Bacteriophage T7 mRNA is polyadenylated

Molecular Microbiology

Volumn 27, Issue 1, 1998, Pages 23-30

  Johnson, M D ^a   Popowski, J ^a   Cao, G J ^a,b   Shen, P ^a   Sarkar, N ^a,b  

^a BOSTON BIOMEDICAL RESEARCH INSTITUTE   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA;

ARTICLE; BACTERIOPHAGE T7; POLYADENYLATION; PRIORITY JOURNAL; RNA ANALYSIS;

BACTERIOPHAGE T7; BASE SEQUENCE; DNA, COMPLEMENTARY; DNA, VIRAL; ESCHERICHIA COLI; ISOTOPE LABELING; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; POLY A; RNA, MESSENGER; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION, GENETIC; ULTRACENTRIFUGATION;

BACTERIA (MICROORGANISMS); BACTERIAL VIRUS; UNIDENTIFIED BACTERIOPHAGE;

EID: 0031973815     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.1998.00649.x     Document Type: Article

References (31)

1. August, J.T., Ortiz, P.J., and Hurwitz, J. (1962) Ribonucleic acid-dependent ribonucleotide incorporation. I. Purification and properties of the enzyme. J Biol Chem 237: 3786-3793.
2. Cao, G.-J., and Sarkar, N. (1992a) Identification of the gene for an Escherichia coli poly (A) polymerase. Proc Natl Acad Sci USA 89: 10380-10384.
3. Cao, G.-j., and Sarkar, N. (1992b) Poly (A) RNA in Escherichia coli: Nucleotide sequence at the junction of the lpp transcript and the polyadenylate moiety. Proc Natl Acad Sci USA 89: 7546-7550.
4. Cao, G.-j., Pogliano, J., and Sarkar, N. (1996) Identification of the coding region for a second poly (A) polymerase in Escherichia coli. Proc Natl Acad Sci USA 93: 11580-11585.
5. Chomczynski, P., and Sacchi, N. (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 162: 156-159.
6. Cohen, S.N. (1995) Surprises at the 3′ end of prokaryotic RNA. Cell 80: 829-832.
7. Dunn, J.J., and Studier, F.W. (1983) Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements. J Mol Biol 166: 477-535.
8. Gopalakrishna, Y., Langley, D., and Sarkar, N. (1981) Detection of high levels of polyadenylate-containing RNA in bacteria by the use of a single-step RNA isolation procedure. Nucleic Acids Res 9: 3545-3554.
9. Gubler, U., and Hoffman, B.J. (1983) A simple and very efficient method for generating cDNA libraries. Gene 25: 263-269.
10. Haugel-Nielsen, J., Hajnsdorf, E., and Régnier, P. (1996) The rpsO mRNA of Escherichia coli is polyadenylated at multiple sites resulting from endonucleolytic processing and exonucleolytic degradation. EMBO J 15: 3144-3152.
11. Ingle, C.A., and Kushner, S.R. (1996) Development of an in vitro mRNA decay system for Escherichia coli: Poly (A) polymerase I is necessary to trigger degradation. Proc Natl Acad Sci USA 93: 12926-12931.
12. Karnik, P., Taljanidisz, J., Sasvari-Szekely, M., and Sarkar, N. (1987) 3′-Terminal polyadenylate sequences of Escherichia coli tryptophan synthetase a-subunit messenger RNA. J Mol Biol 196: 347-354.
13. Kramer, R.A., Rosenberg, M., and Steitz, J.A. (1974) Nucleotide sequences of the 5′ and 3′ termini of bacteriophage T7 early messenger RNAs synthesized in vivo: evidence for sequence specificity in RNA processing. J Mol Biol 89: 767-776.
14. Lisitsky, I., Klaff, P., and Schuster, G. (1996) Addition of destabilizing poly (A)-rich sequences to endonuclease cleavage sites during the degradation of chloroplast mRNA. Proc Natl Acad Sci USA 93: 13398-13403.
15. Marrs, B.L., and Yanofsky, C. (1971) Host and bacteriophage specific messenger RNA degradation in T7-infected Escherichia coli. Nature New Biol 234: 168-170.
16. Mertens, N., Remaut, E., and Fiers, W. (1996) Increased stability of phage T7g10 mRNA is mediated by either a 5′- or a 3′-terminal stem-loop structure. Biol Chem 377: 811-817.
17. Minkley, E.G., and Pribnow, D. (1973) Transcription of the early region of bacteriophage T7: selective initiation with dinucleotides. J Mol Biol 77: 255-277.
18. Nudel, U., Soreq, H., Littauer, U., Marbaix, G., Huez, G., Leclereq, M., Hubert, E., and Chantpenne, H. (1976) Globin mRNA species containing poly (A) segments of different lengths. Their functional stability in Xenopus oocytes. Eur J Biochem 64: 115-121.
19. O'Hara, E.B., Chekanova, J.A., Ingle, C.A., Kushner, Z.R., Peters, E., and Kushner, S.R. (1995) Polyadenylylation helps regulate mRNA decay in Escherichia coli. Proc Natl Acad Sci USA 92: 1807-1811.
20. Rosenberg, M., Weissman, S., and deCrombrugghe, B. (1975) Termination of transcription in bacteriophage λ. Heterogeneous, 3‰-terminal oligo-adenylate additions and the effects of ρ factor. J Biol Chem 250: 4755-4764.
21. Sarkar, N. (1997) Polyadenylation of mRNA in prokaryotes. Annu Rev Biochem 66: 173-197.
22. Smith, G.R., and Hedgpeth, J. (1975) Oligo (A) not coded by DNA generating 3′-terminal heterogeneity in a λ phage RNA. J Biol Chem 250: 4818-4821.
23. Stahl, S.J., and Chamberlin, M.J. (1977) An expanded transcriptional map of T7 bacteriophage. Reading of minor T7 promoter sites in vitro by Escherichia coli RNA polymerase. J Mol Biol 112: 577-601.
24. Studier, F.W. (1973) Analysis of bacteriophage T7 early RNAs and proteins on slab gels. J Mol Biol 79: 237-248.
25. Studier, F.W., and Rosenberg, A.H. (1981) Genetic and physical mapping of the late region of bacteriophage T7 DNA by use of cloned fragments of T7 DNA. J Mol Biol 153: 503-525.
26. Summers, W.C. (1969) The process of infection with coliphage T7 characterization of T7 RNA by polyacrylamide gel electrophoretic analysis. Virol 39: 175-182.
27. Summers, W.C. (1970) The process of infection with coliphage T7 IV. Stability of RNA in bacteriophage-infected cells. J Mol Biol 51: 671-678.
28. Summers, W.C., Brunovskis, I., and Hyman, R.W. (1973) The process of infection with coliphage T7: Characterization and mapping of the major in vivo transcription products of the early region. J Mol Biol 74: 291-300.
29. Taljanidisz, J., Karnik, P., and Sarkar, N. (1987) Messenger ribonucleic acid for the lipoprotein of the Escherichia coli outer membrane is polyadenylated. J Mol Biol 193: 507-515.
30. Xu, F., and Cohen, S.N. (1995) RNA degradation in Escherichia coli regulated by 3′ adenylation and 5′ phosphorylation. Nature 374: 180-183.
31. Xu, F., Lin-Chao, S., and Cohen, S.N. (1993) The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates. Proc Natl Acad Sci USA 90: 6756-6760.