-
1
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell, W. D., Cieplak, P., Bayly, C. I., Gould, I. R., Merz, K. M., Jr., Ferguson, D. M., Spellmeyer, D. C., Fox, T., Caldwell, J. W. & Kollman, P. A. (1995). A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J. Am. Chem. Soc. 117, 5179-5197.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz K.M., Jr.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
3
-
-
0028330521
-
Local and transmitted conformational changes on complexation of an antisweetener Fab
-
Guddat, L. W., Shan, L., Anchin, J. M., Linthicum, D. S. & Edmundson, A. B. (1994). Local and transmitted conformational changes on complexation of an antisweetener Fab. J. Mol. Biol. 236, 247-274.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 247-274
-
-
Guddat, L.W.1
Shan, L.2
Anchin, J.M.3
Linthicum, D.S.4
Edmundson, A.B.5
-
4
-
-
0028798103
-
Intramolecular signaling upon complexation
-
Guddat, L. W., Shan, L., Fan, Z.-C., Andersen, K. N., Rosauer, R., Linthicum, D. S. & Edmundson, A. B. (1995). Intramolecular signaling upon complexation. FASEB J. 9, 101-106.
-
(1995)
FASEB J.
, vol.9
, pp. 101-106
-
-
Guddat, L.W.1
Shan, L.2
Fan, Z.-C.3
Andersen, K.N.4
Rosauer, R.5
Linthicum, D.S.6
Edmundson, A.B.7
-
5
-
-
0031017896
-
Refined structure of an intact IgG2a monoclonal antibody
-
Harris, L. J., Larson, S. B., Hasel, K. W. & McPherson, A. (1997). Refined structure of an intact IgG2a monoclonal antibody. Biochemistry, 36, 1581-1597.
-
(1997)
Biochemistry
, vol.36
, pp. 1581-1597
-
-
Harris, L.J.1
Larson, S.B.2
Hasel, K.W.3
McPherson, A.4
-
6
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W. L., Chandrasekhar, J., Madura, J. D., Impey, R. W. & Klein, M. L. (1983). Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 79, 926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
7
-
-
0004032583
-
-
U. S. Department of Health and Human Services, NIH, Bethesda, MD
-
Kabat, E. A., Wu, T. T., Perry, H. M., Gottesman, K. S. & Foeller, C. (1991). Sequences of Proteins of Immunological Interest, 5th edit., U. S. Department of Health and Human Services, NIH, Bethesda, MD.
-
(1991)
Sequences of Proteins of Immunological Interest, 5th Edit.
-
-
Kabat, E.A.1
Wu, T.T.2
Perry, H.M.3
Gottesman, K.S.4
Foeller, C.5
-
8
-
-
0029054988
-
Molecular dynamics of the anti-fluorescein 4-4-20 antigen-binding fragment. 1. Computer simulations
-
Lim, K. & Herron, J. N. (1995). Molecular dynamics of the anti-fluorescein 4-4-20 antigen-binding fragment. 1. Computer simulations. Biochemistry, 34, 6962-6974.
-
(1995)
Biochemistry
, vol.34
, pp. 6962-6974
-
-
Lim, K.1
Herron, J.N.2
-
9
-
-
0025365308
-
Internal movements in immunoglobulin molecules
-
Nezlin, R. (1990). Internal movements in immunoglobulin molecules. Advan. Immunol. 48, 1-40.
-
(1990)
Advan. Immunol.
, vol.48
, pp. 1-40
-
-
Nezlin, R.1
-
10
-
-
0028289241
-
Anatomy of the antibody molecule
-
Padlan, E. A. (1994). Anatomy of the antibody molecule. Mol. Immunol. 31, 169-217.
-
(1994)
Mol. Immunol.
, vol.31
, pp. 169-217
-
-
Padlan, E.A.1
-
11
-
-
0029851221
-
X-ray crystallography of antibodies
-
Padlan, E. A. (1996). X-ray crystallography of antibodies. Advan. Protein Chem. 49, 57-133.
-
(1996)
Advan. Protein Chem.
, vol.49
, pp. 57-133
-
-
Padlan, E.A.1
-
12
-
-
0004279414
-
-
University of California, San Francisco
-
Pearlman, D. A., Case, D. A., Caldwell, J. W., Ross, W. S., Cheatham, T. E., III, Ferguson, D. M., Seibel, G. L., Singh, U. C., Weiner, P. & Kollman, P. A. (1994). AMBER 4.1, University of California, San Francisco.
-
(1994)
AMBER 4.1
-
-
Pearlman, D.A.1
Case, D.A.2
Caldwell, J.W.3
Ross, W.S.4
Cheatham T.E. III5
Ferguson, D.M.6
Seibel, G.L.7
Singh, U.C.8
Weiner, P.9
Kollman, P.A.10
-
13
-
-
0029633186
-
AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules
-
Pearlman, D. A., Case, D. A., Caldwell, J. W., Ross, W. S., Cheatham, T. E., III, DeBolt, S., Ferguson, D. M., Seibel, G. L. & Kollman, P. A. (1995). AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules. Comput. Phys. Commun. 91, 1-42.
-
(1995)
Comput. Phys. Commun.
, vol.91
, pp. 1-42
-
-
Pearlman, D.A.1
Case, D.A.2
Caldwell, J.W.3
Ross, W.S.4
Cheatham T.E. III5
DeBolt, S.6
Ferguson, D.M.7
Seibel, G.L.8
Kollman, P.A.9
-
14
-
-
0029972976
-
Not just your average structures
-
Petsko, G. A. (1996). Not just your average structures. Nature Struct. Biol. 3, 565-566.
-
(1996)
Nature Struct. Biol.
, vol.3
, pp. 565-566
-
-
Petsko, G.A.1
-
15
-
-
0023870785
-
Structure determination of a monoclonal Fab fragment specific for histidine-containing protein of the phosphenolpyruvate:sugar phosphotransferase system of Escherichia coli
-
Prasad, L., Vandonselaar, M., Lee, S. J. & Delbaere, L. T. J. (1988). Structure determination of a monoclonal Fab fragment specific for histidine-containing protein of the phosphenolpyruvate:sugar phosphotransferase system of Escherichia coli. J. Biol. Chem. 263, 2571-2574.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 2571-2574
-
-
Prasad, L.1
Vandonselaar, M.2
Lee, S.J.3
Delbaere, L.T.J.4
-
16
-
-
0026587998
-
Structural evidence for induced fit as a mechanism for antibody-antigen recognition
-
Rini, J. M., Schulze-Gahmen, U. & Wilson, I. A. (1992). Structural evidence for induced fit as a mechanism for antibody-antigen recognition. Science, 255, 959-965.
-
(1992)
Science
, vol.255
, pp. 959-965
-
-
Rini, J.M.1
Schulze-Gahmen, U.2
Wilson, I.A.3
-
17
-
-
0027325038
-
Crystal structure of a human immunodeficiency virus type 1 neutralizing antibody, 50.1 in complex with its V3 loop peptide antigen
-
Rini, J. M., Stanfield, R. L., Stura, E. A., Salinas, P. A., Profy, A. T. & Wilson, I. A. (1993). Crystal structure of a human immunodeficiency virus type 1 neutralizing antibody, 50.1 in complex with its V3 loop peptide antigen. Proc. Natl Acad. Sci. USA, 90, 6325-6329.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 6325-6329
-
-
Rini, J.M.1
Stanfield, R.L.2
Stura, E.A.3
Salinas, P.A.4
Profy, A.T.5
Wilson, I.A.6
-
18
-
-
33646940952
-
Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert, J. P., Ciccotti, G. & Berendsen, H. J. C. (1977). Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J. Comput. Phys. 23, 327-341.
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
19
-
-
0023053742
-
Phosphocholine binding immunoglobulin Fab McPC60S: An X-ray diffraction study at 2.7 Å
-
Satow, Y., Cohen, G. H., Padlan, E. A. & Davies, D. R. (1986). Phosphocholine binding immunoglobulin Fab McPC60S: an X-ray diffraction study at 2.7 Å. J. Mol. Biol. 190, 593-604.
-
(1986)
J. Mol. Biol.
, vol.190
, pp. 593-604
-
-
Satow, Y.1
Cohen, G.H.2
Padlan, E.A.3
Davies, D.R.4
-
20
-
-
0023447105
-
Three-dimensional structure of an antibody-antigen complex
-
Sheriff, S., Silverton, E. W., Padlan, E. A., Cohen, G. H., Smith-Gill, S. J., Finzel, B. C. & Davies, D. R. (1987). Three-dimensional structure of an antibody-antigen complex. Proc. Natl Acad. Sci. USA, 84, 8075-8079.
-
(1987)
Proc. Natl Acad. Sci. USA
, vol.84
, pp. 8075-8079
-
-
Sheriff, S.1
Silverton, E.W.2
Padlan, E.A.3
Cohen, G.H.4
Smith-Gill, S.J.5
Finzel, B.C.6
Davies, D.R.7
-
21
-
-
0027918179
-
Major antigen-induced domain rearrangements in an antibody
-
Stanfield, R. L., Takimoto-Kamimura, M., Rini, J. M., Profy, A. T. & Wilson, I. A. (1993). Major antigen-induced domain rearrangements in an antibody. Structure, 1, 83-93.
-
(1993)
Structure
, vol.1
, pp. 83-93
-
-
Stanfield, R.L.1
Takimoto-Kamimura, M.2
Rini, J.M.3
Profy, A.T.4
Wilson, I.A.5
-
22
-
-
0028606741
-
Antibody-antigen interactions: New structures and new conformational changes
-
Wilson, I. A. & Stanfield, R. L. (1994). Antibody-antigen interactions: new structures and new conformational changes. Curr. Opin. Struct. Biol. 4, 857-867.
-
(1994)
Curr. Opin. Struct. Biol.
, vol.4
, pp. 857-867
-
-
Wilson, I.A.1
Stanfield, R.L.2
|