Nε-,Nε-dimethyl-lysine cytochrome c as an NMR probe for lysine involvement in protein-protein complex formation

Biochemical Journal

Volumn 332, Issue 2, 1998, Pages 439-449

  Moore, Geoffrey R ^a   Cox, Mark C ^a   Crowe, David ^a   Osborne, Michael J ^a   Rosell, Federico I ^b   Bujons, Jordi ^b   Barker, Paul D ^b   Mauk, Marcia R ^b   Mauk, A Grant ^b  

^a UNIVERSITY OF EAST ANGLIA   (United Kingdom)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CYC1 PROTEIN, S CEREVISIAE; CYTOCHROME B5; CYTOCHROME C; CYTOCHROME C PEROXIDASE; DIMETHYLLYSINE; DRUG DERIVATIVE; EPSILON N-DIMETHYLLYSINE; FUNGAL PROTEIN; LYSINE; SACCHAROMYCES CEREVISIAE PROTEIN; LIVER ENZYME;

ANIMAL; ARTICLE; CATTLE; CHEMISTRY; ELECTRON TRANSPORT; HORSE; KINETICS; LIVER; METABOLISM; MOLECULAR PROBE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; OXIDATION REDUCTION REACTION; PH; PHYSIOLOGY; PROTEIN BINDING; CARBON NUCLEAR MAGNETIC RESONANCE; COMPLEX FORMATION; METHYLATION; NONHUMAN; OXIDATION; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; PROTON NUCLEAR MAGNETIC RESONANCE; STRUCTURE ACTIVITY RELATION; TECHNIQUE; TEMPERATURE DEPENDENCE; YEAST;

ANIMALS; CATTLE; CYTOCHROME C GROUP; CYTOCHROME-C PEROXIDASE; CYTOCHROMES B5; CYTOCHROMES C; ELECTRON TRANSPORT; FUNGAL PROTEINS; HORSES; HYDROGEN-ION CONCENTRATION; KINETICS; LIVER; LYSINE; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR PROBES; OXIDATION-REDUCTION; PROTEIN BINDING; SACCHAROMYCES CEREVISIAE PROTEINS;

EID: 0032102388     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/bj3320439     Document Type: Article

References (90)

1. Salemme, F. R. (1976) J. Mol. Biol. 102, 563-568
2. Mauk, A. G., Mauk, M. R., Moore, G. R. and Northrup, S. H. (1995) J. Bioenerg. Biomemb. 27, 311-330
3. Poulos, T. L. and Kraut, J. (1980) J. Biol. Chem. 255,10322-10330
4. Lum, V. R., Brayer, G. D., Louie, G. V., Smith, M. and Mauk, A. G. (1988) in Protein Structure, Folding, and Design (Oxender, D. L., ed.), pp. 143-150, Alan R. Liss, New York
5. Northrup, S. H., Boles, J. O. and Reynolds, J. C. (1988) Science 241, 67-70
6. Northrup, S. H., Luton, J. A., Boles, J. O. and Reynolds, J. C. (1988) J. Comp. Mol. Des. 1, 291-311
7. Northrup, S. H. and Herbert, R. G. (1990) Int. J. Quant. Chem. 55-71
8. Kang, C. H., Brautigan, D. L., Osheroff, N. and Margoliash, E. (1978) J. Biol. Chem. 253, 6502-6510
9. Bechtold, R. and Bosshard, H. R. (1985) J. Biol. Chem. 260, 5191-5200
10. Corin, A. F., McLendon, G., Zhang, Q., Hake, R. A., Falvo, J., Lu, K. S., Ciccarelli, R. B. and Holzschu, D. (1991) Biochemistry 30, 11585-11595
11. Corin, A. F., Hake, R. A., McLendon, G., Hazzard, J. T. and Tollin, G. (1993) Biochemistry 32, 2755-2762
12. Millett, F., Miller, M. A., Geren, L. and Durham, B. (1995) J. Bioenerg. Biomembr. 27, 341-351
13. Pelletier, H. and Kraut, J. (1992) Science 258, 1748-1755
14. Nocek, J. M., Zhou, J. S., Deforest, S., Priyadarshy, S., Beratan, D. N., Onuchic, J. N. and Huffman, B. M. (1996) Chem. Rev. 96, 2459-2489
15. Gupta, R. K. and Yonetani, T. (1973) Biochim. Biophys. Acta 292, 502-508
16. Miura, R., Sugiyama, T., Akasaka, K. and Yamano, T. (1980) Biochem. Int. 1, 532-538
17. Boswell, A. P., McClune, G. J., Moore, G. R., Williams, R. J., Pettigrew, G. W., Inubishi, T., Yonetani, T. and Harris, D. E. (1980) Biochem. Soc. Trans. 8, 637-638
18. Eley, C. G. and Moore, G. R. (1983) Biochem. J. 215,11-21
19. McLachlan, S. J., La Mar, G. N. and Sletten, E. (1986) J. Am. Chem. Soc. 108, 1285-1291
20. Satterlee, J. D., Moench, S. J. and Erman, J. E. (1987) Biochim. Biophys. Acta 912, 87-97
21. Burch, A. M., Rigby, S. E., Funk, W. D., MacGillivray, R. T., Mauk, M. R., Mauk, A. G. and Moore, G. R. (1990) Science 247, 831-833
22. Whitford, D., Concar, D. W., Veitch, N. C. and Williams, R. J. (1990) Eur. J. Biochem. 192, 715-721
23. Moore, G. R., Cox, M. C., Crowe,-D., Osborne, M. J., Mauk, A. G. and Wilson, M. T. (1995) in NMR of Paramagnetic Systems (La Mar, G. N., ed.), pp. 95-122, NATO ASI C457, Kluwer, Dordrecht
24. Guiles, R. D., Sarma, S., DiGate, R. J., Banville, D., Basus, V. J., Kuntz, I. D. and Waskell, L. (1996) Nature Struct. Biol. 3, 333-339
25. Wang, J. L., Larsen, R. W., Moench, S. J., Satterlee, J. D., Rousseau, D. L. and Ondrias, M. R. (1996) Biochemistry 35, 453-163
26. Yi, Q., Erman, J. E. and Satterlee, J. D. (1994) Biochemistry 33, 12032-12041
27. Moench, S. J., Chroni, S., Lou, B. S., Erman, J. E. and Satterlee, J. D. (1992) Biochemistry 31, 3661-3670
28. Jeng, M. F., Englander, S. W., Pardue, K., Rogalskyj, J. S. and McLendon, G. (1994) Nature Struct Biol. 1, 234-238
29. Sukits, S. F., Erman, J. E. and Satterlee, J. D. (1997) Biochemistry 36, 5251-5259
30. Ubbink, M. and Bendall, D. S. (1997) Biochemistry 36, 6326-6335
31. Dick, L. R., Sherry, A. D., Newkirk, M. M. and Gray, D. M. (1988) J. Biol. Chem. 263, 18864-18872
32. Jentoft, J. E., Gerken, T. A., Jentoft, N. and Dearborn, D. G. (1981) J. Biol. Chem. 256, 231-236
33. Gerken, T. A., Jenton, J. E., Jentoft, N. and Dearborn, D. G. (1982) J. Biol. Chem. 257, 2894-2900
34. Gluck, M. and Sweeney, W. V. (1990) Biochim. Biophys. Acta 1038, 146-151
35. Zhang, M. and Vogel, H. J. (1993) J. Biol. Chem. 268, 22420-22428
36. Zhang, M., Thulin, E. and Vogel, H. J. (1994) J. Protein Chem. 13, 527-535
37. Goodin, D. B., Davidson, M. G., Roe, J. A., Mauk, A. G. and Smith, M. (1991) Biochemistry 30, 4953-4962
38. Ferrer, J. C., Turano, P., Banci, L., Bertini, I., Morris, I. K., Smith, K. M., Smith, M. and Mauk, A. G. (1994) Biochemistry 33, 7819-7829
39. Vitello, L. B., Huang, M. and Erman, J. E. (1990) Biochemistry 29, 4283-4288
40. Rafferty, S. P., Pearce, L. L., Barker, P. D., Guillemette, J. G., Kay, C. M., Smith, M. and Mauk, A. G. (1990) Biochemistry 29, 9365-9369
41. Cutler, R. L., Pielak, G. J., Mauk, A. G. and Smith, M. (1987) Protein Eng. 1, 95-99
42. Ferrer, J. C., Guillemette, J. G., Bogumil, R., Inglis, S. C., Smith, M. and Mauk, A. G. (1993) J. Am. Chem. Soc. 115, 7507-7508
43. Reference deleted
44. Funk, W. D., Lo, T. P., Mauk, M. R., Brayer, G. D., MacGillivray, R. T. and Mauk, A. G. (1990) Biochemistry 29, 5500-5508
45. Mauk, M. R., Barker, P. D. and Mauk, A. G. (1991) Biochemistry 30, 9873-9881
46. Ozols, J. and Strittmatter, P. (1964) J. Biol. Chem. 239, 1018-1023
47. Brautigan, D. L., Ferguson-Miller, S. and Margoliash, E. (1978) Methods Enzymol. 53, 128-164
48. Margoliash, E. and Frohwirt, N. (1959) Biochem. J. 71, 570-572
49. Jentoft, N. and Dearborn, D. G. (1983) Methods Enzymol. 91, 570-577.
50. Wallace, C. J. A. and Cortésy, B. E. (1987) Eur. J. Biochem. 170, 293-298
51. Ceilings, B. A. and Douglas, D. J. (1996) J. Am. Chem. Soc. 118, 4488-4489
52. Barker, P. D., Mauk, M. R. and Mauk, A. G. (1991) Biochemistry 30, 2377-2383
53. Laskowski, Jr., M. and Finkenstadt, W. R. (1972) Methods Enzymol 26C, 193-277
54. Eltis, L. D., Herbert, R. G., Barker, P. D., Mauk, A. G. and Northrup, S. H. (1991) Biochemistry 30, 3663-3674
55. Northrup, S. H., Thomasson, K. A., Miller, C. M., Barker, P. D., Eltis, L. D., Guillemette, J. G., Inglis, S. C. and Mauk, A. G. (1993) Biochemistry 32, 6613-6623
56. Keller, R. M. and Wuthrich, K. (1981) J. Mol. Biol. 183, 429-446
57. Feng, Y., Roder, H., Englander, S. W., Wand, A. J. and Di Stefano, D. L. (1989) Biochemistry 28,195-203
58. Maudsley, A. A., Muller, L. and Ernst, R. R. (1977) J. Magn. Reson. 28, 463-469
59. Forsén, S. and Huffman, R. A. (1963) J. Chem. Phys. 39, 2892-2901
60. Gupta, R. K., Koenig, S. H. and Redfield, A. G. (1972) J. Magn. Reson. 7, 66-73
61. Concar, D. W., Hill, H. A. O., Moore, G. R., Whitford, D. and Williams, R. J. (1986) FEBS Lett. 206, 15-19
62. Jeener, J., Meier, B. H., Bachmann, P. and Ernst, R. R. (1979) J. Chem. Phys. 71, 4546-4553
63. Boyd, J., Moore, G. R. and Williams, G. (1984) J. Magn. Reson. 58, 511-516
64. Cox, M. C. (1993) Ph.D. thesis, University of East Anglia
65. Boswell, A. P., Moore, G. R., Williams, R. J., Harris, D. E., Wallace, C. J., Bocieck, S. and Welti, D. (1983) Biochem. J. 213, 679-686
66. Falk, K. E., Jovall, P. A. and Angstrom, J. (1981) Biochem. J. 193, 1021-1024
67. Moore, G. R. and Williams, R. J. (1980) Eur. J. Biochem. 103, 493-502
68. Eley, C. G., Moore, G. R., Williams, R. J., Neupert, W., Boon, P. J., Brinkhof, H. H., Nivard, R. J. and Tesser, G. I. (1982) Biochem. J. 205, 153-165
69. Burns, P. D. and La Mar, G. N. (1981) J. Biol. Chem. 256, 4934-4939
70. van Leeuwen, J. W. (1983) Biochim. Biophys. Acta 743, 408-421
71. Durham, B., Fairris, J. L., McLean, M., Millett, F., Scott, J. R., Sugar, S. G. and Willie, A. (1995) J. Bioenerg. Biomembr. 27, 331-340
72. Hazzard, J. T., McLendon, G., Cusanovich, M. A. and Tollin, G. (1988) Biochem. Biophys. Res. Commun. 151, 429-434
73. Baxter, C. S. and Byvoet, P. (1975) Biochem. Biophys. Res. Commun. 64, 514-518
74. Huque, M. E. and Vogel, H. J. (1993) J. Protein Chem. 12, 695-707
75. Osheroff, N., Borden, D., Koppenol, W. H. and Margoliash, E. (1980) J. Biol. Chem. 255, 1689-1697
76. Moore, G. R., Eley, C. G. S. and Williams, G. (1983) Adv. Inorg. Bioinorg. Mech. 3, 1-96
77. Mauk, M. R., Reid, L. S. and Mauk, A. G. (1982) Biochemistry 21, 1843-1846
78. Chen, Y., Reizer, J., Saler, Jr., M. H., Fairbrother, W. J. and Wright, P. E. (1993) Biochemistry 32, 32-37
79. Jones, D. N., Bycroft, M., Lubienski, M. J. and Fersht, A. R. (1993) FEBS Lett 331, 165-172
80. Clubb, R. T., Omichinski, J. G., Clore, G. M. and Gronenborn, A. M. (1994) FEBS Lett. 338, 93-97
81. Gronenborn, A. M. and Clore, G. M. (1993) J. Mol. Biol. 233, 331-335
82. Osborne, M. J., Wallis, R., Leung, K.-Y., Williams, G., Lian, L.-Y., James, R., Kleanthous, C. and Moore, G. R. (1997) Biochem. J. 323, 823-831
83. Mauk, M. R., Mauk, A. G., Weber, P. C. and Matthew, J. B. (1986) Biochemistry 25, 7085-7091
84. Rodgers, K. K., Pochapsky, T. C. and Sugar, S. G. (1988) Science 240, 1657-1659
85. Stemp, E. D. and Hoffman, B. M. (1993) Biochemistry 32, 10848-10865
86. Zhou, J. S. and Hoffman, B. M. (1994) Science 265, 1693-1696
87. Zhou, J. S., Nocek, J. M., Devan, M. L. and Hoffman, B. M. (1995) Science 269, 204-207
88. Mauk, M. R., Ferrer, J. C. and Mauk, A. G. (1994) Biochemistry 33, 12609-12614
89. McLendon, G., Zhang, Q., Wallin, S. A., Miller, R. M., Billstone, V., Spears, K. G. and Huffman, B. M. (1993) J. Am. Chem. Soc. 115, 3665-3669
90. Northrup, S. H. and Erickson, H. P. (1992) Proc. Natl. Acad. Sci. USA 89, 3338-3342