Flowering plant self-incompatibility: The molecular population genetics of Brassica S-loci

Heredity

Volumn 81, Issue 1, 1998, Pages 1-9

  Charlesworth, D ^a   Awadalla, Philip ^a  

^a UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

B. oleracea; Brassica campestris; Self incompatibility

Indexed keywords

FLOWERING; GENE LOCUS; GENETIC COMPATIBILITY; GENETIC POLYMORPHISM; POPULATION GENETICS;

BRASSICA; BRASSICA CAMPESTRIS; BRASSICA OLERACEA;

EID: 0032127777     PISSN: 0018067X     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.hdy.6884000     Document Type: Short Survey

References (61)

1. ANDERSON, M. A., MCFADDEN, G. I., BERNATZKY, R., ATKINSON, A., ORPIN, T., DEDMAN, H., TREGEAR, G., FERNLEY, R. AND CLARKE, A. E. 1989. Sequence variability of three alleles of the self-incompatibility gene of Nicotiana alata. Pl. Cell, 1, 483-491.
2. BEACH, J. H. AND KRESS, W. J. 1980. Sporophytic vs. gametophytic: a note on the origin of self-incompatibility in the flowering plants. Syst. Bot., 5, 1-5.
3. BOYES, D. C., NASRALLAH, M. E., VREBALOV, J. AND NASRALLAH, J. B. 1997. The self-incompatibility (S) haplotypes of Brassica contain highly divergent and rearranged sequences of ancient origin. Pl. Cell, 9, 237-247.
4. BRACE, J., OCKENDON, D. J. AND KING, G. J. 1993. Development of a method for the identification of S alleles in Brassica oleracea based on digestion of PCR amplified DNA with restriction endonucleases. Sex. Pl. Repr., 6, 133-138.
5. CHARLESWORTH, D., LIU, F.-L. AND ZHANG, L. 1998. The evolution of the alcohol dehydrogenase gene family in plants of the genus Leavenworthia (Brassicaceae): loss of introns, and an intronless gene. Mol. Biol. Evol., in press.
6. COLEMAN, C. A. AND KAO, T.-H. 1992. The flanking regions of Petunia inflata S alleles are heterogeneous and contain repetitive sequences. Pl. Molec. Biol., 18, 725-737.
7. DWYER, K. G., BALENT, M. A., NASRALLAH, J. B. AND NASRALLAH, M. E. 1991. DNA sequences of self-incompatibility genes from Brassica campestris and B. oleracea: polymorphism predating speciation. Pl. Molec. Biol., 16, 481-486.
8. DWYER, K. G., KANDASAMY, M. K., MAHOSKY, D. I., AXXIAI, J., KUDISH, B. I., MILLER, J. E., NASRALLAH, M. E. AND NASRALLAH, J. B. 1994. A superfamily of S locus-related sequences in Arabidopsis: diverse structures and expression patterns. Plant Cell, 6, 1829-1843.
9. ERNST, A. 1936. Weitere untersuchungen zur phänanalyse zum fertilitätsproblem und zur genetik heterostyler primeln. II. Primula hortensis. Arch. Julius-Klaus Stift. Vererbungsforsch., Sozial-Anthropol. Rassenhygiene., 11, 1-280.
10. GLAVIN, T. L., GORING, D. R., SCHAFER, U. AND ROTHSTEIN, S. J. 1994. Features of the extracellular domain of the S-locus receptor kinase from Brassica. Mol. Gen. Genet., 244, 630-637.
11. GOODWILLIE, C. 1997. The genetic control, of self-incompatibility in Linanthus parviflorus (Polemoniaceae). Heredity, 79, 424-432.
12. GORING, D. F. AND ROTHSTEIN, S. J. 1996. S-locus receptor kinase genes and self-incompatibility in Brassica napus ssp. oleifera. In: D. P. S. Verma (ed.) Signal Transduction in Plant Growth and Development, pp. 217-230. Springer, New York.
13. GUSTAFSSON, K. AND ANDERSSON, L. 1994. Structure and evolution of horse MHC class II DRB genes: convergent evolution in the antigen-binding site. Immunogenetics, 39, 355-358.
14. HENRY, A.-M. AND DAMERVAL, C. 1997. High rates of polymorphism and recombination at the Opaque-2 locus in maize. Mol. Gen. Genet., 256, 147-157.
15. HINATA, K., WATANABE, M., YAMAKAWA, S., SATTA, Y. AND ISOGAI, A. 1995. Evolutionary aspects of the S-related genes of the Brassica self-incompatibility system: synonymous and nonsynonymous base substitutions. Genetics, 140, 1099-1104.
16. HOLSINGER, K. E. AND STEINBACHS, J. E. 1997. Mating systems and evolution in flowering plants. In: K. Iwatsuki and P. Raven (eds) Evolution and Diversification of Land Plants, pp. 223-248. Springer, Tokyo.
17. HUDSON, R. R. 1990. Gene genealogies and the coalescent process. Oxf. Surv. Evol. Biol., 7, 1-45.
18. HUGHES, A. AND NEI, M. 1989. Nucleotide substitution at major histocompatibility complex class II loci: evidence for over-dominant selection. Proc. Natl. Acad. Sci. U.S.A., 86, 958-962.
19. HUGHES, A., OTA, T. AND NEI, M. 1990. Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex molecules. Mol. Bio. Evol., 76, 515-524.
20. IOERGER, T. R., CLARK, A. G. AND KAO, T.-H. 1990. Polymorphism at the self-incompatibility locus in Solanaceae predates speciation. Proc. Natl. Acad. Sci. U.S.A., 87, 9732-9735.
21. JANSSENS, G. A., GODERIS, I. J., BROEKAERT, W. F. AND BROOTHAERTS, W. 1995. A molecular method for S-allele identification in apple based on allele-specific PCR. Theor. Appl. Genet., 91, 691-698.
22. JORGENSEN, R. 1990. Altered gene expression in plants due to trans interactions between homologous genes. Trends Biotechnol., 8, 340-344.
23. KAO, T.-H. AND MCCUBBIN, A. G. 1996. How flowering plants discriminate between self and non-self pollen to prevent inbreeding. Proc. Natl. Acad. Sci. U.S.A., 93, 12059-12065.
24. KOWYAMA, Y., SHIMANO, N. AND KAWASI, T. 1980. Genetic analysis of incompatibility in the diploid species Ipomoea closely related to the sweet potato. Theor. Appl. Genet., 58, 149-155.
25. KUMAR, S., TAMURA, K. AND NEI, M. 1994. MEGA - molecular evolutionary genetics analysis software for microcomputers. Comput. Appl. Biosci., 10, 189-191.
26. KUSABA, M., NISHIO, T., SATTA, Y., HINATA, K. AND OCKENDON, D. 1997. Striking similarity in inter-and intra-specific comparisons of class I SLG alleles from Brassica oleracea and Brassica campestris: Implications for the evolution and recognition mechanism. Proc. Nat. Acad. Sci. U.S.A., 94, 7673-7678.
27. LEWIS, D. 1963. A protein dimer hypothesis on incompatibility. In: S. J. Geerts (ed.) Genetics Today, pp. 656-663. Pergamon Press, Oxford.
28. LI, X., NIELD, J., HAYMAN, D. AND LANGRIDGE, P. 1995. Thioredoxin activity in the C terminus of Phalaris S protein. Plant J., 8, 133-138.
29. LIU, F., ZHANG, L. AND CHARLESWORTH, D. 1998. Genetic diversity in Leavenworthia populations with different inbreeding levels. Proc. R. Soc. B., 265, 293-301.
30. MATTON, D. P., MAES, O., LAUBLIN, G., XIKE, Q., BERTRAND, C., MORSE, D. AND CAPPADOCIA, M. 1997. Hypervariable domains of self-incompatibility RNases mediate allele-specific pollen recognition. Pl. Cell, 9, 1757-1766.
31. MAY, G. AND MATZKE, E. 1995. Recombination and variation at the a mating-type of coprinus-cinereus. Mol. Biol. Evol., 12, 794-802.
32. MIYASHITA, N. T., AGUADE, M. AND LANGLEY, C. H. 1993. Linkage disequilibrium in the white locus region of Drosophila melanogaster. Genet. Res., 62, 101-109.
33. MORIYAMA, E. N. AND POWELL, J. R. 1995. Intraspecific nuclear DNA variation in Drosophila. Mol. Biol. Evol., 13, 261-277.
34. NASRALLAH, M. E., KANDASAMY, M. K. AND NASRALLAH, J. B. 1992. A genetically defined trans-acting locus regulates 5-locus function in Brassica. Plant J., 2, 497-506.
35. NASRALLAH, J. B., KAO, T.-H., CHEN, C.-H., GOLDBERG, M. AND NASRALLAH, M. E. 1987. Amino-acid sequence of glycoproteins encoded by three alleles of the S locus of Brassica oleracea. Nature, 326, 617-619.
36. NASRALLAH, J. B., NISHIO, T. AND NASRALLAH, M. E. 1991. The Self-incompatibility genes of Brassica: expression and use in genetic ablation of floral tissues. Ann. Rev. Plant Physiol. Plant Mol. Biol., 42, 393-422.
37. NEI, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York.
38. NISHIO, T., KUSABA, M., SAKAMOTO, K. AND OCKENDON, D. 1997. Polymorphism of the kinase domain of the S-locus receptor kinase gene (SRK) in Brassica oleracea L. Theor. Appl. Genet., 95, 335-342.
39. NOU, I. S., WATANABE, M., ISOGAI, A. AND HINATA, K. 1993. Comparison of S-alleles and S-glycoproteins between two populations of Brassica campestris in Turkey and Japan. Sex. Pl. Repr., 6, 79-86.
40. O'HUIGIN, C. 1995. Quantifying the degree of convergence in primate Mhc-DRB genes. Immunol. Rev., 143, 123-140.
41. O'DONNELL, S., LANE, M. D. AND LAWRENCE, M. J. 1993. The population genetics of the self-incompatibility polymorphism in Papaver rhoeas. VI. Estimation of the overlap between the allelic complements of a pair of populations. Heredity, 71, 591-595.
42. PASTUGLIA, M., ROBY, D., DUMAS, C. AND COCK, J. M. 1997a. Rapid induction by wounding and bacterial infection of an Sgene family receptor-like kinase gene in Brassica oleracea. Pl. Cell, 9, 49-60.
43. PASTUGLIA, M., RUFFIO-CHÂBLE, V., DELORME, V., GAUDE, T., DUMAS, C. AND COCK, J. M. 1997b. A functional S locus anther gene is not required for the self-incompatibility response in Brassica oleracea. Pl. Cell, 9, 2065-2076.
44. RICHMAN, A. D., UYENOYAMA, M. K. AND KOHN, J. R. 1996. Allelic diversity and gene genealogy at the self-incompatibility locus in the Solanaceae. Science, 273, 1212-1216.
45. RUDD, J. J., FRANKLIN, F. C. H., LORD, J. M. AND FRANKLIN-TONG, V. E. 1996. Increased phosphorylation of a 26-kD pollen protein is induced by the self-incompatibility response in Papaver rhoeas. Pl. Cell, 8, 713-724.
46. SAMPSON, D. R. 1967. Frequency and distribution of self-incompatibility alleles in Raphanus raphanistrum. Genetics, 56, 241-251.
47. SANMIGUEL, P., TIKHONOV, A., JIN, Y. K., MOTCHOULSKAIA, N., ZAKHAROV, D., MELAKEBERHAN, A. ET AL. 1997. Nested retrotransposons in the intergenic regions of the maize genome. Science, 274, 765-768.
48. SASSA, H., HIRANO, H. AND KOBA, T. 1997. Style-specific self-compatible mutation caused by deletion of the S-RNase gene in Japanese pear (Pyrus serotina). Plant J., 12, 223-227.
49. 2/S ribonuclease superfamily. Mol. Gen. Genet., 250, 547-557.
50. STEIN, J., HOWLETT, B., BOYES, D. C., NASRALLAH, M. E. AND NASRALLAH, J. B. 1991. Molecular cloning of a putative receptor protein kinase gene encoded at the self-incompatibility locus of Brassica oleracea. Proc. Natl. Acad. Sci. U.S.A., 88, 8816-8820.
51. STEPHENSON, A. G., DOUGHTY, J., DIXON, S., ELLRMAN, C., HISCOCK, S. AND DICKINSON, H. G. 1997. The male determinant of self-incompatibility in Brassica is located in the pollen coating. Plant J., 12, 1351-1359.
52. SUZUKI, G., WATANABE, M., KAI, N., MATSUDA, N., TORIYAMA, K., TAKAYAMA, S., ISIGAI, A. AND HINATA, K. 1997. Three members of the S multigene family are linked to the locus of Brassica. Mol Gen. Genet., 256, 257-264.
53. TANAKA, T. AND NEI, M. 1989. Positive Darwinian selection observed at the variable region genes of immunoglobulins. Mol. Biol. Evol., 6, 447-459.
54. UYENOYAMA, M. K. 1997. Genealogical structure among alleles regulating self-incompatibility in natural populations of flowering plants of self-incompatibility. Genetics, 147, 1389-1400.
55. VEKEMANS, X. AND SLATKIN, M. 1994. Gene and allelic genealogies at a gametophytic self-incompatibility locus. Genetics, 137, 1157-1165.
56. WALKER, E. A., RIDE, J. P., KURUP, S., FRANKLIN-TONG, V. E., LAWRENCE, M. J. AND FRANKLIN, F. C. H. 1996. Molecular analysis of two functional homologues of the S3 allele of the Papaver rhoeas self-incompatibility gene isolated from different populations. Plant Mol. Biol., 30, 983-994.
57. WELLER, S. G., DONOGHUE, M. J. AND CHARLESWORTH, D. 1995. The evolution of self-incompatibility in the flowering plants: a phylogenetic approach. In: P. C. Hoch and A. G. Stephenson (eds) Experimental and Molecular Approaches to Plant Biosystematics, pp. 355-382. Missouri Botanic Garden, St. Louis, MO.
58. WHITEHOUSE, H. L. K. 1950. Multiple-allelomorph incompatibility of pollen and style in the evolution of the angiosperms. Ann. Bot., 14, 198-216.
59. WOLFE, K. H. L. I. W.-H. AND SHARP, P. M. 1989. Rates of synonymous substitution in plant nuclear genes. J. Mol. Evol., 28, 208-211.
60. WRIGHT, S. 1939. The distribution of self-sterility alleles in populations. Genetics, 24, 538-552.
61. YU, K., GLAVIN, T. L., GORING, D. F. AND ROTHSTEIN, S. J. 1996. Molecular characterization of the S locus in two self-incompatible Brassica napus lines. Pl. Cell, 8, 2369-2380.