In vivo association of lamins with nucleic acids in Drosophila melanogaster

Journal of Cell Science

Volumn 111, Issue 1, 1998, Pages 121-129

  Rzepecki, Ryszard ^a   Bogachev, Sergei S ^a,b   Kokoza, Elena ^a,b   Stuurman, Nico ^a,c   Fisher, Paul A ^a  

^a STONY BROOK UNIVERSITY MEDICAL CENTER   (United States)

^b INSTITUTE OF CYTOLOGY AND GENETICS   (Russian Federation)

^c UNIVERSITY OF BASEL   (Switzerland)

Author keywords

Drosophila; Lamin; Nucleic acid; Photo crosslinking

Indexed keywords

BROXURIDINE; CHROMOMYCIN; DISTAMYCIN A; LAMIN;

ARTICLE; DROSOPHILA MELANOGASTER; INTERPHASE; MITOSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; PROTEIN RNA BINDING;

ADENINE; ANIMALS; BROMODEOXYURIDINE; CELLS, CULTURED; CROSS-LINKING REAGENTS; CYTOSINE; DNA; DROSOPHILA MELANOGASTER; GUANINE; INTERPHASE; LAMINS; MITOSIS; NUCLEAR PROTEINS; NUCLEIC ACID DENATURATION; PHOTOCHEMISTRY; PRECIPITIN TESTS; RNA; THYMINE;

EID: 0031965429     PISSN: 00219533     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (54)

1. Allis, C. D., Waring, G. L. and Mahowald, A.P. (1977). Mass isolation of pole cells from Drosophila melanogaster. Dev. Biol. 56, 372-381.
2. Baricheva, E. A., Berrios, M., Bogachev, S. S., Borisevich, I. V., Lapik, E. R., Sharakhov, I. V., Stuurman, N. and Fisher, P. A. (1996) DNA from Drosophila melanogaster β-heterochromatin binds specifically to nuclear lamins in vitro and the nuclear envelope in situ. Gene. 171, 171-176.
3. Berrios, M., Fisher, P. A. and Matz, E. C. (1991). Localization of a myosin heavy chain-like polypeptide to Drosophila nuclear pore complexes. Proc. Nat. Acad. Sci. USA. 88, 219-223.
4. Berrios, M., Meller, V., McConnell, M. and Fisher, P. A. (1995) Drosophila gp210, an invertebrate nuclear pore complex glycoprotein. Eur. J. Cell Biol. 67, 1-7.
5. Berrios, M., Filson, A. J., Blobel, G. and Fisher P. A. (1983). A 174-kilodalton ATPase/dATPase polypeptide and a glycoprotein of apparently identical molecular weight are common but distinct components of higher eukaryotic nuclear structural protein subtractions. J. Biol. Chem. 258, 13384-13390.
6. Blake, M. S., Johnston, K. H., Russell-Jones, G. J. and Gotschlich, E. C. (1984). A rapid sensitive method for detection of alkaline phosphatase conjugated anti-antibody on Western blots. Anal. Biochem. 136, 175-179.
7. Bode, J., Kohwi, Y., Dickinson, L., Joh, T., Klehr, D., Mielke, C. and Kohwi-Shigematsu, T. (1992). Biological significance of unwinding capability of nuclear matrix-associating DNAs. Science. 255, 195-197.
8. Bogachev, S. S., Borisevich, I. V., Fisher, P. A., Stuurman, N. and Sharakov, I. V. (1996). β-Heterochromatin in Drosophila: molecular organization and function. Molecular biological analysis of a MAR/SAR DNA sequence in centromeric heterochromatin of Drosophila melanogaster. Russian J. Genet. 32, 240-251.
9. Bossie, C. A. and Sanders, M. M. (1993). A cDNA from Drosophila melanogaster encodes a lamin C-like intermediate filament protein. J. Cell Sci. 104, 1263-1272.
10. Christova, R., Bach, I. and Galcheva-Gargova, Z. (1992) Sequences of DNA fragments contacting the nuclear lamina in vivo. DNA Cell Biol. 11, 627-636.
11. Filson, A. J., Lewis, A., Blobel, G. and Fisher, P. A. (1985). Monoclonal antibodies prepared against the major Drosophila nuclear matrix-pore complex-lamina glycoprotem bind specifically to the nuclear envelope in situ. J. Biol. Chem. 260, 3164-3172.
12. Fisher, P. A. and Smith, D. E. (1988). Affinity purification of antibodies using antigens immobilized on solid supports. Biochem. Soc. Trans. 16, 134-138.
13. Fisher, P. A., Berrios, M. and Blobel, G. (1982). Isolation and characterization of a proteinaceous subnuclear fraction composed of nuclear matrix, peripheral lamina and nuclear pore complexes from embryos of Drosophila melanogaster. J. Cell Biol. 92, 674-686.
14. Galcheva-Gargova, Z. and Dessev, G. N. (1987). Crosslinking of DNA to nuclear lamina proteins by UV irradiation in vivo. J. Cell. Biochem. 34, 163-168.
15. Glass, C. A., Glass, J. R., Taniura, H., Hasel, K. W., Blevitt, J. M. and Gerace, L. (1993). The alpha-helical rod domain of human lamins A and C contains a chromatin binding site. EMBO J. 12, 4413-4424.
16. Glass, J. R. and Gerace, L. (1990). Lamins A and C bind and assemble at the surface of mitotic chromosomes. J. Cell Biol. 111, 1047-1057.
17. Greber, U. F., Senior, A. and Gerace, L. (1990). A major glycoprotein of the nuclear pore complex is a membrane-spanning polypeptide with a large lumenal domain and a small cytoplasmic tail. EMBO J. 9, 1495-1502
18. Greher, U. F. and Gerace, L. (1992). Nuclear protein import is inhibited by an antibody to a lumenal epitope of a nuclear pore complex glycoprotein. J. Cell Biol. 116, 15-30.
19. 0 is translated from either of two developmentally regulated mRNA species apparently encoded by a single gene. J. Cell Biol. 106, 585-596.
20. Hanson, C. V. and Hearst, J. E. (1973). Bulk isolation of metaphase chromosomes from an in vitro cell line of Drosophila melanogaster. Cold Spring Harbor Symp. Quant. Biol. 38, 341-346.
21. Harlow, K. and Lane, D. (1988). Antibodies: A Laboratory Manual. Cold Spring Harbor Laboratory Cold Spring Harbor, NY.
22. Havel, C. M., Fisher, P. A. and Watson, J. A. (1992). Isopentenoid synthesis in embryonic Drosophila cells: Prenylated protein profile and prenyl group usage Arch. Biochem. Biophys. 295, 410-420.
23. 11 with chromatin in vitro mediated by a sequence element in the carboxyterminal domain. Exp. Cell Res. 197, 280-289.
24. 1 by distamycin. The role of oligo (dA) (dT) tracts. J. Mol. Biol. 210, 587-599.
25. Käs, F., and Laemmli, U. K. (1992). In vivo topoisomerase II cleavage of the Drosophila histone and satellite III repeats: DNA sequence and structural characteristics. EMBO J. 11, 705-716.
26. Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
27. Lin, L., and Fisher, P. A. (1990). Immunoaffinity purification and functional characterization of interphase and meiotic Drosophila nuclear lamin isoforms. J. Biol. Chem. 265, 12596-12601.
28. 1. Cell. 70, 949-959.
29. Ludérus, M. E., den Blaauwen, J. L., de Smit, O. J. B., Compton, D. A. and van Driel, R. (1994). Binding of matrix attachment regions to lamin polymers involves single-stranded regions and the minor groove. Mol. Cell. Biol. 14, 217-231.
30. Maus, N., Stuurman, N. and Fisher, P. A. (1995). Disassembly of the Drosophila nuclear lamina in a homologous cell-free system. J. Cell Sci. 108, 2027-2035.
31. McConnell, M., Whalen, A. M., Smith, D. E. and Fisher, P. A. (1987). Heat shock-induced changes in the structural stability of proteinaceous karyoskeletal elements in vitro and morphological effects in situ. J. Cell Biol. 105, 1087-1098.
32. McGadey, J. (1970). A tetrazolium method for non-specific alkaline phosphatase. Histochemie 23, 180-184.
33. Meller, V. H. and Fisher, P. A. (1995). Nuclear distribution of Drosophila DNA topoisomerase II is sensitive to both RNase and DNase. J. Cell Sci. 108, 1651-1657.
34. Meller, V. H., McConnell, M. and Fisher, P. A. (1994). An RNase-sensitive particle containing Drosophila melanogaster DNA topoisomerase II. J. Cell Biol. 126, 1331-1340.
35. Moss, B. and Rosenblum, E. N. (1972). Hydroxylapatite chromatography of protein- sodium dodecyl sulfate complexes. A new method for the separation of polypeptide subunits. J. Biol. Chem. 247, 5194-5198.
36. Nigg, E. A. (1992). Assembly and cell cycle dynamics of the nuclear lamina. Sem. Cell Biol. 3, 245-253.
37. Osman, M., Paz, M., Landesman, Y., Fainsod, A. and Gruenbaum, Y. (1990). Molecular analysis of the Drosophila nuclear lamin gene. Genomics. 8, 217-224.
38. Riemer, D., Stuurman, N., Berrios, M., Hunter, C., Fisher, P. A. and Weber, K. (1945). Expression of Drosophila lamin C is developmentally regulated: analogies with venebrate A-type lamins. J. Cell Sci. 108, 3189-3198.
39. 0 gene Eur. J. Cell Biol. 63, 299-306.
40. Rzepecki, R., Markiewicz, E. and Szopa, J. (1995) Identification of the proteins responsible for SAR DNA binding in nuclear matrix of Cucurbita pepo. Acta Biochim. Pollon. 42, 171-176
41. Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual. Second edition. Cold Spring Harbour Laboratory Press, Cold Spring Harbour, New York.
42. Simpson, R. B. (1974) The molecular topography of RNA polsmerase-promoter interaction. Cell 18, 277-285.
43. Smith, D. E. and Fisher, P. A. (1984). Identification developmental regulation and response to heat shock of two antigenically related forms of a major nuclear envelope protein in Drosophila embryos. Application of an improved method for affinity purification of antibodies. J. Cell Biol. 99, 20-28.
44. Smith, D. E. and Fisher, P. A. (1989). Interconversion of Drosophila nuclear lamin isoforms during oogenesis, early embryogenesis, and upon entry of cultured cells into mitosis. J. Cell Biol. 108, 255-265.
45. Smith, D. E., Gruenbaum, Y., Berrios, M. and Fisher, P. A. (1987). Biosynthesis and interconversion of Drosophila nuclear lamin isoforms during normal growth and in response to heat shock. J. Cell Biol. 105, 771-790.
46. Stuurman, N., Sasse, B. and Fisher, P. A. (1996). Intermediate filament protein polymerisation: molecular analysis of Drosophila nuclear lamin head-to-tail binding. J. Struct. Biol. 117, 1-15.
47. Stuurman, N. (1997). Identification of a conserved phosphorslation site modulating nuclear lamin polymerization. FEBS Lett. 401, 171-174.
48. Taniura, H., Glass, C. and Gerace, L. (1995). A chromatin binding site in the tail domain of nuclear lamins that interacts with core histones. J. Cell Biol. 131, 33-44
49. Van Dyke, M. W., Hertzberg, R. P. and Dervan, P.B. (1982). Map of distamycin, netropsin and actinomycin binding sites on heterogenous DNA: DNA cleavage-inhibition patterns with methidiumpropyl-EDTA Fe(II). Proc. Nat. Acad. Sci. USA. 79, 5470-5474.
50. Van Dyke, M. W. and Dervan, P.B. (1983). Chromomycin, mithramycin and olivomycin binding sites on heterogenous deoxyry bonucleic acid. Footprinting with (Methidiumpropyl-EDTA) iron (II). Biochemistry 22, 2373-2377.
51. Wedrychowski, A., Bhorjee, J. S. and Briggs, R. C. (1989) In vivo crosslinking of nuclear proteins to DNA by cis-diamminedichloroplatinum (II) in differentiating rat myoblasts. Exp. Cell Res. 183, 376-387.
52. Whalen, A. M., McConnell, M. and Fisher, P. A. (1991) Developmental regulation of Drosophila DNA topoisomerase II. J. Cell Biol. 112, 203-213.
53. Yuan, J., Simos, G. Blobel, G. and Georgatos, S. D. (1991) Binding of lamin A to polynucleosomes. J. Biol. Chem. 266, 9211-9215.
54. Zhao, K., Harel, A., Stuurman, N., Guedalia, D. and Gruenbaum, Y. (1996). Binding of matrix attachment regions to nuclear lamin is mediated by the rod domain and depends on the lamin polymerization state. FEBS Lett. 380, 161-164.