Genetic analysis of the diversity and origin of hantaviruses in Peromyscus leucopus mice in North America

Journal of Virology

Volumn 72, Issue 1, 1998, Pages 57-64

  Morzunov, Sergey P ^a,b,c   Rowe, Joan E ^a   Ksiazek, Thomas G ^b   Peters, Clarence J ^b   Jeor, Stephen C St ^a   Nichol, Stuart T ^b  

^a UNIVERSITY OF NEVADA SCHOOL OF MEDICINE   (United States)

^b CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^c UNIVERSITY OF NEVADA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; BIODIVERSITY; CELL MIGRATION; CRICETIDAE; GENETIC ANALYSIS; GEOGRAPHIC DISTRIBUTION; HANTAVIRUS; HAPLOTYPE; MOUSE; NONHUMAN; NORTH AMERICA; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; VIRUS GENOME;

EID: 0031985311     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.72.1.57-64.1998     Document Type: Article

References (62)

1. Anderson, S., A. T. Bankier, B. G. Barrell, M. H. L. de Bruijn, A. R. Coulson, J. Drouin, I. C. Eperon, D. P. Nierlich, B. A. Roe, F. Sanger, P. H. Schreier, A. J. H. Smith, R. Staden, and I. G. Young. 1981. Sequence and organization of the human mitochondrial genome. Nature 290:457-465.
2. Antic, D., C. Yong Kang, K. Spik, C. S. Schmaljohn, O. Vapalahti, and A. Vaheri. 1992. Comparison of the deduced gene products of the L, M and S genome segments of hantaviruses. Virus Res. 24:35-46.
3. Arikawa, J., H. F. Lapenotiere, L. Iacono-Connors, M. Wang, and C. S. Schmaljohn. 1990. Coding properties of the S and M genome segments of Sapporo rat virus: comparison to other causative agents of hemorrhagic lever with renal syndrome. Virology 176:114-125.
4. Baker, R. H. 1968. Habitats and distribution, p. 98-126. In J. A. King (ed.) Biology of Peromyscus (Rodentia). Special publication. American Society of Mammalogists, Lawrence, Kans.
5. Baker, R. J., L. W. Robbins, F. B. Stangl, Jr., and E. C. Birney. 1983. Chromosomal evidence for a major subdivision in Peromyscus leucopus. J. Mammal. 64:356-359.
6. Bibb, M. J., R. A. van Etten, C. T. Wright, M. W. Walberg, and D. A. Clayton. 1981. Sequence and gene organization of mouse mitochondrial DNA. Cell 26:167-180.
7. Blin, N., and D. W. Stafford. 1976. A general method for isolation of high molecular weight DNA from eukaryotes. Nucleic Acids Res. 3:2303-2308.
8. Carleton, M. D. 1989. Systematics and evolution, p. 7-141. In G. L. Kirkland, Jr., and J. N. Layne (ed.), Advances in the study of Peromyscus (Rodentia). Texas Tech University Press, Lubbock, Tex.
9. Childs, J. E., T. G. Ksiazek, C. F. Spiropoulou, J. W. Krebs, S. Morzunov, G. O. Maupin, K. L. Gage, P. Rollin, J. Sarisky, R. Enscore, C. J. Peters, and S. T. Nichol. 1994. Serologic and genetic identification of Peromyscus maniculatus as the primary rodent reservoir for a new hantavirus in the south-western United States. J. Infect. Dis. 169:1271-1280.
10. Chizhikov, V. E., C. F. Spiropoulou, S. P. Morzunov, M. C. Monroe, C. J. Peters, and S. T. Nichol. 1995. Complete genetic characterization and analysis of isolation of Sin Nombre virus. J. Virol. 69:8132-8136.
11. Dietrich, N., S. Pruden, T. G. Ksiazek, S. P. Morzunov, and J. W. Camp. 1997. A small-scale survey of hantavirus in mammals from Indiana. J. Wildl. Dis. 33:818-822.
12. Duchin, J. S., F. T. Koster, C. J. Peters, G. L. Simpson, B. Tempest, S. R. Zaki, T. G. Ksiazek, P. E. Rollin, S. T. Nichol, E. T. Umland, R. L. Moolenaar, S. E. Reef, K. B. Nolte, M. M. Gallaher, J. C. Butler, R. F. Breiman, and the Hantavirus Study Group. 1994. Hantavirus pulmonary syndrome: a clinical description of 17 patients with a newly recognized disease. N. Engl. J. Med. 330:949-955.
13. Elliott, L. H., T. G. Ksiazek, P. E. Rollin, C. F. Spiropoulou, S. P. Morzunov, M. Monroe, C. S. Goldsmith, C. D. Humphrey, S. R. Zaki, J. W. Krebs, G. Maupin, K. Gage, J. E. Childs, S. T. Nichol, and C. J. Peters. 1994. Isolation of the causative agent of hantavirus pulmonary syndrome. Am. J. Trop. Med. Hyg. 51:102-108.
14. Elliott, R. M., C. S. Schmaljohn, and M. S. Collet. 1991. Bunyaviridae genome structure and gene expression. Curr. Top. Microbiol. Immunol. 169:91-141.
15. Gadaleta, G., G. Pepe, G. De Candia, C. Quagliariello, E. Sbisa, and C. Saccone. 1989. The complete nucleotide sequence of the Rattus norvegicus mitochondrial genome: cryptic signals revealed by comparative analysis between vertebrates. J. Mol. Evol. 28:497-516.
16. Giebel, L. B., R. Stohwasser, L. Zoeller, E. K. Bautz, and G. Darai. 1989. Determination of the coding capacity of the M genome segment of Nephropathia epidemica virus strain Hallnas B1 by molecular cloning and nucleotide sequence analysis. Virology 172:498-505.
17. Hall, E. R. 1981. Mammals of North America, 2nd ed. John Wiley and Sons, New York, N.Y.
18. Henderson, W. W., M. C. Monroe, S. C. St. Jeor, W. P. Thayer, J. E. Rowe, C. J. Peters, and S. T. Nichol. 1996. Naturally occurring Sin Nombre virus genetic reassortants. Virology 214:602-610.
19. Hillis, D. M., J. P. Huelsenbeck, and C. W. Cunningham. 1994. Application and accuracy of molecular phylogenies. Science 264:671-677.
20. Hjelle, B., B. Anderson, N. Torrez-Martinez, W. Song, W. L. Gannon, and T. L. Yates. 1995. Prevalence and geographic genetic variation of hantaviruses of New World harvest mice (Reithrodontomys): identification of a divergent genotype from a Costa Rican Reithrodontomys mexicanus. Virology 207:452-459.
21. Hjelle, B., F. Chavez-Giles, N. Torrez-Martinez, T. Yates, J. Sarisky, J. Webb, and M. Ascher. 1994. Genetic identification of a novel hantavirus of the harvest mouse Reithrodontomys megalotis. J. Virol. 68:6751-6754.
22. Hjelle, B., S. A. Jenison, D. E. Goade, W. B. Green, R. M. Feddersen, and A. A. Scott. 1995. Hantaviruses: clinical, microbiologic, and epidermologic aspects. Crit. Rev. Clin. Lab. Sci. 32:469-508.
23. Hjelle, B., J. Krolikowski, N. Torrez-Martinez, F. Chavez-Giles, C. Vanner, and E. Laposata. 1995. Phylogenetically distinct hantavirus implicated in a case of hantavirus pulmonary syndrome in the Northeastern United States. J. Med. Virol. 46:21-27.
24. Hjelle, B., S.-W. Lee, W. Song, N. Torrez-Martinez, J.-W. Song, R. Yanagihara, I. Gavrilovskaya, and E. R. Mackow. 1995. Molecular linkage of hantavirus pulmonary syndrome to the white-footed mouse, Peromyscus leucopus: genetic characterization of the M genome of New York virus. J. Virol. 69:8137-8141.
25. Hogan, K. M., M. C. Hedin, H. S. Koh, S. K. Davis, and I. F. Greenbaum. 1993. Systematic and taxonomic implications of karyotypic, electrophoretic, and mitochondrial-DNA variation in Peromyscus from the Pacific Northwest. J. Mammal. 74:819-831.
26. Hooper, E. T. 1968. Classification, p. 27-74. In J. A. King (ed.), Biology of Peromyscus. Special publication. American Society of Mammalogists, Lawrence, Kans.
27. Jenison, S., T. Yamada, C. Morris, B. Anderson, N. Torrez-Martinez, N. Keller, and B. Hjelle. 1994. Characterization of human antibody responses to Four Corners hantavirus infections among patients with hantavirus pulmonary syndrome. J. Virol. 68:3000-3006.
28. Khan, A. S., C. F. Spiropoulou, S. Morzunov, S. R. Zaki, M. A. Kohn, S. R. Nawas, L. McFarland, and S. T. Nichol. 1995. Fatal illness associated with a new hantavirus in Louisiana. J. Med. Virol. 46:281-286.
29. Kumar, S., K. Tamura, and M. Nei. 1993. MEGA: molecular evolutionary genetics analysis, version 1.01. The Pennsylvania State University, University Park, Pa. (Computer program.)
30. Li, D., A. L. Schmaljohn, J. Anderson, and C. S. Schmaljohn. 1995. Complete nucleotide sequences of the M and S segments of two hantavirus isolates from California: evidence for reassortment in nature among viruses related to hantavirus pulmonary syndrome. Virology 206:973-983.
31. Lopez, N., P. Padula, C. Rossi, M. E. Lazaro, and M. T. Franze-Fernandez. 1996. Genetic identification of a new hantavirus causing severe pulmonary syndrome in Argentina. Virology 220:223-226.
32. Maddison, W. P., and D. R. Maddison. 1992. MacClade: analysis of phylogeny and character evolution, version 3.05. Sinauer Associates, Sunderland, Mass. (Computer program.)
33. Mandl, C. W., F. X. Heinz, E. Puchhammer-Stockl, and C. Kunz. 1991. Sequencing the termini of capped viral RNA by 5′-3′ ligation and PCR. BioTechniques 10:485-486.
34. McKee, K. T., Jr., J. W. LeDuc, and C. J. Peters. 1991. Hantaviruses, p. 615-632. In R. B. Belshe (ed.), Textbook of human virology, 2nd ed. Mosby Year Book, St. Louis, Mo.
35. Monroe, M. C., S. P. Morzunov, A. Johnson, M. Bowen, H. Artsob, T. Yates, T. G. Ksiazek, and S. T. Nichol. 1997. Unpublished results.
36. Morzunov, S. P., H. Feldmann, C. F. Spiropoulou, V. A. Semenova, P. E. Rollin, T. G. Ksiazek, C. J. Peters, and S. T. Nichol. 1995. A newly recognized virus associated with a fatal case of hantavirus pulmonary syndrome in Louisiana. J. Virol. 69:1980-1983.
37. Morzunov, S. P., S. C. St. Jeor, T. L. Yates, J. Rowe, T. G. Ksiazek, C. J. Peters, and S. T. Nichol. 1996. Co-evolution of North American Peromyscus-borne hantaviruses with specific rodent hosts, W 11-5, p. 23. In Abstracts of the Xth International Congress of Virology 1996. Virology Division, International Union of Microbiological Societies, Jerusalem, Israel.
38. Nelson, K., R. J. Baker, and R. L. Honeycutt. 1987. Mitochondrial DNA and protein differentiation between hybridizing cytotypes of the white-footed mouse, Peromyscus leucopus. Evolution 4:864-872.
39. Nichol, S. T., T. G. Ksiazek, P. E. Rollin, and C. J. Peters. 1996. Hantavirus pulmonary syndrome and newly described hantaviruses in the United States, p. 269-280. In R. M. Elliott (ed.), The Bunyaviridae. Plenum Press, New York, N.Y.
40. Nichol, S. T., C. Spiropoulou, S. Morzunov, P. E. Rollin, T. G. Ksiazek, H. Feldmann, A. Sanchez, J. Childs, S. Zaki, and C. J. Peters. 1993. Genetic identification of a hantavirus associated with an outbreak of acute respiratory illness. Science 262:914-917.
41. Osgood, W. H. 1909. Revision of the mice of the American genus Peromyscus. N. Am. Fauna 28:1-285.
42. Parrington, M. A., P. W. Lee, and C. Y. Kang. 1991. Molecular characterization of the Prospect Hill virus M RNA segment: comparison with the M RNA segments of other hantaviruses. J. Gen. Virol. 72:1845-1854.
43. Plyusnin, A., O. Vapalahti, H. Lankinen, H. Lehvaeslaiho, N. Apekina, Y. Myasnikov, H. Kallio-Kokko, H. Henttonen, Å. Lundkvist, M. Brummer-Korvenkontio, I. Gavrilovskaya, and A. Vaheri. 1994. Tula virus: a newly detected hantavirus carried by European common voles. J. Virol. 68:7833-7838.
44. Plyusnin, A., O. Vapalahti, and A. Vaheri. 1996. Hantaviruses: genome structure, expression and evolution. J. Virol. 77:2677-2687.
45. Puthavathana, P., M. Dobbs, L.-J. Baek, Y.-K. Chu, H. W. Lee, and C. Y. Kang. 1993. Comparison of nucleotide sequences among hantaviruses belonging to the same serotype: an analysis of amplified DNA by thermal cycle sequencing. Virus Res. 30:161-169.
46. Ravkov, E. V., P. E. Rollin, T. G. Ksiazek, C. J. Peters, and S. T. Nichol. 1995. Genetic and serologic analysis of the Black Creek Canal virus and its association with human disease and Sigmodon hispidus infection. Virology 210: 482-489.
47. Rollin, P. E., T. G. Ksiazek, L. H. Elliott, E. V. Ravkov, M. L. Martin, S. Morzunov, W. Livingstone, M. Monroe, G. Glass, S. Ruo, A. S. Khan, J. E. Childs, S. T. Nichol, and C. J. Peters. 1995. Isolation of Black Creek Canal virus, a new hantavirus from Sigmodon hispidus in Florida. J. Med. Virol. 46:35-39.
48. Rowe, J. E., S. C. St. Jeor, J. Riolo, E. Otteson, M. C. Monroe, W. W. Henderson, T. G. Ksiazek, P. E. Rollin, and S. T. Nichol. 1995. Coexistence of several novel hantaviruses in rodents indigenous to North America. Virology 213:122-130.
49. Schmaljohn, C. S., A. L. Schmaljohn, and J. M. Dalrymple. 1987. Hantaan virus M RNA: coding strategy, nucleotide sequence, and gene order. Virology 157:31-39.
50. Song, J. W., L. J. Baek, J. W. Nagle, D. Schlitter, and R. Yanagihara. 1996. Genetic and phylogenetic analyses of hantaviral sequences amplified from archival tissues of deer mouse (Peromyscus maniculatus nubiterrae) captured in the eastern United States. Arch. Virol. 141:959-967.
51. Song, W., N. Torrez-Martinez, W. Irwin, F. J. Harrison, R. Davis, M. Ascher, M. Jay, and B. Hjelle. 1995. Isla Vista virus: a genetically novel hantavirus of the California vole Microtus californicus. J. Gen. Virol. 76:3195-3199.
52. Spiropoulou, C. F., S. Morzunov, H. Feldmann, A. Sanchez, C. J. Peters, and S. T. Nichol. 1994. Genome structure and variability of a virus causing hantavirus pulmonary syndrome. Virology 200:715-723.
53. Stangl, F. B., Jr. 1986. Aspects of a contact zone between two chromosomal races of Peromyscus leucopus (Rodentia: Cricetidae). J. Mammal. 67:465-473.
54. Swofford, D. L. 1991. PAUP: phylogenetic analysis using parsimony, version 3.1.1. Illinois Natural History Survey, Champaign, Ill. (Computer program.)
55. Torrez-Martinez, N., and B. Hjelle. 1995. Enzootic of Bayou hantavirus in rice rats (Oryzomys palustris) in 1983. Lancet 346:780-781.
56. Torrez-Martinez, N., W. Song, and B. Hjelle. 1995. Nucleotide sequence analysis of the M genomic segment of El Moro Canyon hantavirus: antigenic distinction from Four Corners hantavirus. Virology 211:336-338.
57. Van Den Bussche, R. A., R. A. Chesser, M. J. Hamilton, R. D. Bradley, C. A. Porter, and R. J. Baker. 1993. Maintenance of a narrow hybrid zone in Peromyscus leucopus: a test of alternative models. J. Mammal. 74:832-845.
58. Waters, J. H. 1963. Biochemical relationships of the mouse Peromyscus in New England. Syst. Zool. 12:122-132.
59. Williams, R. J., R. T. Bryan, J. N. Mills, E. Palma, I. Vera, F. de Velasquez, E. Baez, W. Schmidt, R. Figueroa, A. E. Mexa, C. J. Peters, S. R. Zaki. A. S. Khan, and T. G. Ksiazek. 1997. An outbreak of hantavirus pulmonary syndrome among Mennonite colonies in western Paraguay. Am. J. Trop. Med. Hyg. 57:274-282.
60. Wolff, J. O. 1986. Getting along in Appalachia. Nat. History 9:45-48.
61. Wolff, J. O. 1989. Social behavior, p. 271-291. In G. L. Kirkland, Jr., and J. N. Layne (ed.), Advances in the study of Peromyscus (Rodentia). Texas Tech University Press, Lubbock, Tex.
62. Xiao, S.-Y., J. M. LeDuc, Y. K. Chu, and C. S. Schmaljohn. 1994. Phylogenetic analysis of virus isolates in genus Hantavirus, family Bunyaviridae. Virology 198:205-217.