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Volumn 10, Issue 2, 1998, Pages 191-201

Molecular Phylogenetics of the Avian GenusPipiloand a Biogeographic Argument for Taxonomic Uncertainty

Author keywords

Classification; Mitochondrial DNA; Phylogenetics; Sequence evolution; Towhees

Indexed keywords

PRIMER DNA;

EID: 0032174624     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1998.0526     Document Type: Article
Times cited : (38)

References (52)
  • 3
    • 0001631494 scopus 로고
    • Auk. 112:1995;819-830.
    • (1995) Auk , vol.112 , pp. 819-830
  • 5
    • 0002447606 scopus 로고    scopus 로고
    • Mitochondrial control-region sequences as tools for understanding the evolution of avian taxa
    • New York: Academic Press. p. 51-82
    • Baker A. J., Marshall H. D. Mitochondrial control-region sequences as tools for understanding the evolution of avian taxa. Avian Molecular Systematics and Evolution. 1997;Academic Press, New York. p. 51-82.
    • (1997) Avian Molecular Systematics and Evolution
    • Baker, A.J.1    Marshall, H.D.2
  • 6
    • 0000228672 scopus 로고
    • Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies
    • Ball R. M. Jr., Avise J. C. Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies. Auk. 109:1992;626-636.
    • (1992) Auk , vol.109 , pp. 626-636
    • Ball R.M., Jr.1    Avise, J.C.2
  • 7
    • 0002047502 scopus 로고
    • Speciation and its ontology: The empirical consequences of alternative species concepts for understanding patterns and processes of differentiation
    • D. Otte, & J.A. Endler. Sunderland: Sinauer
    • Cracraft J. Speciation and its ontology: The empirical consequences of alternative species concepts for understanding patterns and processes of differentiation. Otte D., Endler J. A. Speciation and Its Consequences. 1989;28-59 Sinauer, Sunderland.
    • (1989) Speciation and Its Consequences , pp. 28-59
    • Cracraft, J.1
  • 8
    • 0012388211 scopus 로고
    • Distribution and variation of the brown towhees
    • Davis J. Distribution and variation of the brown towhees. Univ. Calif. Publ. Zool. 52:1951;1-120.
    • (1951) Univ. Calif. Publ. Zool. , vol.52 , pp. 1-120
    • Davis, J.1
  • 9
    • 0025343497 scopus 로고
    • Sequence and gene organization of chicken mitochondrial genome. A novel gene order in higher vertebrates
    • Desjardins P., Morais R. Sequence and gene organization of chicken mitochondrial genome. A novel gene order in higher vertebrates. J. Mol. Biol. 212:1990;599-634.
    • (1990) J. Mol. Biol. , vol.212 , pp. 599-634
    • Desjardins, P.1    Morais, R.2
  • 10
    • 0009891132 scopus 로고
    • Comparison of phylogenies derived from two molecular data sets in the avian generaPipiloSpizella
    • Dodge A. G., Fry A. J., Blackwell R. C., Zink R. M. Comparison of phylogenies derived from two molecular data sets in the avian generaPipiloSpizella. Wilson Bull. 107:1995;641-654.
    • (1995) Wilson Bull. , vol.107 , pp. 641-654
    • Dodge, A.G.1    Fry, A.J.2    Blackwell, R.C.3    Zink, R.M.4
  • 12
    • 0000989175 scopus 로고
    • Gene trees and species trees: Molecular systematics as one-character taxonomy
    • Doyle J. J. Gene trees and species trees: Molecular systematics as one-character taxonomy. Syst. Bot. 17:1992;144-163.
    • (1992) Syst. Bot. , vol.17 , pp. 144-163
    • Doyle, J.J.1
  • 13
    • 0027501821 scopus 로고
    • Taxonomic congruence versus total evidence, and amniote phylogeny inferred from fossils, molecules, and morphology
    • Eernisse D. J., Kluge A. G. Taxonomic congruence versus total evidence, and amniote phylogeny inferred from fossils, molecules, and morphology. Mol. Biol. Evol. 10:1993;1170-1195.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 1170-1195
    • Eernisse, D.J.1    Kluge, A.G.2
  • 14
    • 0000668808 scopus 로고
    • Polymerase-chain-reaction (PCR) analysis of microsatellites - A new approach to studies of genetic relationships in birds
    • Ellegren H. Polymerase-chain-reaction (PCR) analysis of microsatellites - a new approach to studies of genetic relationships in birds. Auk. 109:1992;886-895.
    • (1992) Auk , vol.109 , pp. 886-895
    • Ellegren, H.1
  • 15
    • 0004175019 scopus 로고
    • Port Jefferson, New York
    • Farris, J. S. 1988, Hennig86, Port Jefferson, New York.
    • (1988) Hennig86
    • Farris, J.S.1
  • 16
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution. 39:1985;783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 17
    • 0004287108 scopus 로고
    • Univ. of Washington, Seattle
    • Felsenstein, J. 1993, PHYLIP, Univ. of Washington, Seattle.
    • (1993) PHYLIP
    • Felsenstein, J.1
  • 18
    • 0030125185 scopus 로고    scopus 로고
    • Molecular phylogenetics and biogeography of tanagers in the genusRamphocelus
    • Hackett S. J. Molecular phylogenetics and biogeography of tanagers in the genusRamphocelus. Mol. Phylogenet. Evol. 5:1996;368-382.
    • (1996) Mol. Phylogenet. Evol. , vol.5 , pp. 368-382
    • Hackett, S.J.1
  • 20
    • 0024258513 scopus 로고
    • Hybrid zones - Natural laboratories for evolutionary studies
    • Hewitt G. M. Hybrid zones - natural laboratories for evolutionary studies. Trends Ecol. Evol. 3:1988;158-166.
    • (1988) Trends Ecol. Evol. , vol.3 , pp. 158-166
    • Hewitt, G.M.1
  • 21
    • 0002063701 scopus 로고
    • Discriminating between phylogenetic signal and random noise in DNA sequences
    • M.M. Miyamoto, & J. Cracraft. New York: Academic Press
    • Hillis D. M. Discriminating between phylogenetic signal and random noise in DNA sequences. Miyamoto M. M., Cracraft J. Phylogenetic Analysis of DNA Sequences. 1991;278-294 Academic Press, New York.
    • (1991) Phylogenetic Analysis of DNA Sequences , pp. 278-294
    • Hillis, D.M.1
  • 22
    • 0027055554 scopus 로고
    • Signal, noise, and reliability in molecular phylogenetic analyses
    • Hillis D. M., Huelsenbeck J. P. Signal, noise, and reliability in molecular phylogenetic analyses. J. Hered. 83:1992;189-195.
    • (1992) J. Hered. , vol.83 , pp. 189-195
    • Hillis, D.M.1    Huelsenbeck, J.P.2
  • 23
    • 0002150997 scopus 로고    scopus 로고
    • Nucleic acids IV: Sequencing and cloning
    • D.M. Hillis, C. Mortiz, & B.K. Mable. Sunderland: Sinauer
    • Hillis D. M., Mable B. K., Larson A., Davis S. K., Zimmer E. A. Nucleic acids IV: Sequencing and cloning. Hillis D. M., Mortiz C., Mable B. K. Molecular Systematics. 1996;321-381 Sinauer, Sunderland.
    • (1996) Molecular Systematics , pp. 321-381
    • Hillis, D.M.1    Mable, B.K.2    Larson, A.3    Davis, S.K.4    Zimmer, E.A.5
  • 24
    • 0001713781 scopus 로고
    • Avian evolution in the aridlands of North America
    • Hubbard J. P. Avian evolution in the aridlands of North America. Living Bird. 12:1973;155-196.
    • (1973) Living Bird , vol.12 , pp. 155-196
    • Hubbard, J.P.1
  • 25
    • 0000233405 scopus 로고
    • Speciation in sapsuckers (Sphyrapicus
    • Johnson N. K., Zink R. M. Speciation in sapsuckers (Sphyrapicus. Auk. 100:1983;871-884.
    • (1983) Auk , vol.100 , pp. 871-884
    • Johnson, N.K.1    Zink, R.M.2
  • 26
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:1980;111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 27
    • 0024307824 scopus 로고
    • Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino H., Hasegawa M. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:1989;170-179.
    • (1989) J. Mol. Evol. , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 30
    • 0019373459 scopus 로고
    • The use of restriction endonucleases to measure mitochondrial DNA sequence relatedness in natural populations III. Techniques and potential applications
    • Lansman R. A., Shade R. O., Shapira J. F., Avise J. C. The use of restriction endonucleases to measure mitochondrial DNA sequence relatedness in natural populations III. Techniques and potential applications. J. Mol. Evol. 17:1981;214-216.
    • (1981) J. Mol. Evol. , vol.17 , pp. 214-216
    • Lansman, R.A.1    Shade, R.O.2    Shapira, J.F.3    Avise, J.C.4
  • 31
    • 0001250689 scopus 로고
    • The stochastic mode of molecular evolution: What consequences for systematic investigations
    • Lanyon S. M. The stochastic mode of molecular evolution: What consequences for systematic investigations. Auk. 105:1988;565-573.
    • (1988) Auk , vol.105 , pp. 565-573
    • Lanyon, S.M.1
  • 32
    • 0030120447 scopus 로고    scopus 로고
    • The simultaneous diversification of South American Echimyid rodents (Hystricognathi) based on complete cytochromeb
    • Lara M. C., Patton J. L., da Silva M. N. F. The simultaneous diversification of South American Echimyid rodents (Hystricognathi) based on complete cytochromeb. Mol. Phyl. Evol. 5:1996;403-413.
    • (1996) Mol. Phyl. Evol. , vol.5 , pp. 403-413
    • Lara, M.C.1    Patton, J.L.2    Da Silva, M.N.F.3
  • 33
    • 0040332819 scopus 로고
    • MacClade, Sinauer, Sunderland, MA
    • Maddison, W. P. Maddison, D. R. 1992, MacClade, Sinauer, Sunderland, MA.
    • (1992)
    • Maddison, W.P.1    Maddison, D.R.2
  • 34
    • 0002913985 scopus 로고
    • Species taxa of North American birds, a contribution to comparative systematics
    • Mayr E., Short L. L. Jr. Species taxa of North American birds, a contribution to comparative systematics. Publ. Nuttall Ornithol. Club. 9:1970;1-127.
    • (1970) Publ. Nuttall Ornithol. Club , vol.9 , pp. 1-127
    • Mayr, E.1    Short L.L., Jr.2
  • 35
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei M., Li W. H. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA. 76:1979;5269-5273.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 5269-5273
    • Nei, M.1    Li, W.H.2
  • 36
    • 0025694383 scopus 로고
    • Accuracy of estimated phylogenies: Effects of tree topology and evolutionary model
    • Rohlf F. J., Chang W. S., Sokal R. R., Kim K. J. Accuracy of estimated phylogenies: Effects of tree topology and evolutionary model. Evolution. 44:1990;1671-1684.
    • (1990) Evolution , vol.44 , pp. 1671-1684
    • Rohlf, F.J.1    Chang, W.S.2    Sokal, R.R.3    Kim, K.J.4
  • 37
    • 0000413758 scopus 로고
    • Measures of genetic similarity and genetic distance. Studies in Genetics VII
    • Rogers J. S. Measures of genetic similarity and genetic distance. Studies in Genetics VII. Univ. Texas Publ. 7213:1972;145-153.
    • (1972) Univ. Texas Publ. , vol.7213 , pp. 145-153
    • Rogers, J.S.1
  • 39
    • 0005131577 scopus 로고
    • Hybridization in the red-eyed towhees of Mexico: The populations of the southeastern plateau region
    • Sibley C. G., Sibley F. C. Hybridization in the red-eyed towhees of Mexico: The populations of the southeastern plateau region. Auk. 81:1964;479-504.
    • (1964) Auk , vol.81 , pp. 479-504
    • Sibley, C.G.1    Sibley, F.C.2
  • 40
    • 0039740889 scopus 로고
    • Hybridization in the rufous-sided towhees of the Great Plains
    • Sibley C. G., West D. A. Hybridization in the rufous-sided towhees of the Great Plains. Auk. 76:1959;326-338.
    • (1959) Auk , vol.76 , pp. 326-338
    • Sibley, C.G.1    West, D.A.2
  • 41
    • 0027951531 scopus 로고
    • Rooting molecular trees: Problems and strategies
    • Smith A. B. Rooting molecular trees: Problems and strategies. Biol. J. Linn. Soc. 51:1994;279-292.
    • (1994) Biol. J. Linn. Soc. , vol.51 , pp. 279-292
    • Smith, A.B.1
  • 43
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • D.M. Hillis, C. Moritz, & B.K. Mable. Sunderland: Sinauer
    • Swofford D. L., Olsen G. J., Waddell P. J., Hillis D. M. Phylogenetic inference. Hillis D. M., Moritz C., Mable B. K. Molecular Systematics. 1996;407-514 Sinauer, Sunderland.
    • (1996) Molecular Systematics , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 44
    • 0002134731 scopus 로고    scopus 로고
    • The use of mitochondrial DNA control region sequencing in conservation genetics
    • T.B. Smith, & R.K. Wayne. New York: Oxford Univ. Press
    • Taberlet P. The use of mitochondrial DNA control region sequencing in conservation genetics. Smith T. B., Wayne R. K. Molecular Genetic Approaches in Conservation. 1996;125-142 Oxford Univ. Press, New York.
    • (1996) Molecular Genetic Approaches in Conservation , pp. 125-142
    • Taberlet, P.1
  • 45
    • 0029348907 scopus 로고
    • Primers for amplification and determination of mitochondrial control-region sequences in oscine passerines
    • Tarr C. L. Primers for amplification and determination of mitochondrial control-region sequences in oscine passerines. Mol. Ecol. 4:1995;527-529.
    • (1995) Mol. Ecol. , vol.4 , pp. 527-529
    • Tarr, C.L.1
  • 47
    • 0001493734 scopus 로고
    • Genetic anomalies associated withCerion
    • Woodruff D. S. Genetic anomalies associated withCerion. Biol. J. Linn. Soc. 36:1989;281-294.
    • (1989) Biol. J. Linn. Soc. , vol.36 , pp. 281-294
    • Woodruff, D.S.1
  • 48
    • 0000387373 scopus 로고    scopus 로고
    • Nuclear integrations: Challenges for mitochondrial DNA markers
    • Zhang D-X., Hewitt G. M. Nuclear integrations: Challenges for mitochondrial DNA markers. Trends Ecol. Evol. 11:1996;247-251.
    • (1996) Trends Ecol. Evol. , vol.11 , pp. 247-251
    • Zhang, D-X.1    Hewitt, G.M.2
  • 49
    • 0002909881 scopus 로고
    • Evolution of Brown Towhees: Allozymes, morphometrics and species limits
    • Zink R. M. Evolution of Brown Towhees: Allozymes, morphometrics and species limits. Condor. 90:1988;72-82.
    • (1988) Condor , vol.90 , pp. 72-82
    • Zink, R.M.1
  • 50
    • 0031991249 scopus 로고    scopus 로고
    • Molecular systematics and biogeography of aridland gnatcatchers (GenusPolioptilaP. californica
    • Zink R. M., Blackwell R. C. Molecular systematics and biogeography of aridland gnatcatchers (GenusPolioptilaP. californica. Mol. Phylogenet. Evol. 9:1998;26-32.
    • (1998) Mol. Phylogenet. Evol. , vol.9 , pp. 26-32
    • Zink, R.M.1    Blackwell, R.C.2
  • 51
    • 0039955742 scopus 로고
    • Evolution of Brown Towhees: Mitochondrial DNA evidence
    • Zink R. M., Dittmann D. L. Evolution of Brown Towhees: Mitochondrial DNA evidence. Condor. 93:1991;98-105.
    • (1991) Condor , vol.93 , pp. 98-105
    • Zink, R.M.1    Dittmann, D.L.2
  • 52
    • 0029032827 scopus 로고
    • Evidence from molecular systematics for decreased avian diversification in the Pleistocene epoch
    • Zink R. M., Slowinski J. B. Evidence from molecular systematics for decreased avian diversification in the Pleistocene epoch. Proc. Natl. Acad. Sci. USA. 92:1995;5832-5835.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 5832-5835
    • Zink, R.M.1    Slowinski, J.B.2


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