Molecular Phytogeny of the Nuclear 5.8S Ribosomal RNA Genes in 37 Species of Nicotiana Genus

Genetika

Volumn 34, Issue 7, 1998, Pages 883-889

  Komarnitsky, S I ^a,b   Komarnitsky, I K ^a,b   Cox, A ^a,b   Parokonny, A S ^a,b  

^a INSTITUTE OF CELL BIOLOGY AND GENETIC ENGINEERING   (Ukraine)

^b JODRELL LABORATORY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 5.8S;

ARTICLE; CELL NUCLEUS; GENE; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE; TOBACCO;

BASE SEQUENCE; CELL NUCLEUS; GENES, PLANT; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANTS, TOXIC; RNA, RIBOSOMAL, 5.8S; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPECIES SPECIFICITY; TOBACCO;

EID: 0032111820     PISSN: 00166758     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (38)

1. Goodspeed T.H. The genus Nicotiana. Massachusetts: Waltham, 1954.536p.
2. D'Arcy W.G. The Solanaceae since 1976, with a review of its biogeography // Solanaceae. III. Taxonomy, Chemistry, Evolution / Eds Hawkes J.G., Lester R.N., Nee M., Estrada N. L.: Royal Bot. Gardens, Kew and Linnean Soc. London, 1991. P. 75-137.
3. Kostoff D. Cytogenetics of the genus Nicotiana. Sofia: State Printed House, 1941t3. 1071 p.
4. Wildman S.G. Polypeptide composition of rubisco as an aid in studies of plant phylogeny // Proteins and nucleic acids in plant systematics / Eds Jensen U., Fairbrothers D.E. Berlin: Springer-Verlag, 1983. P. 182-190.
5. Burbidge N.T. The australian species of Nicotiana L. (Solanaceae) //Aust. J. Bot. 1960. V. 8. P. 342-395.
6. Merxmuller J., Buttler K.P. Nicotiana in Africanischen Namiberi Pflan/engeographischen and Phylogenetischen Rätsel // Mitt. Bot. München. 1975. B. 12. S. 91104.
7. Long E.O., Dawid I.B. Repeated genes in eukaryotes // Annu. Rev. Biochem. 1980. V. 43. P. 727-764.
8. Veukateswarlu K., Nazar R. A conserved core structure in the 18-25S rRNA intergenic region from tobacco, Nicotiana rustica II Plant. Mol. Biol. 1991. V. 17. P. 189-194.
9. Kiss T., Kiss M., Abel S., Solymasy F. Nucleotide sequence of the 775-255 spacer region from tomato rDNA//Nucl. Acids Res. 1988. V. 16. P. 7179.
10. D'Ovldio R. Nucleotide sequence of a 5.8S rDNA gene and of the internal transcribed spacers from Populus deltoides // Plant. Mol. Biol. 1992. V. 19. N° 6. P. 10691072.
11. Takaiwa F., Oono K., Sugiura M. Nucleotide sequence of the 77-255 spacer region from rice rDNA // Plant. Mol. Biol. 1985. V. 4. P. 355-364.
12. Rathgeber J., Capesius I. Nucleotide sequence of the 18-25S spacer region from mustard rDNA // Nucl. Acids Res. 1989. V. 17. P. 7522.
13. Baldwin B.C. Molecular phylogenetics of Calicadenia (Compositae) based on ITS sequences of nuclear ribosomal DNA: chromosomal and morphological evolution reexamined // Am. J. Bot. 1993. V. 80. P. 222-238.
14. SunY.,SkinnerD.Z.,LiangG.H.,HulbertS.H. Phylogenetic analysis of Sorgum and related taxa using internal transcribed spacers of nuclear ribosimal DNA // Theor. Appl. Genet. 1994. V. 89. P. 26-32.
15. Hsiao C., Chatterton N.J., Asay K.H., Jensen K.B. Molecular phylogeny of the Pooideae (Poaceae) based on nuclear rDNA (ITS) sequences // Theor. Appl. Genet. 1995. V. 90. P. 389-398.
16. Baldwin B.C. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae // Mol. Phyl. Evol. 1992. V. l.-Nal.P. 3-16.
17. Arnheim N., Krystal M., Schmichel R. et al. Molecular evidence for genetic exchanges among ribosomal genes on non-homologous chromosomes in man and apes // Proc. Natl Acad. Sei. USA. 1980. V. 77. P. 7323-7327.
18. Murashige T., Skoog F. A revised medium for rapid growth and bioassays with tobacco tissue cultures // Physiol. Plant. 1962. V. 15. P. 47397.
19. Murray M.G., Thompson W.F. Rapid isolation of high molecular weight plant DNA // Nucl. Acids Res. 1980. V. 8. P. 4321-4325.
20. White T.J., Bruns T., Lee S., Taylor.J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics // PCR protocols: a guide to methods and applications / Eds Innis M., Gelfand D.H., Sninsky J.J., White T.G. San Diego: Acad. Press, 1990. P. 315-322.
21. Higgins D.G., GleasbyAJ., Fuchs R. CLUSTAL V: improved software for multiple sequence alignment // CABIOS. 1992. V. 8. P. 189-191.
22. Felsenstein J. PHYLIP - Phylogeny Inference Package (Version 3.2) //Cladistics. 1989. V. P 164-166.
23. Bessis J., Guyot M. An attempt to use stomatal characters in systematic and phylogenetic studies of the Solanaceae // The biology and taxonomy of the Solanaceae / Eds Hawkes J.G., Lester R.N., Shelding A.D. L.: Acad. Press, 1979. P. 321-326.
24. Felsenstein J. Confidence limits on phylogenies: An approach using bootstrap//Evolution. 1985. V. 39. P. 783791.
25. Sander son M.J. Confidence limits on phylogenies: The bootstrap revisited // Cladistics. 1989. V. 5. P. 113-129.
26. Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees // Mol. Biol. Evol. 1987. V. 4. P. 406-425.
27. Kluge A.G., Farris J.S. Quantitative phyletics and the evolution of anurans // System. Zool. 1969. V. 18. P. 1-
28. Nei M. Molecular evolutionary genetics. N.Y.: Columbia Univ. Press, 1987.512p.
29. Kawashima N., Tanabe Y. Comparison of the primary structure of the large and small subunits of the Fraction I protein from Solanaceae plants and other families // Biochem Syst. Ecol. 1975. V. 2. P. 193-199.
30. Rhodes P.R., Zhu Y.S., Kung S.D. Nicotiana chloroplast genome. 1. Chloroplast DNA diversity // Mol. Gen. Genet. 1981. V. 182.JVsl.P. 106-111.
31. Narajan R.K.L. Nuclear DNA changes, genome differentiation and evolution in Nicotiana II Plant Syst. Evol. 1987. V. 157. P. 161-180.