Detection of transmembrane helical segments at the nucleotide level in eukaryotic membrane protein genes

Biochemistry and Molecular Biology International

Volumn 44, Issue 3, 1998, Pages 471-479

  Lesnik, T ^a   Reiss, C ^a  

^a CENTRE DE GÉNÉTIQUE MOLÉCULAIRE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; MEMBRANE PROTEIN; NUCLEIC ACID BASE; THYMINE;

ARTICLE; CODON; DNA BASE COMPOSITION; EUKARYOTE; HUMAN; NONHUMAN; NUCLEOTIDE SEQUENCE;

CODON; EUKARYOTIC CELLS; MEMBRANE PROTEINS; MODELS, MOLECULAR; PROTEIN CONFORMATION;

BACTERIA (MICROORGANISMS); EUKARYOTA;

EID: 0031940595     PISSN: 10399712     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (7)

1. Lesnik T. & Reiss C. (1996), A method to detect transmembrane helical segments at the nucleotide level, Biochem. Mol. Biol. Internat., 38,937-955.
2. Dessen, P., Fondrat, C., Valencien, C. & Mugnier, C. (1990), BISANCE : a trench service for access to biomolecular sequence database, CABIOS, 6, 355-356.
3. Higgins D.G. & Sharp P.M. (1988), CLUSTAL : a package for performing multiple sequence alignments on a microcomputer, Gene, 73, 237-244.
4. Engelman, D.M., Steitz, T.A. and Goldman, A. (1986), Identifying nonpolar transbilayer helices in amino-acid sequences of membrane proteins, Ann. Rev. Biophys. Biophys. Chem., 15, 321-353.
5. Claros, M. G. and von Heijne, G. (1994), TopPred II : an improved software for membrane protein structure predictions, CABIOS, 10, 685-686.
6. Claverie, J.M. and Daulmerie, C. (1991), Smoothing profiles with sliding windows : better to wear a hat, CABIOS, 7, 113-115.
7. Jacobs, R.E. & White, S.H. (1989), The nature of the hydrophobic binding of small peptides at the lipid surface: implications for the insertion of transbilayer helices, Biochemistry, 28, 3421-3437.