L.-Y, Holsten, T., Gardner, J., Wang, B., Zhai, W.-X., Zhu, L.-H., Fauquet, C., and Ronald, P. 1995. A receptor kinase-like protein encoded by the rice disease resistance gene, Xa-21. Science 270:1804-1806.
48. Sudupak, M. A., Bennetzen, J. L., and Hulbert, S. H. 1993. Unequal exchange and meiotic instability of disease-resistance genes in the Rp1 region of maize. Genetics 133:119-125.
49. Traut, T. W. 1994. The functions and consensus motifs of nine types of peptide segments that form different types of nucleotide-binding sites. Eur. J. Biochem. 222:9-19.
50. Ullstrup, A. J. 1965. Inheritance and linkage of a gene determining resistance in maize to an American race of Puccinia polysora. Phytopathology 55:425-428.
51. Whitham, S., Dinesh-Kumar, S. P., Choi, D., Hehl, R., Corr, C., and Baker, B. 1994. The product of the tobacco mosaic virus resistance gene N; Similarity to Toll and the interleukin-1 receptor. Cell 78: 1101-1115.
52. Wilkinson, D. R., and Hooker, A. L. 1968. Genetics of reaction to Puccinia sorghi in ten corn inbred lines from Africa and Europe. Phytopathology 58:605-608.
53. Yoshimura, S., Yamanouchi, U., Katayose, Y., Toki, S., Wang, Z.-X., Kono, I., Kurata, N., Yano, M., Iwata, N., and Sasaki, T. 1998. Expression of Xa1, a bacterial blight-resistance gene in rice, is induced by bacterial inoculation. Proc. Natl. Acad. Sci. USA 95:1663-1668.
54. Yu, Y. G., Buss, G. R., and Saghai Maroof, M. A. 1996. Isolation of a superfamily of candidate disease-resistance genes from soybean based on a conserved nucleotide-binding site. Proc. Natl. Acad. Sci. USA 93:11751-11756.
55. Zaitlin, D., DeMars, S. J., and Gupta, M. 1992. Linkage of a second gene for NCLB resistance to molecular markers in maize. Maize Genet. Coop. Newsl. 66:69-70.
56. Zaitlin, D., DeMars, S., and Ma, Y. 1993. Linkage of rhm, a recessive gene for resistance to southern corn leaf blight, to RFLP marker loci in maize (Zea mays) seedlings. Genome 36:555-564.