Use of short tandem repeats for the analysis of genetic variability in sympatric populations of Anopheles gambiae and Anopheles arabiensis

Heredity

Volumn 80, Issue 6, 1998, Pages 675-682

  Kamau, Luna ^a,b   Hawley, William A ^a,c   Lehmann, Tovi ^c   Orago, Alloys S S ^b   Cornel, Anthony ^c   Ke, Zhaoxi ^c   Collins, Frank H ^c  

^a KENYA MEDICAL RESEARCH INSTITUTE   (Kenya)

^b KENYATTA UNIVERSITY   (Kenya)

^c CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

Author keywords

Anopheles gambiae; Genetic variability; Microsatellites; Paracentric inversions; Sympatric species

Indexed keywords

GENETIC ANALYSIS; GENETIC DISTANCE; KENYA; POLYMORPHISM; TANDEM REPEAT;

ANOPHELES ARABIENSIS; ANOPHELES GAMBIAE; INSECTA;

EID: 0032104373     PISSN: 0018067X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2540.1998.00327.x     Document Type: Article

References (34)

1. BECKMAN, J. S. AND WEBER, J. L. 1992. Survey of human and rat microsatellites. Genomics, 12, 627-631.
2. BESANSKY, N. J., POWELL, J. R., CACCONE, A., HAMM, D. M., SCOTT, J. A. AND COLLINS, F. H. 1994. Molecular phylogeny of the Anopheles gambiae complex suggests genetic introgression between the principal malaria vectors. Proc. Natl. Acad. Sci. U.S.A., 91, 6885-6888.
3. BOWCOCK, A. M., ROES-LINARES, A., TOMFOHRDE, J., MINCH, E., KIDD, J. R. AND CAVALLI-SFORZA, L. L. 1994. High resolution of human evolutionary trees with polymorphic microsatellites. Nature, 368, 455-457.
4. BRUSSARD, P. F., EHRLICH, P. R., MURPHY, D. D., WILCOX, B. A. AND WRIGHT, J. 1985. Genetic distances and the taxonomy of checkerspot butterflies (Nymphalidae: Nymphalinae). J. Kans. Entomol. Soc., 58, 403-412.
5. BUDOWLE, B. AND ALLEN, R. C. 1991. Discontinuous polyacrylamide gel electrophoresis of DNA fragments. In: Mathew, C. (ed.) Methods in Molecular Biology: Protocols in Human Molecular Genetics, Vol. 9, pp. 123-132. The Humana Press, Clifton, NJ.
6. CAIRNS, M. J. AND MURRAY, V. 1994. Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. Biotechniques, 17, 915-919.
7. CHAKRABORTY, R., DE ANDRADE, M., DIAGER, S. P. AND BUDOWLE, B. 1992. Apparent heterozygote deficiencies observed in DNA typing data and their implication in forensic applications. Ann. Hum. Genet., 56, 45-57.
8. CIANCHI, R., URBANELLI, S., VILLANI, F., SABATINI, A. AND BULLINI, L. 1983. Electrophoretic studies in mosquitoes: recent advances. Parasitologia, 27, 157-167.
9. COLLINS, F. H., MENDEZ, M. A., RASMUSSEN, M. O., MEHAFFEY, P. C., BESANSKY, N. J. AND FINNERTY, V. 1987. A ribosomal RNA gene probe differentiates member species of the Anopheles gambiae complex. Am. J. Trop. Med. Hyg., 37, 37-41.
10. COLLINS, F. H., MEHAFFEY, P. C., RASMUSSEN, M. O., BRANDLING-BENNET, A. D., ODERA, J. S. AND FINNERTY, V. 1988. Comparison of DNA-probe and isozyme methods for differentiating Anopheles gambiae and Anopheles arabiensis (Diptera: Culicidae). J. Med. Entomol., 25, 116-120.
11. COLUZZI, M., SABATINI, A., PETRARCA, V. AND DI DECO, M. A. 1979. Chromosomal differentiation and adaptation to human environments in the Anopheles gambiae complex. Trans. R. Soc. Trop. Med. Hyg., 73, 483-497.
12. COLUZZI, M., PETRARCA, V. AND DI DECO, M. 1985. Chromosomal inversion intergradation and incipient speciation in Anopheles gambiae. Boll. Zool., 52, 45-63.
13. DAVIDSON, G., PATERSON, H. E., COLUZZI, M., MASON, G. F. AND MICKS, D. W. 1967. The Anopheles gambiae complex. In: Wright, J. W. and Pal, R. (eds) Genetics of Insect Vectors of Disease, pp. 211-301. Elsevier, Amsterdam.
14. n repeats in chimpanzees. Genomics, 22, 226-230.
15. ESTOUP, A., GARNERY, L., SOLIGNAC, M. AND CORNUET, J. 1995. Microsatellite variation in honey bee (Apis mellifera L.) populations: hierarchical genetic structure and test of the infinite allele and stepwise mutation models. Genetics, 140, 679-695.
16. GILLESPIE, J. H. 1991. The Causes of Molecular Evolution. Oxford University Press, New York.
17. HOLMS, S. 1979. A simple sequential rejection multiple test procedure. Scand. J. Stat., 6, 65-70.
18. IRWIN, D. M., KOCHER, T. D. AND WILSON, A. C. 1991. Evolution of the cytochrome b gene of mammals. J. Mol. Evol., 32, 128-144.
19. LANZARO, G. C., TOURE, Y. T., ZHENG, L., KAFATOS, F. C. AND VERNICK, K. D. 1995. Microsatellite DNA and isozyme variability in a West African population of Anopheles gambiae. Insect Mol. Biol., 4, 105-112.
20. LEHMANN, T., HAWLEY, W. A., KAMAU, L., FONTENILLE, D., SIMARD, F. AND COLLINS, F. H. 1996. Genetic differentiation of Anopheles gambiae populations from east and west Africa: comparison of microsatellite and allozyme loci. Heredity, 77, 192-200.
21. MILES, S. J. 1978. Enzyme variation in the Anopheles gambiae Giles group of species (Diptera: Culicidae). Bull. Ent. Res., 68, 85-96.
22. MOSHA, F. W. AND PETRARCA, V. 1983. Ecological studies on Anopheles gambiae complex sibling species on the Kenya coast. Trans. R. Soc. Trop. Med. Hyg., 77, 344-345.
23. NEI, M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89, 583-590.
24. PETRARCA, V. AND BEIER, J. C. 1992. Intraspecific polymorphism in the Anopheles gambiae complex as a factor affecting malaria transmission in the Kisumu area of Kenya. Am. J. Trop. Med. Hyg., 46, 229-237.
25. RAYMOND, M. AND ROUSSET, F. 1995. An exact test for population differentiation. Evolution, 49, 1280-1283.
26. SCOTT, J. A., BROGDON, W. G. AND COLLINS, F. H. 1993. Identification of a single specimen of the Anopheles gambiae complex by the polymerase chain reaction. Am. J. Trop. Med. Hyg., 49, 520-529.
27. SLATKIN, M. 1987. Gene flow and the geographical structure of natural populations. Science, 236, 787-792.
28. SLATKIN, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics, 139, 457-462.
29. n repetitive sequences in mammalian genomes. Genomics, 10, 807-815.
30. WEBER, J. L., KWITEK, A. E., MAY, P. E. AND KILLARY, A. M. 1990. Dinucleotide repeat polymorphism at the, D4s, 174-locus. Nucleic Acids Res., 18, 4636-4638.
31. WHITE, G. B. 1971. Chromosomal evidence for natural interspecific hybridization by mosquitoes of the Anopheles gambiae complex. Nature, 231, 184-185.
32. WEIR, B. S. AND COCKERHAM, C. C. 1984. Estimating F-statistics for analysis of population structure. Evolution, 38, 1358-1370.
33. WRIGHT, S. 1969. Evolution and the Genetics of Populations: Vol. 2, The Theory of Gene Frequencies. University of Chicago Press, Chicago.
34. ZHENG, L., BENEDICT, M. Q., CORNEL, A. J., COLLINS, F. H. AND KAFATOS, F. C. 1996. An integrated genetic map of the African human malaria vector mosquito. Anopheles gambiae. Genetics, 143, 941-952.