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Volumn 36, Issue 3, 1998, Pages 463-471

The Arabidopsis AUX1 gene: A model system to study mRNA processing in plants

Author keywords

Arabidopsis thaliana; AUX1; Auxin; mRNA stability; Nonsense mediated mRNA degradation; Splicing

Indexed keywords

ARABIDOPSIS PROTEIN; AUX1 PROTEIN, ARABIDOPSIS; MESSENGER RNA; MESYLIC ACID ETHYL ESTER; PHYTOHORMONE; RNA PRECURSOR; VEGETABLE PROTEIN;

EID: 0032005083     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1005961303167     Document Type: Article
Times cited : (36)

References (46)
  • 2
    • 0028993860 scopus 로고
    • Impaired splicing of phytochrome B pre-mRNA in a novel phyB mutant of Arabidopsis
    • Bradley JM, Whitelam GC, Harberd NP: Impaired splicing of phytochrome B pre-mRNA in a novel phyB mutant of Arabidopsis. Plant Mol Biol 27: 1133-1142 (1995).
    • (1995) Plant Mol Biol , vol.27 , pp. 1133-1142
    • Bradley, J.M.1    Whitelam, G.C.2    Harberd, N.P.3
  • 3
    • 0023055381 scopus 로고    scopus 로고
    • A catalogue of splice site junction and putative branch point sequences from plant introns
    • Brown JWS: A catalogue of splice site junction and putative branch point sequences from plant introns. Nucl Acids Res 14: 9549-9559 (1996).
    • (1996) Nucl Acids Res , vol.14 , pp. 9549-9559
    • Brown, J.W.S.1
  • 4
    • 0030295312 scopus 로고    scopus 로고
    • Arabidopsis intron mutations and pre-mRNA splicing
    • Brown JWS: Arabidopsis intron mutations and pre-mRNA splicing. Plant J 10: 771-780 (1996).
    • (1996) Plant J , vol.10 , pp. 771-780
    • Brown, J.W.S.1
  • 7
    • 0028675869 scopus 로고
    • In vivo analysis of intron processing using splicing-dependent reporter gene assays
    • Carle-Urioste JC, Ko CH, Benito M-I, Walbot V. In vivo analysis of intron processing using splicing-dependent reporter gene assays. Plant Mol. Biol. 26: 1785-1795 (1994).
    • (1994) Plant Mol. Biol. , vol.26 , pp. 1785-1795
    • Carle-Urioste, J.C.1    Ko, C.H.2    Benito, M.-I.3    Walbot, V.4
  • 8
    • 0025162587 scopus 로고
    • Translation to near the distal end of the penultimate exon is required for normal levels of spliced thiosephosphate isomerase mRNA
    • Cheng J, Fogel-Petrovic M, Maquat LE: Translation to near the distal end of the penultimate exon is required for normal levels of spliced thiosephosphate isomerase mRNA. Mol Cell Biol 10: 5215-5225 (1990).
    • (1990) Mol Cell Biol , vol.10 , pp. 5215-5225
    • Cheng, J.1    Fogel-Petrovic, M.2    Maquat, L.E.3
  • 9
    • 0029348072 scopus 로고
    • Purification and characterisation of the Upf1 protein: A factor involved in translation and mRNA degradation
    • Czaplinski K, Weng Y, Hagan KW, Peltz SW: Purification and characterisation of the Upf1 protein: a factor involved in translation and mRNA degradation. RNA 1: 610-623 (1995).
    • (1995) RNA , vol.1 , pp. 610-623
    • Czaplinski, K.1    Weng, Y.2    Hagan, K.W.3    Peltz, S.W.4
  • 11
    • 0025373986 scopus 로고
    • Expression of β amyloid protein precursor mRNAs: Recognition of a novel alternatively spliced form and quantitation in Alzheimer's disease using PCR
    • Golde TE, Estus S, Usiak M, Younkin LH, Younkin SG: Expression of β amyloid protein precursor mRNAs: recognition of a novel alternatively spliced form and quantitation in Alzheimer's disease using PCR. Neuron 4: 253-267 (1990).
    • (1990) Neuron , vol.4 , pp. 253-267
    • Golde, T.E.1    Estus, S.2    Usiak, M.3    Younkin, L.H.4    Younkin, S.G.5
  • 12
    • 0024967250 scopus 로고
    • The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing
    • Goodall GJ, Filipowicz W: The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing. Cell 58: 473-483 (1989).
    • (1989) Cell , vol.58 , pp. 473-483
    • Goodall, G.J.1    Filipowicz, W.2
  • 13
    • 0025799927 scopus 로고
    • Different effects of intron nucleotide composition and secondary structure on pre-mRNA splicing in monocot and dicot plants
    • Goodall GJ, Filipowicz W: Different effects of intron nucleotide composition and secondary structure on pre-mRNA splicing in monocot and dicot plants. EMBO J 10: 2635-2644 (1991).
    • (1991) EMBO J , vol.10 , pp. 2635-2644
    • Goodall, G.J.1    Filipowicz, W.2
  • 14
    • 0028861358 scopus 로고
    • Characterisation of cis-acting sequences and decay intermediates involved in nonsense-mediated mRNA turnover
    • Hagan KW, Ruiz-Echevarria MJ, Quan Y, Peltz SW: Characterisation of cis-acting sequences and decay intermediates involved in nonsense-mediated mRNA turnover. Mol Cell Biol 15: 809-823 (1995).
    • (1995) Mol Cell Biol , vol.15 , pp. 809-823
    • Hagan, K.W.1    Ruiz-Echevarria, M.J.2    Quan, Y.3    Peltz, S.W.4
  • 16
    • 0028948708 scopus 로고    scopus 로고
    • Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen
    • He F, Brown AH, Jacobsen A: Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen. Genes & Devel 9: 437-454 (1997).
    • (1997) Genes & Devel , vol.9 , pp. 437-454
    • He, F.1    Brown, A.H.2    Jacobsen, A.3
  • 17
    • 0031025296 scopus 로고
    • Upf1p, Nmd2p and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway
    • He F, Jacobson A: Upf1p, Nmd2p and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway. Mol Cell Biol 17: 1580-1594 (1995).
    • (1995) Mol Cell Biol , vol.17 , pp. 1580-1594
    • He, F.1    Jacobson, A.2
  • 18
    • 0029240333 scopus 로고
    • The axr4 auxin-resistant mutants of Arabidopsis thaliana define a gene important for root gravitropism and lateral root initiation
    • Hobbie L, Estelle M: The axr4 auxin-resistant mutants of Arabidopsis thaliana define a gene important for root gravitropism and lateral root initiation. Plant J 7: 211-220 (1995).
    • (1995) Plant J , vol.7 , pp. 211-220
    • Hobbie, L.1    Estelle, M.2
  • 19
    • 0022051850 scopus 로고
    • Characterisation cf two Phaseolus vulgaris phytohemagglutinin genes closely linked on the chromosome
    • Hoffmann LM, Donaldson DD: Characterisation cf two Phaseolus vulgaris phytohemagglutinin genes closely linked on the chromosome. EMBO J 4: 883-889 (1985).
    • (1985) EMBO J , vol.4 , pp. 883-889
    • Hoffmann, L.M.1    Donaldson, D.D.2
  • 20
    • 0029829071 scopus 로고    scopus 로고
    • SPINDLY-a tetratricopeptide repeat protein involved in gibberellin signal transduction in Arabidopsis
    • Jacobsen SE, Binkowski K, Olszewski NE: SPINDLY-a tetratricopeptide repeat protein involved in gibberellin signal transduction in Arabidopsis. Proc Natl Acad Sci USA 93: 9292-9296 (1996).
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 9292-9296
    • Jacobsen, S.E.1    Binkowski, K.2    Olszewski, N.E.3
  • 21
    • 0024655993 scopus 로고
    • A frameshift mutation prevents Kunitz trypsin inhibitor mRNA accumulation in soybean embryos
    • Jofuku KD, Schipper RD, Goldberg RB: A frameshift mutation prevents Kunitz trypsin inhibitor mRNA accumulation in soybean embryos. Plant Cell 1: 427-435 (1989).
    • (1989) Plant Cell , vol.1 , pp. 427-435
    • Jofuku, K.D.1    Schipper, R.D.2    Goldberg, R.B.3
  • 22
    • 0028050545 scopus 로고
    • Direct sequencing of PCR products in agarose gel slices
    • Khorana S, Gagel RF, Cote GJ: Direct sequencing of PCR products in agarose gel slices. Nucl Acids Res 22: 3425-3426 (1994).
    • (1994) Nucl Acids Res , vol.22 , pp. 3425-3426
    • Khorana, S.1    Gagel, R.F.2    Cote, G.J.3
  • 23
    • 0029068677 scopus 로고
    • A SecY homolog in Arabidopsis thaliana: Sequence of a full-length cDNA clone and import of the precursor protein into chloroplasts
    • Laidler V, Chaddock AM, Knott TG, Walker D, Robinson C: A SecY homolog in Arabidopsis thaliana: sequence of a full-length cDNA clone and import of the precursor protein into chloroplasts. J Biol Chem 270: 17664-17667 (1995).
    • (1995) J Biol Chem , vol.270 , pp. 17664-17667
    • Laidler, V.1    Chaddock, A.M.2    Knott, T.G.3    Walker, D.4    Robinson, C.5
  • 24
    • 0026773782 scopus 로고
    • Gene products that promote mRNA turnover in Saccharomyces cerevisiae
    • Leeds P, Wood JM, Lee B-S, Culbertson MR: Gene products that promote mRNA turnover in Saccharomyces cerevisiae. Mol Cell Biol 12: 2165-2177 (1992).
    • (1992) Mol Cell Biol , vol.12 , pp. 2165-2177
    • Leeds, P.1    Wood, J.M.2    Lee, B.-S.3    Culbertson, M.R.4
  • 25
    • 0025786141 scopus 로고
    • The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon
    • Leeds P, Peltz SW, Jacobson A, Culbertson MR: The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon. Genes & Devel 5: 2303-2314 (1991).
    • (1991) Genes & Devel , vol.5 , pp. 2303-2314
    • Leeds, P.1    Peltz, S.W.2    Jacobson, A.3    Culbertson, M.R.4
  • 26
    • 0030111434 scopus 로고    scopus 로고
    • Mapping of branchpoint nucleotides in mutant pre-mRNAs expressed in plant cells
    • Liu H-X, Filipowicz W: Mapping of branchpoint nucleotides in mutant pre-mRNAs expressed in plant cells. Plant J 9: 381-389 (1996).
    • (1996) Plant J , vol.9 , pp. 381-389
    • Liu, H.-X.1    Filipowicz, W.2
  • 27
    • 0023654956 scopus 로고
    • Improved method for the isolation of RNA from plant tissues
    • Logemann J, Schell J, Willmitzer L: Improved method for the isolation of RNA from plant tissues. Anal Biochem 163: 16-20 (1987).
    • (1987) Anal Biochem , vol.163 , pp. 16-20
    • Logemann, J.1    Schell, J.2    Willmitzer, L.3
  • 28
    • 0027219254 scopus 로고
    • 3′ splice site selection in dicot plant nuclei is position dependent
    • Lou H, McCullough AJ, Schuler MA: 3′ splice site selection in dicot plant nuclei is position dependent. Mol Cell Biol 13: 4485-4493 (1993).
    • (1993) Mol Cell Biol , vol.13 , pp. 4485-4493
    • Lou, H.1    McCullough, A.J.2    Schuler, M.A.3
  • 29
    • 0019296713 scopus 로고
    • Mutants of Arabidopsis thaliana with altered responses to auxins and gravity
    • Maher EP, Martindale SJB: Mutants of Arabidopsis thaliana with altered responses to auxins and gravity. Biochem Genet 18: 1041-1053 (1980).
    • (1980) Biochem Genet , vol.18 , pp. 1041-1053
    • Maher, E.P.1    Martindale, S.J.B.2
  • 30
    • 0027406041 scopus 로고
    • Factors affecting authentic 5′ splice site selection in plant nuclei
    • McCullough A, Lou H, Schuler MA: Factors affecting authentic 5′ splice site selection in plant nuclei. Mol Cell Biol 13: 1323-1331 (1993).
    • (1993) Mol Cell Biol , vol.13 , pp. 1323-1331
    • McCullough, A.1    Lou, H.2    Schuler, M.A.3
  • 31
    • 0028410547 scopus 로고
    • Genetic and molecular analysis of an allelic series of cop1 mutants suggests functional roles for the multiple protein domains
    • McNellis TW, von Arnim AG, Araki T, Komeda Y, Miséra S, Deng X-W: Genetic and molecular analysis of an allelic series of cop1 mutants suggests functional roles for the multiple protein domains. Plant Cell 6: 487-500 (1994).
    • (1994) Plant Cell , vol.6 , pp. 487-500
    • McNellis, T.W.1    Von Arnim, A.G.2    Araki, T.3    Komeda, Y.4    Miséra, S.5    Deng, X.-W.6
  • 32
    • 84989748967 scopus 로고
    • The growth and gravitropic responses of wild-type and auxin-resistant mutants of Arabidopsis thaliana
    • Mirza JI, Olsen GM, Iversen T-H, Maher EP: The growth and gravitropic responses of wild-type and auxin-resistant mutants of Arabidopsis thaliana. Physiol Plant 60: 516-522 (1984).
    • (1984) Physiol Plant , vol.60 , pp. 516-522
    • Mirza, J.I.1    Olsen, G.M.2    Iversen, T.-H.3    Maher, E.P.4
  • 33
    • 0027932513 scopus 로고
    • Premature translation termination triggers mRNA decapping
    • Muhlrad D, Parker R: Premature translation termination triggers mRNA decapping. Nature 370: 578-581 (1994).
    • (1994) Nature , vol.370 , pp. 578-581
    • Muhlrad, D.1    Parker, R.2
  • 34
    • 0025083338 scopus 로고
    • Reversible root tip rotation in Arabidopsis seedlings induced by obstacle-touching stimulus
    • Okada K, Shimura Y: Reversible root tip rotation in Arabidopsis seedlings induced by obstacle-touching stimulus. Science 250: 274-276 (1990).
    • (1990) Science , vol.250 , pp. 274-276
    • Okada, K.1    Shimura, Y.2
  • 35
    • 0027219029 scopus 로고
    • mRNA destabilisation triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor
    • Peltz SW, Brown AH, Jacobsen A: mRNA destabilisation triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor. Genes & Devel 7: 1737-1754 (1993).
    • (1993) Genes & Devel , vol.7 , pp. 1737-1754
    • Peltz, S.W.1    Brown, A.H.2    Jacobsen, A.3
  • 36
    • 0000626551 scopus 로고
    • The aux1 mutation of Arabidopsis confers both auxin and ethylene resistance
    • Pickett BF, Wilson AK, Estelle M: The aux1 mutation of Arabidopsis confers both auxin and ethylene resistance. Plant Physiol 94: 1462-1466 (1990).
    • (1990) Plant Physiol , vol.94 , pp. 1462-1466
    • Pickett, B.F.1    Wilson, A.K.2    Estelle, M.3
  • 37
    • 0027382460 scopus 로고
    • mRNA surveillance by the Caenorhabditis elegans smg genes
    • Pulak R, Anderson P: mRNA surveillance by the Caenorhabditis elegans smg genes. Genes & Devel 10: 1885-1897 (1993).
    • (1993) Genes & Devel , vol.10 , pp. 1885-1897
    • Pulak, R.1    Anderson, P.2
  • 38
    • 0028940855 scopus 로고
    • Genetic analysis of ethylene signal transduction in Arabidopsis thaliana: Five novel mutant loci integrated into a stress response pathway
    • Roman G, Lubarsky B, Kieber JJ, Rothenberg M, Ecker JR: Genetic analysis of ethylene signal transduction in Arabidopsis thaliana: five novel mutant loci integrated into a stress response pathway. Genetics 139: 1393-1409 (1995).
    • (1995) Genetics , vol.139 , pp. 1393-1409
    • Roman, G.1    Lubarsky, B.2    Kieber, J.J.3    Rothenberg, M.4    Ecker, J.R.5
  • 39
    • 0030111219 scopus 로고    scopus 로고
    • Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency
    • Simpson CG, Clark G, Davidson D, Smith P, Brown JWS: Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency. Plant J 9: 369-380 (1996).
    • (1996) Plant J , vol.9 , pp. 369-380
    • Simpson, C.G.1    Clark, G.2    Davidson, D.3    Smith, P.4    Brown, J.W.S.5
  • 40
    • 0030255869 scopus 로고    scopus 로고
    • Splicing of precursors to mRNA in higher plants: Mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery
    • Simpson GG, Filipowicz W: Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery. Plant Mol Biol 32: 1-41 (1996).
    • (1996) Plant Mol Biol , vol.32 , pp. 1-41
    • Simpson, G.G.1    Filipowicz, W.2
  • 41
    • 0027720289 scopus 로고
    • Post-transcriptional regulation of nuclear-encoded genes in higher plants: The roles of mRNA stability and translation
    • Sullivan ML, Green PJ: Post-transcriptional regulation of nuclear-encoded genes in higher plants: the roles of mRNA stability and translation. Plant Mol Biol 23: 1091-1104 (1993).
    • (1993) Plant Mol Biol , vol.23 , pp. 1091-1104
    • Sullivan, M.L.1    Green, P.J.2
  • 42
    • 0030238338 scopus 로고    scopus 로고
    • Premature nonsense codons decrease the stability of phytohemagglutinin mRNA in a position-dependent manner
    • van Hoof A, Green PJ: Premature nonsense codons decrease the stability of phytohemagglutinin mRNA in a position-dependent manner. Plant J 10: 415-424 (1996).
    • (1996) Plant J , vol.10 , pp. 415-424
    • Van Hoof, A.1    Green, P.J.2
  • 43
    • 0025388973 scopus 로고
    • Expression of a pseudogene in transgenic tobacco: A frameshift mutation prevents mRNA accumulation
    • Voelker TA, Moreno J, Chrispeels MJ: Expression of a pseudogene in transgenic tobacco: a frameshift mutation prevents mRNA accumulation. Plant Cell 2: 255-261 (1990).
    • (1990) Plant Cell , vol.2 , pp. 255-261
    • Voelker, T.A.1    Moreno, J.2    Chrispeels, M.J.3
  • 44
    • 0000080943 scopus 로고
    • Molecular analysis of two phtohemagglutinin genes and their expression in Phaseolus vulgaris cv. Pinto, a lectin-deficient cultivar of the bean
    • Voelker TA, Staswick P, Chrispeels MJ: Molecular analysis of two phtohemagglutinin genes and their expression in Phaseolus vulgaris cv. Pinto, a lectin-deficient cultivar of the bean. EMBO J 5: 3075-3082 (1986).
    • (1986) EMBO J , vol.5 , pp. 3075-3082
    • Voelker, T.A.1    Staswick, P.2    Chrispeels, M.J.3
  • 45
    • 0029845144 scopus 로고    scopus 로고
    • Evidence that the decay of nucleus-associated nonsense mRNA for human triosephosphate isomerase involves nonsense codon recognition after splicing
    • Zhang J, Maquat LE: Evidence that the decay of nucleus-associated nonsense mRNA for human triosephosphate isomerase involves nonsense codon recognition after splicing. RNA 2: 235-243 (1996).
    • (1996) RNA , vol.2 , pp. 235-243
    • Zhang, J.1    Maquat, L.E.2
  • 46
    • 0028945345 scopus 로고
    • Identification and characterisation of a sequence motif involved in nonsense-mediated mRNA decay
    • Zhang S, Ruiz-Echevarria MJ, Quan Y, Peltz SW: Identification and characterisation of a sequence motif involved in nonsense-mediated mRNA decay. Mol Cell Biol 15: 2231-2244 (1995).
    • (1995) Mol Cell Biol , vol.15 , pp. 2231-2244
    • Zhang, S.1    Ruiz-Echevarria, M.J.2    Quan, Y.3    Peltz, S.W.4


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