DNA bound to polypyrrole films: High-resolution imaging, DNA binding kinetics and internal migration

Biomaterials

Volumn 19, Issue 18, 1998, Pages 1657-1667

  Pande, Rajiv ^a,d   Ruben, George C ^b   Lim, Jeong Ok ^c   Tripathy, Sukant ^a   Marx, Kenneth A ^a  

^a University of Massachusetts Lowell   (United States)

^b Dartmouth College   (United States)

^c Kyungpook National University School of Medicine   (South Korea)

^d NAVIX Inc   (United States)

Author keywords

DNA binding; Electron microscopy; Polypyrrole

Indexed keywords

ATOMIC FORCE MICROSCOPY; DNA; ELECTROCHEMICAL ELECTRODES; MOLECULAR STRUCTURE; PLASTIC FILMS; POLYPYRROLES; SURFACE ROUGHNESS; TRANSMISSION ELECTRON MICROSCOPY;

BINDING KINETICS; INTERNAL MIGRATION;

BIOMATERIALS;

DNA; POLYPYRROLE; SULFUR 35;

ARTICLE; BINDING KINETICS; DNA BINDING; ELECTROCHEMICAL ANALYSIS; FILM; PRIORITY JOURNAL; SURFACE PROPERTY; TRANSMISSION ELECTRON MICROSCOPY;

EID: 0032170246     PISSN: 01429612     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0142-9612(98)00043-X     Document Type: Article

References (29)

1. [1] Diaz AF, Hall B. Mechanical properties of electrochemically prepared polypyrrole films. IBM J Res Dev 1983;27:342-5.
2. [2] Diaz AF, Bargon J. Electrochemical synthesis of conducting polymers. In: Skotheim TA, editor. Handbook of conducting polymers. New York: Marcel Dekker, 1986;1:81.
3. [3] DeVreux F, Genoud F, Nechtschein M, Vilberet B. ESR investigation of polarons and bipolarons in conducting polymers: the case of polypyrrole. Synth Met 1987;18:89-93.
4. [4] Warren LF, Walker JA, Anderson DP, Rhodes CG, Buckley LJ. J Electrochem Soc 1989;136:2286.
5. [5] Yang R, Evans DF, Christensen L, Hendricksen WA. Scanning tunneling microscopy evidence of semicrystalline and helical conducting polymer structures. J Phys Chem 1990;94:6117-21.
6. [6] Chen Z, Chittibabu KG, Marx KA, Kumar J, Tripathy SK, Samuelson LA, Akkara J, Kaplan DL. Photodynamic protein incorporated in conducting polymer and sol-gel matrices: toward smart materials for information storage and processing. In: Varadan VK, editor. Smart materials and structures. Proc SPIE 1994;2189:105-15.
7. [7] Dong S, Ding J, Zhan R. Electron spin resonance studies of pyrroles in aqueous solution. J Chem Soc Faraday Trans 1989; 85(7):1599-602.
8. [8] Wnek GE, Prezyna LA, Lee JJ, Qiu Y-J, Reynolds JR. Interaction of polycationic proteins with electroactive polypyrrole/poly (styrene sulfonate) films. Polym Prepr (Am Chem Soc Div Polym Chem) 1989;30(2):178-80.
9. [9] Hodgson AJ, John MJ, Campbell T, Georgevich A, Woodhouse S, Aoki T, Ogata T, Wallace GG. Integration of biocomponents with synthetic structures-use of conducting polymer polyelectrolyte composite. Smart materials and technologies. Proc SPIE, 1996;2716:164-76.
10. [10] Marx KA, Lim JO, Minehan DS, Pande R, Kamath MN, Tripathy SK, Kaplan DL. Intelligent materials properties of DNA and strategies for its incorporation into electroactive polymeric thin film systems. J Intel Mat Sys Struct 1994;5:447-54.
11. [11] Pande R, Lim JO, Marx KA, Tripathy SK, Kaplan DL. Comparison of single and double stranded DNA binding to polypyrrole. Mat Res Soc Symp 1993;292:135-40.
12. [12] Minehan DS, Marx KA, Tripathy SK. Kinetics of DNA binding to electrically conducting polypyrrole films. Macromolecules 1994;27:777-83.
13. [13] Alva S, Marx KA, Samuelson LA, Kumar J, Tripathy SK, Kaplan DL. Novel immobilization techniques in the fabrication of efficient electrochemical biosensors. Smart materials technologies and biomimetics. Proc SPIE, 1996;2716:152-63.
14. [14] Samuelson LA, Pande R, Ayyagari M, Kamtekar S, Chittibabu KG, Gao H, Marx KA, Kumar J, Tripathy SK, Kaplan DL. Signal transduction composites: biomaterials with electroactive polymers. In: Salamone JC, editor. Polymeric materials encyclopedia: synthesis, properties and applications, polymer Science and technology series. The polymer Science and technology Series 1996;Q10:7612.
15. [15] Hall EAH. Biosensors. Englewood Cliffs, NJ: Prentice-Hall, 1991.
16. [16] Wong JY, Langer R, Ingber D. Electrically conducting polymers can noninvasively control the shape and growth of mammalian cells. Proc Natl Acad Sci USA 1994;91:3201-4.
17. [17] Schmidt CE, Shastri VR, Vacanti JP, Langer R. Stimulation of neurite outgrowth using an electrically conducting polymer. Proc Natl Acad Sci USA 1997;94:8948-53.
18. [18] Ruben GC, Ultrathin (1 nm) vertically shadowed Pt-C replicas for imaging individual molecules in freeze-etched biological DNA and materials science metal and plastic specimens. J Electr Micros Tech 1989;13:335-54.
19. [19] Ruben GC, Stockmayer WH. Evidence for Helical structures in poly(1-Olefin Sulfones) by transmission electron microscopy. Proc Natl Acad Sci USA 1992;89:11645-9.
20. [20] Marx KA, Ruben GC. Evidence for hydrated spermidine-calf thymus DNA toruses organized by circumferential DNA wrapping. Nucl Acids Res 1983;11:1839-53.
21. [21] Marx KA, Ruben GC. Studies of DNA organization in hydrated spermidine-condensed DNA toruses and spermidine-DNA fibres. J Biomol Str and Dyn 1984;1:1109-32.
22. [22] Marx KA, Ruben GC. A study of PhiX-174 DNA torus and lambda DNA torus tertiary structure and the implications for DNA self-assembly. J Biomol Str Dyn 1986;4:23-39.
23. [23] Marx KA. Toroidal DNA condensates; aspects of formation, structures, dynamics and biological implications. In: Structure and dynamics of biopolymers. NATOASI 1987;E133:137-68.
24. [24] Ruben GC. Replication methods. In: Robards AW, Wilson AJ, editors. Procedures in electron microscopy. Chichester: Wiley, 1997;4:2.1-85.
25. [25] Ruben GC, Pekala RW. High resolution transmission electron-microscopy of the nanostructure of Melamine-Formaldehyde aerogels. J Non-Crystal Solids 1995;186:219-31.
26. [26] Ruben GC, Hrubesh LW, Tillotson TM. High resolution transmission electron microscopy nanostructure of condensed silica aerogels. J Non-Crystal Solids 1995;186:209-18.
27. [27] Ruben GC. Vertical Pt-C replication, a revolution in imaging non-periodic macromolecules, biological gels and low density polymer networks. Micron 1997, in press.
28. [28] Witkowski A, Brajter-Toth, A. Overoxidized polypyrrole films: a model for the design of permselective electrodes. Anal Chem 1992;64:635-41.
29. [29] Palmisano F, Malitesta C, Centonze D, Zambonin PG. Correlation between permselectivity and chemical structure of overoxidized polypyrrole membranes used in electroproduced enzyme biosensors Anal Chem 1995;67:2207-11.