A novel approach to study the geometry of the water lumen of ion channels: Colicin Ia channels in planar lipid bilayers

Journal of Membrane Biology

Volumn 161, Issue 1, 1998, Pages 83-92

  Krasilnikov, O V ^a,b   Da Cruz, J B ^b,d   Yuldasheva, L N ^b,c   Varanda, W A ^e   Nogueira, R A ^b  

^a Institute of Bioorganic Chemistry Uzbekistan Academy of Sciences   (Uzbekistan)

^b FEDERAL UNIVERSITY OF PERNAMBUCO   (Brazil)

^c TASHKENT PEDIATRIC MEDICAL INSTITUTE   (Uzbekistan)

^d FEDERAL UNIVERSITY OF PARAÍBA   (Brazil)

^e UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

Colicin Ia; Ion channel; Methods; Nonelectrolytes; Planar lipid membranes

Indexed keywords

ION CHANNEL;

ARTICLE; GEOMETRY; HYDRODYNAMICS; ION TRANSPORT; LIPID BILAYER; MEMBRANE STRUCTURE; PATCH CLAMP; TECHNIQUE; WATER PERMEABILITY;

COLICINS; ELECTRIC CONDUCTIVITY; ION CHANNELS; LIPID BILAYERS; MODELS, BIOLOGICAL; MODELS, STRUCTURAL; SOLUTIONS; WATER;

EID: 0031963805     PISSN: 00222631     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002329900316     Document Type: Article

References (38)

1. Antonov, V.F. 1982. Lipids and Ion Permeability of Membranes. Nauka, Moscow
2. Bezrukov, S.M., Vodyanoy, I., Parsegian, V.A. 1994. Counting polymers moving through a single ion channel. Nature 370:279-281
3. Borisova, M.P., Ermishkin, L.N. 1984. Tetramethylammonium is a passing blocker of mycoheptin channels in lipid bilayer. Biol. Membrany 1(2):141-144
4. Bullock, J.O., Kolen, E.R. 1995. Ion selectivity of Colicin El:III. Anion permeability. J. Membrane Biol. 144:131-145
5. Bullock, J.O., Kolen, E.R., Shear, J.L. 1992. Ion selectivity of Colicin El. 2. Permeability to organic cations. J. Membrane Biol. 128:1-16
6. Gadji-Zade, H.A., Silberstein, A.Y. 1984. The basis of the dependence of ion channels blockage on a membrane voltage. Dokl. Acad. Nauk SSSR 275(5):1204-1207
7. Guo, X.W., Mannella, C.A. 1993. Conformational change in the mitochondrial channel, VDAC, detected by electron cryo-microscopy. Biophys. J. 64(2):545-549
8. Hall, J.E. 1975. Access resistance of a small circular pore. J. Gen. Physiol. 66:531-532
9. Hemsley, G., Busath, D. 1991. Small iminium ions block gramicidin channels in lipid bilayers. Biophys. J. 59(4):901-907
10. Holz, R., Finkelstein, A. 1970. The water and nonelectrolyte permeability induced in thin lipid membranes by polyene antibiotics nystatin and amphotericin B. J. Gen. Physiol. 56:125-145
11. Kagawa, Y., Racker, E. 1971. Partial resolution of the enzymes catalyzing oxidative phosphorylation. J. Biol. Chem. 246:5477-5487
12. Kayalar, C., Duzgunes, N. 1986. Membrane action of Colicin El: detection by the release of carboxyfluorescein and calcein from liposomes. Biochim. Biophys. Acta 860(M 141):51-56
13. Kolomitkin, O.V., Golubok, A.O., Davydov, D.N., Timofeev, V.A., Vinogradova, S.A., Tipisev, S.Ya. 1991. Ionic channels in Langmuir-Blodgett films imaged by a scanning tunneling microscope. Biophys. J. 59(4):889-893
14. Krasilnikov, O.V., Carneiro, C.M.M., Yuldasheva, L.N., Campos-de-Carvalho, A.C., Nogueira, R.A. 1996. Diameter of the mammalian porin channel in open and "closed" states: direct measurement at the single channel level in planar lipid bilayer. Braz. J. Med. Biol. Res. 29(12):1691-1697
15. Krasilnikov, O.V., Sabirov, R.Z., Ternovsky, V.I. 1991. Proteins, Ion Channels and Regulation of Ion Transport through Membranes. FAN, Tashkent
16. Krasilnikov, O.V., Sabirov, R.Z., Ternovsky, V.I., Merzliak, P.G., Muratkhodjaev, J.N. 1992. The simple method of determination of ion channels water pore radii in planar lipid bilayer membranes. FEMS Microbiol. Immunol. 105:93-100
17. Krasilnikov, O.V., Sabirov, R.Z., Ternovsky, V.I., Merzliak, P.G., Tashmukhamedov, B.A. 1988. The structure of Staphylococcus aureus alpha-toxin-induced ionic channel. Gen. Physiol. Biophys. 7:467-473
18. Krasilnikov, O.V., Yuldasheva, L.N., Nogueira, R.A., Rodrigues, C.G. 1995. The diameter of water pores formed by Colicin Ia in planar lipid bilayers. Braz. J. Med. Biol. Res. 28(6):693-698
19. Mark, J.E., Flory, P.J. 1965. The configuration of the polyoxyethylene chain. J. Am. Chem. Soc. 87:1415-1422
20. Markin, V.S., Chizmadjev, Yu.A. 1974. Induced ion transport. Yu.A. Ovchinnikov, editor, pp. 1-251. Nauka, Moscow
21. McKim, S., Hinton, J.F. 1994. Evidence of xenon transport through the gramicidin channel: a 129Xe-NMR study. Biochim. Biophys. Acta 1193:186-198
22. Montal, M., Mueller, P. 1972. Formation of bimolecular membranes from lipid monolayers and a study of their electrical properties. Proc. Natl. Acad. Sci. USA 69:3561-3566
23. Nogueira, R.A., Varanda, W.A. 1988. Properties of channels formed by Colicin Ia in planar bilayer membranes. J. Membrane Biol. 105:143-153
24. Olah, G.A., Huang, H.W., Liu, W.H., Wu, Y.L. 1991. Location of ion-binding sites in the Gramicidin channel by X-ray diffraction. J. Mol. Biol. 218(4):847-858
25. Qiu, X.-Q., Jakes, K.S., Kienker, P.K., Finkelstein, A., Slatin, S. 1996. Major transmembrane movement associated with colicin Ia channel gating. J. Gen. Physiol. 107:313-328
26. Raymond, L., Slatin, S.L., Finkelstein, A. 1985. Channels formed by Colicin El in planar lipid bilayers are large and exhibit pH-dependent ion selectivity. J. Membrane Biol. 84:173-181
27. Rempp, P. 1957. Contribution a l'étude des solution de molecules en chain a squelette oxigène. J. Chem. Phys. 54:432-453
28. Sabirov, R.Z., Krasilnikov, O.V., Ternovsky, V.I., Merzliak, P.G. 1993. Relation between ionic channel conductance and conductivity of media containing different nonelectrolytes. A novel method of pore size determination. Gen. Physiol. Biophys. 12:95-111
29. Sabirov, R.Z., Tadjibaeva, G.S., Krasilnikov, O.V., El-Sufi, S.A.F., Tashmukhamedov, B.A. 1992. Influence of hydrophilic nonelectrolytes on single ion channel conductance induced by amphotericin B in planar bilayer. Dokl. Acad. Nauk UzSSR N1:52-54
30. Scherrer, R., Gerhardt, Ph. 1971. Molecular sieving by the Bacillus megaterium cell wall and protoplast. J. Bacteriol. 107:718-735
31. Silberstein, A. Y. 1989. Blockage of amphotericin channels by nonelectrolytes. Biol. Membrany 6(12):1317-1329
32. Sizonenko, V.L. 1995. The role of image charge in ionic-electrostatic interactions of proteins and membranes. Biofizika 40:1251-1255
33. Slatin, S. 1988. Colicin El in planar lipid bilayers. Internat. J. Biochem. 20:737-744
34. Slatin, S., Jakes, K., Qiu, X.-Q., Finkelstein, A. 1993. Location of a point mutation in the open and closed Colicin Ia channel. Medical Microbiology and Immunology 182:214
35. Thinnes, F.P., Schmid, A., Benz, R., Hilschmann, N. 1990. Studies on human porin. III. Does the voltage-dependent anion channel "Porin 31HL" form part of the chloride channel complex, which is observed in different cells and thought to be affected in cystic fibrosis? Biological Chemistry Hoppe-Seyler (Berlin) 371:1047-1050
36. Unwin, N. 1995. Acetylcholine receptor channel imaged in the open state. Nature 373:37-43
37. Villarroel, A., Burnashev, N., Sakmann, B. 1995. Dimensions of the narrow portion of a recombinant NMDA receptor channel. Biophys. J. 68:866-875
38. Vodyanoy, I., Bezrukov, S.M. 1992. Sizing of an ion pore by access resistance measurement. Biophys. J. 62:10-11