The Lotus japonicus LjNOD70 nodulin gene encodes a protein with similarities to transporters

Plant Molecular Biology

Volumn 37, Issue 4, 1998, Pages 651-661

  Szczyglowski, Krzysztof ^a   Kapranov, Philipp ^a   Hamburger, Dirk ^c   De Bruijn, Frans J ^a,b  

^a MICHIGAN STATE UNIVERSITY   (United States)

^b Michigan State University ^*  (United States)

^c UNIVERSITY OF LAUSANNE   (Switzerland)

Author keywords

Alternative splicing; Late nodulin; Lotus; Transporter

Indexed keywords

ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; EXON; FORMIC ACID; HYDROPHOBIC PROTEIN; INTRON; MESSENGER RNA; MOLECULAR WEIGHT; NODULATION; NODULIN GENE; OPEN READING FRAME; OXALIC ACID; OXALOBACTER FORMIGENES; TERMINAL REGION;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; BASE SEQUENCE; CARRIER PROTEINS; DNA PRIMERS; DNA, COMPLEMENTARY; DNA, PLANT; FABACEAE; GENE EXPRESSION; GENES, PLANT; INTRONS; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PLANT PROTEINS; PLANTS, MEDICINAL; RNA, MESSENGER; RNA, PLANT; SEQUENCE HOMOLOGY, AMINO ACID; TISSUE DISTRIBUTION;

EID: 0032128208     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006043428636     Document Type: Article

References (42)

1. Abe K, Ruan Z-S, Maloney PC: Cloning, sequencing, and expression in Escherichia coli of OxlT, the oxalate:formate exchange protein of Oxalobacter formigenes. J Biol Chem 27: 6789-6793 (1996).
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 215: 403-410 (1990).
3. Carlson RW, Price NPJ, Stacey G: The biosynthesis of rhizobial lipo-oligosaccharide nodulation signal molecules. Mol Plant-Microbe Interact 7: 684-695 (1995).
4. Csanadi G, Szecsi J, Kalo P, Kiss P, Endre G, Kondorosi A, Kondorosi E, Kiss GB: ENOD12, an early nodulin gene, is not required for nodule formation and efficient nitrogen fixation in alfalfa. Plant Cell 6: 201-213 (1995).
5. de Bruijn FJ, Schell J: Regulation of plant genes specifically induced in developing and mature nitrogen-fixing nodules: cisacting elements and trans-acting factors. In: Verma DPS (ed) Control of Plant Gene Expression, pp. 241-258. CRC Press, Boca Raton, FL (1992).
6. Damiani RD, Wessler SR: An upstream open reading frame represses expression of Lc, a member of the R/B family of maize transcriptional activators. Proc Natl Acad Sci USA 90: 8244-8248 (1993).
7. Delauney AJ, Verma DPS: Cloned nodulin genes for symbiotic nitrogen fixation. Plant Mol Biol Rep 6: 279-285 (1988).
8. Gamas P, Niebel F, de C, Lescure N, Cullimore J: Use of a substractive hybridization approach to identify new Medicago truncatula genes induced during root nodule development. Mol Plant-Microbe Interact 9: 233-242 (1996).
9. Gilbert W: Why genes in pieces? Nature 271: 501 (1978).
10. Goodall GJ, Filipowicz W: The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing. Cell 58: 473-483 (1989).
11. Heard J, Caspi M, Dunn K: Evolutionary diversity of symbiotically induced nodule MADS box genes: characterization of nmhC5, a member of a novel subfamily. Mol Plant-Microbe Interact 5: 665-676 (1997).
12. Heard J, Dunn K: Symbiotic induction of a MADS-box gene during development of alfalfa root nodules. Proc Natl Acad Sci USA 92: 5273-5277 (1995).
13. Henderson PJF: The 12-transmembrane helix transporters. Curr Opin Cell Biol 5: 708-721 (1993).
14. Jiang Q, Gresshoff PM: Classical and molecular genetics of the model legume Lotus japonicus. Mol Plant-Microbe Interact 1: 59-68 (1997).
15. Kapranov P, de Bruijn FJ, Szczyglowski K: A novel, highly expressed late nodulin gene LjNOD16 from Lotus japonicus. Plant Physiol 113: 1081-1090 (1997).
16. Kouchi H, Hata S: Isolation and characterization of novel cDNA representing genes expressed at early stages of soybean nodule development. Mol Gen Genet: 238: 106-119 (1993).
17. Kyte J, Doolittle RF: A simple method for displaying the hydropathic character of a protein. J Mol Biol 157: 105-132 (1982).
18. Lohmer S, Maddaloni M, Motto M, Salamini F, Thompson RD: Translation of the mRNA of the maize transcriptional activator opaque-2 is inhibited by upstream open reading frames present in the leader sequence. Plant Cell 5: 65-73 (1993).
19. Marger MD, Saier Jr MH: A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport. Trends Biochem Sci 18: 13-20 (1993).
20. Matvienko M, van de Sande K, Yang W-C, van Kammen A, Bisseling T, Franssen H: Comparison of soybean and pea ENOD40 cDNA clones representing genes expressed during both early and late stages of nodule development. Plant Mol Biol 26: 487-493 (1994).
21. Miao G-H, Verma DPS: Soybean nodulin-26 gene encoding a channel protein is expressed only in the infected cells of nodules and is regulated differently in roots of homologous and heterologous plants. Plant Cell 5: 781-794 (1993).
22. Mylona P, Pawlowski K, Bisseling T: Symbiotic nitrogen fixation. Plant Cell 7: 869-885 (1995).
23. Nap J-P, Bisseling T: Developmental biology of a plant-prokaryote symbiosis: the legume root nodule. Science 250: 948-954 (1990).
24. Nishihama R, Banno H, Kawahara E, Irie K, Machida Y: Possible involvement of differential splicing in regulation of the activity of Arabidopsis ANP1 that is related to mitogen-activated protein kinase kinases (MAPKKKs). Plant J 12: 39-48 (1997).
25. 2 Metabolism, pp. 193-202. Elsevier, Amsterdam (1985).
26. Rogers SO, Bendich AJ: Extraction of DNA from plant tissues. In: Gelvin SB, Schilperoort RA (eds) Plant Molecular Biology Manual, pp. A6/1-A6/10. Kluwer Academic Publishers, Dordrecht, Netherlands (1988).
27. Rost B, Casadio R, Fariselli P, Sander C: Prediction of helical transmembrane segments at 95% accuracy. Protein Sci 4: 521-533 (1995).
28. Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).
29. Sandal NN, Marcker KA: Similarities between a soybean nodulin, Neurospora crassa sulphate permease II and a putative human tumor suppressor. Trends Biol Sci 19: 19 (1994).
30. Schultze M, Kondorosi E, Ratet P, Buire M, Kondorosi A: Cell and molecular biology of Rhizobium-plant interaction. Int Rev Cytol 156: 1-75 (1994).
31. Shi E, Kan M, Xu J, Wang F, Hou J, McKeehan WL: Control of fibroblast growth factor receptor kinase signal transduction by heterodimerization of combinatorial splice variants. Mol Cell Biol 13: 3907-3918 (1993).
32. Simpson GG, Filipowicz W: Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organisation of the spliceosomal machinary. Plant Mol Biol 32: 1-41 (1996).
33. Song W, Steiner HY, Zhang L, Naider F, Stacey G, Becker J: Cloning of a second Arabidopsis peptide transport gene. Plant Physiol: 110: 171-178 (1996).
34. Spaink HP: Regulation of plant morphogenesis by lipo-chitin oligonucleotides. Crit Rev Plant Sci 15: 559-582 (1996).
35. Sprent JI: Which steps are essential for the formation of functional legume nodules? New Phytol 111: 129-153 (1989).
36. Steiner HY, Song W, Zhang L, Naider F, Becker JM, Stacey G: An Arabidopsis transporter is a member of a novel family of membrane transport proteins. Plant Cell 6: 1289-1299 (1994).
37. Szczyglowski K, Hamburger D, Kapranov P, de Bruijn FJ: Construction of a Lotus japonicus late nodulin EST library and identification of novel nodule-specific genes. Plant Physiol 144: 1335-1346 (1997).
38. Trinchant J-C, Guerin V, Rigaud J: Acetylene reduction by symbiosomes and free bacteroids from broad bean (Vicia faba L.) nodules. Plant Physiol 105: 555-561 (1994).
39. Udvardi MK, Day DA: Metabolite transport across symbiotic membranes of legume nodules. Annu Rev Plant Physiol Plant Mol Biol 48: 493-523 (1997).
40. 2 fixation: limitation or exqusitive adaptation. Annu Rev Plant Physiol Plant Mol Biol 42: 373-392 (1991).
41. Verma DPS: Signals in root nodule organogenesis and endocytosis of Rhizobium. Plant Cell 4: 373-382 (1992).
42. Weaver CD, Shomer NH, Louis CF, Roberts DM: Nodulin 26, a nodule-specific symbiosome membrane protein from soybean, is an ion channel. J Biol Chem 269: 17858-17862 (1994).