Sensing biological effectors through the response of bridged nucleic acids and polynucleotides fixed in liquid-crystalline dispersions

Biosensors and Bioelectronics

Volumn 13, Issue 3-4, 1998, Pages 279-291

  Yevdokimov, Yu M ^a   Salyanov, V I ^a   Lortkipanigze, G B ^a   Gedig, E ^b   Spener, F ^b   Palumbo, M ^c  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

^b ICB Institut fur Chemo und Biosensorik GmbH   (Germany)

^c UNIVERSITY OF PADOVA   (Italy)

Author keywords

CD spectra; DNA; Liquid crystalline dispersions; Polymeric chelate bridges; Polynucleotides; Quantitative determination of biologically relevant compounds

Indexed keywords

BIOSENSORS; CHELATION; LIQUID CRYSTAL POLYMERS; OPTICAL PROPERTIES; PROTEINS;

CIRCULAR DICHROISM; POLYNUCLEOTIDES;

DNA;

ASCORBIC ACID; DAUNORUBICIN; HOMOCARNOSINE; NUCLEIC ACID; POLYNUCLEOTIDE; SERUM ALBUMIN;

ARTICLE; BIOSENSOR; CHELATION; CIRCULAR DICHROISM; DISPERSION; DNA STRUCTURE; LIQUID CRYSTAL; MACROMOLECULE; NUCLEIC ACID ANALYSIS; QUANTITATIVE DIAGNOSIS;

ASCORBIC ACID; BIOSENSING TECHNIQUES; CHELATING AGENTS; CIRCULAR DICHROISM; COPPER; CRYSTALLIZATION; MACROMOLECULAR SUBSTANCES; NUCLEIC ACIDS; OSMOLAR CONCENTRATION; POLYNUCLEOTIDES; SERUM ALBUMIN, BOVINE;

BOVINAE;

EID: 0032029897     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0956-5663(97)00133-4     Document Type: Article

References (26)

1. Baran, E. J., Parajoin-Costa, B. S., Rajo, T., Saez-Puche, R., Fernandes, F., Torano, R. M., Apella, M, C., Etcheverry, S. B. and Torre, M. H. (1995) Spectroscopic, magnetic and electrochemical behaviour of copper (II) complex of carnosine. J. Inorg. Chem. 58, 279-289.
2. Belyakov, V. A., Orlov, V. P., Semenov, V. S., Skuridin, S. G. and Yevdokimov, Yu. M. (1996) Comparison of calculated and observed CD spectra of liquid crystalline dispersions formed from double-stranded DNA and from DNA complexes with coloured compounds. Liquid Cryst. 20, 777-784.
3. Bio-Rad Catalog, 1996, 316-318.
4. Brian, A. A., Frish, H. L. and Lerman, L. S. (1981) Thermodynamics and equilibrium sedimentation analysis of the close approach of DNA molecules and a molecular ordering transition. Biopolymers 20, 1305-1328.
5. Cera, C., Palu, G., Magno, S. M. and Palumbo, M. (1991) Interaction between second generation anthracyclines and DNA in the nucleosomal structure. Nucl. Acids Res. 19, 2309-2314.
6. Coble, H. D. and Holtzclaw, H. F. (1974) Chelate polymers of copper (II) with various dihydroxyquinoid ligands. J. Inorg. Nucl. Chem. 36, 1049-1053.
7. Garnier-Suillerot, A., (1988). Metal anthracycline and anthracendione complexes as a new class of anticancer agents. In: Anthracycline and anthracenedione-based anticancer agents, ed by J. W. Lown, vol. 6, Elsevier, Amsterdam, 129-161.
8. Gabbay, E. J., Grier, D., Fingerle, R. E., Reimer, R., Levy, R., Pearce, S. W. and Wilson, W. D. (1976) Interaction spesificity of the anthracyclines with deoxyribonucleic acid. Biochemistry. 15, 2062-2069.
9. Gottarelli, G., and Spada, G. P., (1994). Application of CD to the study of some cholesteric mesophases. In: Circular Dichroism: Principles and applications. ed. by Nakanishi, K., VCH, Verlagsgesellschaft, Weinheim, 105-119.
10. Greenaway, F. T. and Dabrowiak, J. C. (1982) The binding of copper ions to daunomycin and adriamycin. J. Inorg. Biochem. 16, 91-107.
11. Lown, J. W., Morgan, A. R., Yen, S. F., Wang, Y. H. and Wilson, W. D. (1985) Characteristics of the binding of the anticancer agents mitoxantrone and ametantrone and related structures to deoxyribonucleic acids. Biochemistry 24, 4028-4035.
12. Livolant, F. (1991) Ordered phases of DNA in vivo and in vitro. Physica A. 176, 117-137.
13. Mattiasson, B. and Danielson, B. (1982) Calorimetric analysis of sugars and sugar derivatives with aid of an enzyme transistor. Carbohydr. Res. 102, 273-282.
14. Moustatih, A. and Carnier-Suillerot, A. (1987) Cu(II)-5-iminodaurubicin complex. A circular dichroism study. Inorg. Chim. Acta 135, L17-L19.
15. Parsegian, A. V., Rand, R. P., Fuller, N. L. and Rao, D. C. (1986) Osmotic stress for the direct measurement of intermolecular forces. In: Methods Enzymol. 127, 400-416.
16. Salyanov, V. I., Yevdokimov, Yu. M., Varshavsky, Ya. M., Foerster, V., Stutter, E. and Berg, H. (1984) Interaction of anthracycline antibiotics with biopolymers. Studia Biophysica 104, 57-65.
17. Salyanov, V. I., Yevdokimov, Yu.M., and Varshavsky, Ya.M., (1979). Compaction of double-stranded DNA as a means for determination of its antibiotic binding constant. Antibiotiki (Russian), 2, 114-120.
18. Samori, B., Osipov, M. A., Domini, I. and Bartolini, A. (1993) Transverse dipoles added to DNA chains by drug binding can induce inversion of the long-range chirality of DNA. Int. J. Biol. Macromol. 15, 353-359.
19. Show-Jy, Lau and Sarkar, B. (1971) Ternary coordination complex between human serum albumin, copper (II), and L-histidine. J. Biol. Chem. 246, 5938-5943.
20. Turner, A. P.F., Karube, I., Wilson, G. S. (eds): Biosensors: fundamentals and applications (Russian Transl.), Moscow, Mir., p.463.
21. Yevdokimov, Yu. M., Skuridin, S. G. and Salyanov, V. I. (1988) The liquid-crystalline phases of double-stranded nucleic acids in vitro and in vivo. Liquid Cryst. 3, 1443-1459.
22. Yevdokimov, Yu. M., Skuridin, S. G. and Lortkipanidze, G. B. (1992) Liquid-crystalline dispersions of nucleic acids. Liquid Cryst 12, 1443-1459.
23. Yevdokimov, Yu. M., Salyanov, V. I. and Semenov, S. V. (1996) Analytical capacity of the DNA liquid-crystalline dispersions as biosensing units. Biosensors and Bioelectronics 11, 889-901.
24. Yevdokimov, Yu. M., Salyanov, V. I., Gedig, E. and Spener, F. (1996a) Formation of polymeric chelate briges between double-stranded DNA molecules fixed in spatial structure of liquid-crystalline dispersions.. FEBS Letters 392, 269-273.
25. Yevdokimov, Yu. M., Salyanov, V. I., Spener, F. and Palumbo, M. (1996b) Adjustable cross-linking of neighboring DNA molecules in liquid-crystalline dispersions through (daunomycin-copper) polymeric chelate complexes. Internatl. J. Biol. Macromolecules 19, 247-255.
26. Yevdokimov, Yu. M., Salyanov, V. I., Buligin, L. V., Dembo, A. T., Gedig, E., Spener, F. and Palumbo, M. (1997) Liquid-crystalline structure of nucleic acids: effect of anthracycline drugs and copper ions. J. Biomolecular Structure and Dynamics 15, 97-105.