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Volumn 15, Issue 3, 1998, Pages 236-250

Genomics and polymorphism of Agph-DAB1, an Mhc class II B gene in red- winged blackbirds (Agelaius phoeniceus)

Author keywords

Balancing selection; Birds; Gene conversion; Introns; Major histocompatibility complex; Pseudogene

Indexed keywords

MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 2;

EID: 0031938882     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025921     Document Type: Article
Times cited : (72)

References (95)
  • 1
    • 0025845071 scopus 로고
    • Concerted evolution in a segment of the first domain exon polymorphic MHC class II beta loci
    • ANDERSSON, L., K. GUSTAFSSON, A. K. JONSSON, and L. RASK. 1991. Concerted evolution in a segment of the first domain exon polymorphic MHC class II beta loci. Immunogenetics 33:235-332.
    • (1991) Immunogenetics , vol.33 , pp. 235-332
    • Andersson, L.1    Gustafsson, K.2    Jonsson, A.K.3    Rask, L.4
  • 2
    • 0028987614 scopus 로고
    • Generation of MHC class II diversity by intra- and intergenic recombination
    • ANDERSSON, L., and S. MIKKO. 1995. Generation of MHC class II diversity by intra- and intergenic recombination. Immunol. Rev. 143:5-12.
    • (1995) Immunol. Rev. , vol.143 , pp. 5-12
    • Andersson, L.1    Mikko, S.2
  • 3
    • 0026665591 scopus 로고
    • Two new HLA DRB1 alleles found in African Americans: Implications for balancing selection at positions 57 and 86
    • APPLE, R. J., and H. A. ERLICH. 1992. Two new HLA DRB1 alleles found in African Americans: implications for balancing selection at positions 57 and 86. Tissue Antigens 40: 69-74.
    • (1992) Tissue Antigens , vol.40 , pp. 69-74
    • Apple, R.J.1    Erlich, H.A.2
  • 4
    • 0000627232 scopus 로고
    • Phylogeographic population structure of red-winged blackbirds assessed by mitochondrial DNA
    • BALL, R. M. JR., S. FREEMAN, F. C. JAMES, E. BERMINGHAM, and J. C. AVISE. 1988. Phylogeographic population structure of red-winged blackbirds assessed by mitochondrial DNA. Proc. Natl. Acad. Sci. USA 85:1558-1562.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 1558-1562
    • Ball Jr., R.M.1    Freeman, S.2    James, F.C.3    Bermingham, E.4    Avise, J.C.5
  • 5
    • 0027333426 scopus 로고
    • Peptide binding to major histocompatibility complex molecules
    • BARBER, L. D., and P. PARHAM. 1993. Peptide binding to major histocompatibility complex molecules. Ann. Rev. Cell Biol. 9:163-206.
    • (1993) Ann. Rev. Cell Biol. , vol.9 , pp. 163-206
    • Barber, L.D.1    Parham, P.2
  • 6
    • 0025284049 scopus 로고
    • Characterization of the molecular defects in the mouse E and E beta q genes. Implications for the origin of MHC polymorphism
    • BEGOVICH, A. B., T. H. VU, and P. P. JONES. 1990. Characterization of the molecular defects in the mouse E and E beta q genes. Implications for the origin of MHC polymorphism. J. Immunol. 144:1957-1964.
    • (1990) J. Immunol. , vol.144 , pp. 1957-1964
    • Begovich, A.B.1    Vu, T.H.2    Jones, P.P.3
  • 7
    • 0031135337 scopus 로고    scopus 로고
    • Recombinant DNA sequences generated by PCR amplification
    • BRADLEY, R. D., and D. M. HILLIS. 1997. Recombinant DNA sequences generated by PCR amplification. Mol. Biol. Evol. 14:592-593.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 592-593
    • Bradley, R.D.1    Hillis, D.M.2
  • 9
    • 0029875373 scopus 로고    scopus 로고
    • Structure and organization of pig MHC class II DRB genes: Evidence for genetic exchange between loci
    • BRUNSBERG, U., I. EDFORS-LILJA, L. ANDERSSON, and K. GUSTAFSSON. 1996. Structure and organization of pig MHC class II DRB genes: evidence for genetic exchange between loci. Immunogenetics 44:1-8.
    • (1996) Immunogenetics , vol.44 , pp. 1-8
    • Brunsberg, U.1    Edfors-Lilja, I.2    Andersson, L.3    Gustafsson, K.4
  • 10
    • 0025941139 scopus 로고
    • The selection-mutation-drift theory of synonymous codon usage
    • BULMER, M. 1991. The selection-mutation-drift theory of synonymous codon usage. Genetics 129:897-907.
    • (1991) Genetics , vol.129 , pp. 897-907
    • Bulmer, M.1
  • 12
    • 0027731393 scopus 로고
    • Evolution of genetic redundancy for advanced players
    • DOVER, G. A. 1993. Evolution of genetic redundancy for advanced players. Curr. Opin. Genet. Dev. 3:902-910.
    • (1993) Curr. Opin. Genet. Dev. , vol.3 , pp. 902-910
    • Dover, G.A.1
  • 13
    • 0025121213 scopus 로고
    • Independent gene evolution in the potato actin gene family demonstrated by phylogenetic procedures for resolving gene conversions and the phylogeny of angiosperm actin genes
    • DROUIN, G., and G. A. DOVER. 1990. Independent gene evolution in the potato actin gene family demonstrated by phylogenetic procedures for resolving gene conversions and the phylogeny of angiosperm actin genes. J. Mol. Evol. 31:132-150.
    • (1990) J. Mol. Evol. , vol.31 , pp. 132-150
    • Drouin, G.1    Dover, G.A.2
  • 14
    • 85036600173 scopus 로고    scopus 로고
    • Short and long term evoluton of Mhc class II B genes in birds: First glimpses
    • M. NEI and N. TAKAHATA, eds. Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park, and the Graduate School for Advanced Studies, Hayama, Japan
    • EDWARDS, S. V. 1996. Short and long term evoluton of Mhc class II B genes in birds: first glimpses. Pp. 169-178 in M. NEI and N. TAKAHATA, eds. Current topics on molecular evolution. Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park, and the Graduate School for Advanced Studies, Hayama, Japan.
    • (1996) Current Topics on Molecular Evolution , pp. 169-178
    • Edwards, S.V.1
  • 15
    • 0030979507 scopus 로고    scopus 로고
    • Ancestral polymorphism of Mhc class II genes in mice: Implications for balancing selection and the mammalian molecular clock
    • EDWARDS, S. V., K. CHESTNUT, Y. SATTA, and E. K. WAKELAND. 1997. Ancestral polymorphism of Mhc class II genes in mice: implications for balancing selection and the mammalian molecular clock. Genetics 146:655-668.
    • (1997) Genetics , vol.146 , pp. 655-668
    • Edwards, S.V.1    Chestnut, K.2    Satta, Y.3    Wakeland, E.K.4
  • 16
    • 0029583058 scopus 로고
    • Dynamics of Mhc evolution in birds and crocodilians: Amplification of class II genes with degenerate primers
    • EDWARDS, S. V., M. GRAHN, and W. K. POTTS. 1995. Dynamics of Mhc evolution in birds and crocodilians: amplification of class II genes with degenerate primers. Mol. Ecol. 4:719-729.
    • (1995) Mol. Ecol. , vol.4 , pp. 719-729
    • Edwards, S.V.1    Grahn, M.2    Potts, W.K.3
  • 17
    • 0000754999 scopus 로고    scopus 로고
    • Polymorphism of genes in the major histocompatibility complex: Implications for conservation genetics of vertebrates
    • T. B. SMITH and R. K. WAYNE, eds. Oxford University Press, Oxford
    • EDWARDS, S. V., and W. K. POTTS. 1996. Polymorphism of genes in the major histocompatibility complex: implications for conservation genetics of vertebrates. Pp. 214-237 in T. B. SMITH and R. K. WAYNE, eds. Molecular genetic approaches in conservation. Oxford University Press, Oxford.
    • (1996) Molecular Genetic Approaches in Conservation , pp. 214-237
    • Edwards, S.V.1    Potts, W.K.2
  • 18
    • 0029557243 scopus 로고
    • Contrasting histories of avian and mammalian Mhc genes revealed by class II B sequences from songbirds
    • EDWARDS, S. V., E. K. WAKELAND, and W. K. POTTS. 1995. Contrasting histories of avian and mammalian Mhc genes revealed by class II B sequences from songbirds. Proc. Natl. Acad. Sci. USA 92:12200-12204.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 12200-12204
    • Edwards, S.V.1    Wakeland, E.K.2    Potts, W.K.3
  • 19
    • 0026095133 scopus 로고
    • Shared epitopes among HLA class II alleles: Gene conversion, common ancestry and balancing selection
    • ERLICH, H. A., and U. B. GYLLENSTEN. 1991. Shared epitopes among HLA class II alleles: gene conversion, common ancestry and balancing selection. Immunol. Today 12:411-414.
    • (1991) Immunol. Today , vol.12 , pp. 411-414
    • Erlich, H.A.1    Gyllensten, U.B.2
  • 20
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 21
    • 0026682501 scopus 로고
    • Estimating effective population size from samples of sequences: Inefficiency of pairwise and segregating sites as compared to phylogenetic estimates
    • _. 1992. Estimating effective population size from samples of sequences: inefficiency of pairwise and segregating sites as compared to phylogenetic estimates. Genet. Res. 59: 139-147.
    • (1992) Genet. Res. , vol.59 , pp. 139-147
  • 22
    • 0003437299 scopus 로고
    • Distributed by the author, Department of Genetics, University of Washington, Seattle
    • _. 1994. Phylogeny inference package (PHYLIP). Version 3.6. Distributed by the author, Department of Genetics, University of Washington, Seattle.
    • (1994) Phylogeny Inference Package (PHYLIP). Version 3.6
  • 23
    • 0028181895 scopus 로고
    • The origin of the primate Mhc-DRB genes and allelic lineages deduced from the study of prosimians
    • FIGUEROA, F., C. O'HUIGIN, H. TICHY, and J. KLEIN. 1994. The origin of the primate Mhc-DRB genes and allelic lineages deduced from the study of prosimians. J. Immunol. 152: 4455-4465.
    • (1994) J. Immunol. , vol.152 , pp. 4455-4465
    • Figueroa, F.1    O'Huigin, C.2    Tichy, H.3    Klein, J.4
  • 24
    • 0027442896 scopus 로고
    • A novel type of class I gene organization in vertebrates: A large family of non-MHC-linked class I genes is expressed at the RNA level in the amphibian Xenopus
    • FLAJNIK, M. F., M. KASAHARA, B. P. SHUM, L. SALTER-CID, E. TAYLOR, and L. DU PASQUIER. 1993. A novel type of class I gene organization in vertebrates: a large family of non-MHC-linked class I genes is expressed at the RNA level in the amphibian Xenopus. EMBO J. 12:4385-4396.
    • (1993) EMBO J. , vol.12 , pp. 4385-4396
    • Flajnik, M.F.1    Kasahara, M.2    Shum, B.P.3    Salter-Cid, L.4    Taylor, E.5    Du Pasquier, L.6
  • 25
    • 0027468145 scopus 로고
    • The biochemistry and cell biology of antigen processing and presentation
    • GERMAIN, R. N., and D. H. MARGULIES. 1993. The biochemistry and cell biology of antigen processing and presentation. Annu. Rev. Immunol. 11:403-450.
    • (1993) Annu. Rev. Immunol. , vol.11 , pp. 403-450
    • Germain, R.N.1    Margulies, D.H.2
  • 26
    • 0025829099 scopus 로고
    • Detection of a hypervariable DNA locus in birds by hybridization with a mouse MHC probe
    • GIBBS, H., P. BOAG, B. WHITE, P. WEATHERHEAD, and L. TABAK. 1991. Detection of a hypervariable DNA locus in birds by hybridization with a mouse MHC probe. Mol. Biol. Evol. 8:433-446.
    • (1991) Mol. Biol. Evol. , vol.8 , pp. 433-446
    • Gibbs, H.1    Boag, P.2    White, B.3    Weatherhead, P.4    Tabak, L.5
  • 27
    • 0029939769 scopus 로고    scopus 로고
    • Trans-species polymorphism of class II Mhc loci in danio fishes
    • GRASER, R., C. O'HUIGIN, V. VINCEK, A. MEYER, and J. KLEIN. 1996. Trans-species polymorphism of class II Mhc loci in danio fishes. Immunogenetics 44:36-48.
    • (1996) Immunogenetics , vol.44 , pp. 36-48
    • Graser, R.1    O'Huigin, C.2    Vincek, V.3    Meyer, A.4    Klein, J.5
  • 28
    • 0031041347 scopus 로고    scopus 로고
    • A likelihood method for the detection of selection and recombination using nucleotide sequences
    • GRASSLY, N. C., and E. C. HOLMES. 1997. A likelihood method for the detection of selection and recombination using nucleotide sequences. Mol. Biol. Evol. 14:239-247.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 239-247
    • Grassly, N.C.1    Holmes, E.C.2
  • 29
    • 0007597735 scopus 로고
    • A phylogenetic investigation of MHC class II DRB reveals convergent evolution in the antigen binding site
    • J. KLEIN and D. KLEIN, eds. Springer Verlag, Heidelberg
    • GUSTAFFSON, K., U. BRUNSBERG, S. SIGURDARDOTTIR, and L. ANDERSSON. 1991. A phylogenetic investigation of MHC class II DRB reveals convergent evolution in the antigen binding site. Pp. 119-130 in J. KLEIN and D. KLEIN, eds. Molecular evolution of the major histocompatibility complex. Springer Verlag, Heidelberg.
    • (1991) Molecular Evolution of the Major Histocompatibility Complex , pp. 119-130
    • Gustaffson, K.1    Brunsberg, U.2    Sigurdardottir, S.3    Andersson, L.4
  • 30
    • 0025219394 scopus 로고
    • Allelic diversification at the class II DQB locus of the mammalian major histocompatibility complex
    • GYLLENSTEN, U. B., D. LASHKARI, and H. A. ERLICH. 1990. Allelic diversification at the class II DQB locus of the mammalian major histocompatibility complex. Proc. Natl. Acad. Sci. USA 87:1835-1839.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 1835-1839
    • Gyllensten, U.B.1    Lashkari, D.2    Erlich, H.A.3
  • 31
    • 0025859455 scopus 로고
    • Allelic diversity is generated by intra-exon exchange at the DRB locus of primates
    • GYLLENSTEN, U., M. SUNDVALL, and H. ERLICH. 1991. Allelic diversity is generated by intra-exon exchange at the DRB locus of primates. Proc. Natl. Acad. Sci. USA 88:3686-3690.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 3686-3690
    • Gyllensten, U.1    Sundvall, M.2    Erlich, H.3
  • 32
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • HASEGAWA, M., H. KISHINO, and T. YANO. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 21:160-174.
    • (1985) J. Mol. Evol. , vol.21 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 33
    • 0028028910 scopus 로고
    • Evolutionary genetics of the major histocompatibility complex
    • HEDRICK, P. W. 1994. Evolutionary genetics of the major histocompatibility complex. Am. Nat. 143:945-964.
    • (1994) Am. Nat. , vol.143 , pp. 945-964
    • Hedrick, P.W.1
  • 34
    • 0000686490 scopus 로고    scopus 로고
    • Genetics of complex polymorphisms: Parasites and maintenance of MHC variation
    • R. S. SINGH and C. K. KRIMBAS, eds. Harvard University Press, Cambridge, Mass. (in press)
    • HEDRICK, P. W., and T. J. KIM. 1998. Genetics of complex polymorphisms: parasites and maintenance of MHC variation. In R. S. SINGH and C. K. KRIMBAS, eds. Genetics, Evolution, and Society. Harvard University Press, Cambridge, Mass. (in press).
    • (1998) Genetics, Evolution, and Society
    • Hedrick, P.W.1    Kim, T.J.2
  • 35
    • 0028187336 scopus 로고
    • Rare alleles, MHC and captive breeding
    • V. LOESCHCKE, J. TOMIUK, and S. K. JAIN, eds. Birkhauser, Basel, Switzerland
    • HEDRICK, P. W., and P. S. MILLER. 1995. Rare alleles, MHC and captive breeding. Pp. 187-204 in V. LOESCHCKE, J. TOMIUK, and S. K. JAIN, eds. Conservation genetics. Birkhauser, Basel, Switzerland.
    • (1995) Conservation Genetics , pp. 187-204
    • Hedrick, P.W.1    Miller, P.S.2
  • 36
    • 0020961177 scopus 로고
    • Evidence for balancing selection at HLA
    • HEDRICK, P. W., and G. THOMSON. 1983. Evidence for balancing selection at HLA. Genetics 104:449-456.
    • (1983) Genetics , vol.104 , pp. 449-456
    • Hedrick, P.W.1    Thomson, G.2
  • 37
    • 0026471097 scopus 로고
    • Molecular analysis of the association of HLA-B53 and resistance to severe malaria
    • 12 co-authors
    • HILL, A. V., J. ELVIN, A. C. WILLIS et al. (12 co-authors). 1992. Molecular analysis of the association of HLA-B53 and resistance to severe malaria. Nature 360:434-439.
    • (1992) Nature , vol.360 , pp. 434-439
    • Hill, A.V.1    Elvin, J.2    Willis, A.C.3
  • 38
    • 0001935493 scopus 로고
    • Gene genealogies and the coalescent process
    • HUDSON, R. R. 1990. Gene genealogies and the coalescent process. Oxf. Surv. Evol. Biol. 7:1-44.
    • (1990) Oxf. Surv. Evol. Biol. , vol.7 , pp. 1-44
    • Hudson, R.R.1
  • 39
    • 0029100668 scopus 로고
    • Small genomes for better flyers
    • HUGHES, A. L. 1995. Small genomes for better flyers. Nature 377:391.
    • (1995) Nature , vol.377 , pp. 391
    • Hughes, A.L.1
  • 40
    • 0040771786 scopus 로고
    • Nucleotide substitution at major histocompatibility complex class II loci: Evidence for overdominant selection
    • HUGHES, A. L., and M. NEI. 1989. Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection. Proc. Natl. Acad. Sci. USA 86: 958-962.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 958-962
    • Hughes, A.L.1    Nei, M.2
  • 41
    • 0008300336 scopus 로고
    • DNA polymorphisms shared among different loci of the major histocompatibility complex genes
    • M. NEI and N. TAKAHATA, eds. Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park, and the Graduate School for Advanced Studies, Hayama, Japan
    • IMANISHI, T. 1995. DNA polymorphisms shared among different loci of the major histocompatibility complex genes. Pp. 89-95 in M. NEI and N. TAKAHATA, eds. Current topics on molecular evolution. Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park, and the Graduate School for Advanced Studies, Hayama, Japan.
    • (1995) Current Topics on Molecular Evolution , pp. 89-95
    • Imanishi, T.1
  • 42
    • 0026699256 scopus 로고
    • Patterns of nucleotide substitutions inferred from the phylogenies of the class I major histocompatibility complex genes
    • IMANISHI, T., and T. GOJOBORI. 1992. Patterns of nucleotide substitutions inferred from the phylogenies of the class I major histocompatibility complex genes. J. Mol. Evol. 35: 196-204.
    • (1992) J. Mol. Evol. , vol.35 , pp. 196-204
    • Imanishi, T.1    Gojobori, T.2
  • 43
    • 0028987604 scopus 로고
    • A "minimal essential Mhc" and an "unrecognized" Mhc: Two extremes in selection for polymorphism
    • KAUFMAN, J. 1995. A "minimal essential Mhc" and an "unrecognized" Mhc: two extremes in selection for polymorphism. Immunol. Rev. 143:63-88.
    • (1995) Immunol. Rev. , vol.143 , pp. 63-88
    • Kaufman, J.1
  • 44
    • 0028702002 scopus 로고
    • Evolutionary conservation of MHC class I and class II molecules - Different yet the same
    • KAUFMAN, J., J. SALOMONSEN, and M. FLAJNIK. 1994. Evolutionary conservation of MHC class I and class II molecules - different yet the same. Semin. Immunol. 6:411-424.
    • (1994) Semin. Immunol. , vol.6 , pp. 411-424
    • Kaufman, J.1    Salomonsen, J.2    Flajnik, M.3
  • 48
    • 0027737970 scopus 로고
    • Composite origin of major histocompatibility complex genes
    • KLEIN, J., and C. O'HUIGIN. 1993. Composite origin of major histocompatibility complex genes. Curr. Opin. Genet. Dev. 3:923-930.
    • (1993) Curr. Opin. Genet. Dev. , vol.3 , pp. 923-930
    • Klein, J.1    O'Huigin, C.2
  • 49
    • 0027450353 scopus 로고
    • The molecular descent of the major histocompatibility complex
    • KLEIN, J., Y. SATTA, and C. O'HUIGIN. 1993. The molecular descent of the major histocompatibility complex. Annu. Rev. Immunol. 11:269-295.
    • (1993) Annu. Rev. Immunol. , vol.11 , pp. 269-295
    • Klein, J.1    Satta, Y.2    O'Huigin, C.3
  • 52
    • 0026566327 scopus 로고
    • Elimination of heteroduplex artifacts when sequencing HLA genes amplified by polymerase chain reaction (PCR)
    • L'ABBE, D., A. BELMAAZA, F. DECARY, and P. CHARTRAND. 1992. Elimination of heteroduplex artifacts when sequencing HLA genes amplified by polymerase chain reaction (PCR). Immunogenetics 35:395-397.
    • (1992) Immunogenetics , vol.35 , pp. 395-397
    • L'Abbe, D.1    Belmaaza, A.2    Decary, F.3    Chartrand, P.4
  • 53
    • 0000655107 scopus 로고
    • Polyphyly of the blackbird genus Agelaius and the importance of monophyly in comparative studies
    • LANYON, S. M. 1994. Polyphyly of the blackbird genus Agelaius and the importance of monophyly in comparative studies. Evolution 48:679-693.
    • (1994) Evolution , vol.48 , pp. 679-693
    • Lanyon, S.M.1
  • 54
    • 0027403961 scopus 로고
    • Unbiased estimation of the rates of synonymous and non-synonymous substitution
    • LI, W.-H. 1993. Unbiased estimation of the rates of synonymous and non-synonymous substitution. J. Mol. Evol. 36: 96-99.
    • (1993) J. Mol. Evol. , vol.36 , pp. 96-99
    • Li, W.-H.1
  • 56
    • 0025763426 scopus 로고
    • Avian B-cell development: Generation of an immunoglobulin repertoire by gene conversion
    • MCCORMACK, W. T., L. W. TJOELKER, and C. B. THOMPSON. 1991. Avian B-cell development: generation of an immunoglobulin repertoire by gene conversion. Annu. Rev. Immunol. 9:219-241.
    • (1991) Annu. Rev. Immunol. , vol.9 , pp. 219-241
    • Mccormack, W.T.1    Tjoelker, L.W.2    Thompson, C.B.3
  • 58
    • 0029924137 scopus 로고    scopus 로고
    • Assignment of Rfp-Y to the chicken major histocompatibility complex/NOR microchromosome and evidence for high-frequency recombination associated with the nucleolar organizer region
    • MILLER, M. M., R. M. GOTO, R. L. TAYLOR JR., R. ZOOROB, C. AUFFRAY, R. W. BRILES, W. E. BRILES, and S. E. BLOOM. 1996. Assignment of Rfp-Y to the chicken major histocompatibility complex/NOR microchromosome and evidence for high-frequency recombination associated with the nucleolar organizer region. Proc. Natl. Acad. Sci. USA 93: 3958-3962.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 3958-3962
    • Miller, M.M.1    Goto, R.M.2    Taylor Jr., R.L.3    Zoorob, R.4    Auffray, C.5    Briles, R.W.6    Briles, W.E.7    Bloom, S.E.8
  • 59
    • 0029027330 scopus 로고
    • Sequence variation at the major histocompatibility complex locus DQβ in Beluga whales
    • MURRAY, B. W., S. MALIK, and B. N. WHITE. 1995. Sequence variation at the major histocompatibility complex locus DQβ in Beluga whales. Mol. Biol. Evol. 12:582-593.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 582-593
    • Murray, B.W.1    Malik, S.2    White, B.N.3
  • 60
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • NEI, M., and T GOJOBORI. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3:418-426.
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 61
    • 0002973323 scopus 로고
    • Balanced polymorphism and evolution by the birth-and-death process in the MHC loci
    • K. TSUJI, M. AIZAWA, and T. SASAZUKI, eds. Oxford University Press, Oxford
    • NEI, M., and A. L. HUGHES. 1992. Balanced polymorphism and evolution by the birth-and-death process in the MHC loci. Pp. 27-38 in K. TSUJI, M. AIZAWA, and T. SASAZUKI, eds. Proceedings of the 11th histocompatibility workshop and conference. Oxford University Press, Oxford.
    • (1992) Proceedings of the 11th Histocompatibility Workshop and Conference , pp. 27-38
    • Nei, M.1    Hughes, A.L.2
  • 62
    • 0001991181 scopus 로고
    • Red-winged blackbirds
    • I. NEWTON, ed. Academic Press, New York
    • ORIANS, G. H., and L. D. BELETSKY. 1989. Red-winged blackbirds. Pp. 183-197 in I. NEWTON, ed. Lifetime reproduction in birds. Academic Press, New York.
    • (1989) Lifetime Reproduction in Birds , pp. 183-197
    • Orians, G.H.1    Beletsky, L.D.2
  • 63
    • 0028980489 scopus 로고
    • Evolution of immunoglobulin VH pseudogenes in chickens
    • OTA, T., and M. NEI. 1995. Evolution of immunoglobulin VH pseudogenes in chickens. Mol. Biol. Evol. 12:94-102.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 94-102
    • Ota, T.1    Nei, M.2
  • 64
    • 0029842816 scopus 로고    scopus 로고
    • Variation and evolution of class I Mhc in sexual and parthenogenetic geckos
    • RADTKEY, R. R., B. BECKER, R. D. MILLER, R. RIBLET, and T. J. CASE. 1996. Variation and evolution of class I Mhc in sexual and parthenogenetic geckos. Proc. R. Soc. Lond. B 263:1023-1032.
    • (1996) Proc. R. Soc. Lond. B , vol.263 , pp. 1023-1032
    • Radtkey, R.R.1    Becker, B.2    Miller, R.D.3    Riblet, R.4    Case, T.J.5
  • 65
    • 0023652339 scopus 로고
    • A hyperconversion mechanism generates the chicken light chain preimmune repertoire
    • REYNAUD, C.-A., V. ANQUEZ, H. GRIMAL, and J.-C. WEILL. 1987. A hyperconversion mechanism generates the chicken light chain preimmune repertoire. Cell 48:379-388.
    • (1987) Cell , vol.48 , pp. 379-388
    • Reynaud, C.-A.1    Anquez, V.2    Grimal, H.3    Weill, J.-C.4
  • 66
    • 0029671440 scopus 로고    scopus 로고
    • The chicken beta 2-microglobulin gene is located on a non-major histocompatibility complex microchromosome: A small, G+C-rich gene with X and Y boxes in the promoter
    • 12 co-authors
    • RIEGERT, P., R. ANDERSEN, N. BUMSTEAD et al. (12 co-authors). 1996. The chicken beta 2-microglobulin gene is located on a non-major histocompatibility complex microchromosome: a small, G+C-rich gene with X and Y boxes in the promoter. Proc. Natl. Acad. Sci. USA 93:1243-1248.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 1243-1248
    • Riegert, P.1    Andersen, R.2    Bumstead, N.3
  • 67
    • 0022195841 scopus 로고
    • Complete structure of a rat RT1 E beta chain extensive conservation of MHC class II beta chains
    • ROBERTSON, K. A., and W. R. MCMASTER. 1985. Complete structure of a rat RT1 E beta chain extensive conservation of MHC class II beta chains. J. Immunol. 135:4095-4099.
    • (1985) J. Immunol. , vol.135 , pp. 4095-4099
    • Robertson, K.A.1    Mcmaster, W.R.2
  • 68
    • 0029659225 scopus 로고    scopus 로고
    • Body size and harem size in male red-winged blackbirds: Manipulating selection with sex-specific feeders
    • ROHWER, S., N. LANGSTON, and D. GORI. 1996. Body size and harem size in male red-winged blackbirds: manipulating selection with sex-specific feeders. Evolution 50:2049-2065.
    • (1996) Evolution , vol.50 , pp. 2049-2065
    • Rohwer, S.1    Langston, N.2    Gori, D.3
  • 69
    • 0030017526 scopus 로고    scopus 로고
    • The complete 685-kilobase DNA sequence of the human β T cell receptor locus
    • ROWEN, L., B. KOOP, and L. HOOD. 1996. The complete 685-kilobase DNA sequence of the human β T cell receptor locus. Science 272:1755-1762.
    • (1996) Science , vol.272 , pp. 1755-1762
    • Rowen, L.1    Koop, B.2    Hood, L.3
  • 70
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N., and M. NEI. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 71
    • 0031046439 scopus 로고    scopus 로고
    • Isolation of class I cDNAs from the axolotl Ambystoma mexicanum
    • SAMMUT, B., V. LAURENS, and A. TOURNEFIER. 1997. Isolation of class I cDNAs from the axolotl Ambystoma mexicanum. Immunogenetics 45:285-294.
    • (1997) Immunogenetics , vol.45 , pp. 285-294
    • Sammut, B.1    Laurens, V.2    Tournefier, A.3
  • 72
    • 0029656185 scopus 로고    scopus 로고
    • Identification of major histocompatibility complex genes in the guppy, Poecilia reticulata
    • SATO, A., F. FIGUEROA, C. O'HUIGIN, D. N. REZNICK, and J. KLEIN. 1996. Identification of major histocompatibility complex genes in the guppy, Poecilia reticulata. Immunogenetics 43:38-39.
    • (1996) Immunogenetics , vol.43 , pp. 38-39
    • Sato, A.1    Figueroa, F.2    O'Huigin, C.3    Reznick, D.N.4    Klein, J.5
  • 73
    • 0027275349 scopus 로고
    • The synonymous substitution rate at major histocompatibility complex loci in primates
    • SATTA, Y., C. O'HUIGIN, N. TAKAHATA, and J. KLEIN. 1993. The synonymous substitution rate at major histocompatibility complex loci in primates. Proc. Natl. Acad. Sci. USA 90:7480-7484.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 7480-7484
    • Satta, Y.1    O'Huigin, C.2    Takahata, N.3    Klein, J.4
  • 74
    • 0028361982 scopus 로고
    • Intensity of natural selection at the major histocompatibility complex loci
    • _. 1994. Intensity of natural selection at the major histocompatibility complex loci. Proc. Natl. Acad. Sci. USA 91:7184-7188.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 7184-7188
  • 77
    • 0026022656 scopus 로고
    • Amplification of MHC class II gene polymorphism by intra-exonic recombination
    • _. 1991. Amplification of MHC class II gene polymorphism by intra-exonic recombination. Proc. Natl. Acad. Sci. USA 88:453-457.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 453-457
  • 78
    • 0030456227 scopus 로고    scopus 로고
    • Ecological immunology: Costly parasite defences and trade-offs in evolutionary ecology
    • SHELDON, B. C. and S. VERHULST. 1996. Ecological immunology: costly parasite defences and trade-offs in evolutionary ecology. Trends Ecol. Evol. 11:317-321.
    • (1996) Trends Ecol. Evol. , vol.11 , pp. 317-321
    • Sheldon, B.C.1    Verhulst, S.2
  • 79
    • 0029047062 scopus 로고
    • Isolation and characterization of cDNA clones for Japanese quail (Coturnix japonica) major histocompatibility complex (MhcCoja) class I molecules
    • SHIINA, T., A. ANDO, T. IMANISHI, H. KAWATA, K. HANZAWA, T. GOJOBORI, H. INOKO, and S. WATANABE. 1995. Isolation and characterization of cDNA clones for Japanese quail (Coturnix japonica) major histocompatibility complex (MhcCoja) class I molecules. Immunogenetics 42:213-216.
    • (1995) Immunogenetics , vol.42 , pp. 213-216
    • Shiina, T.1    Ando, A.2    Imanishi, T.3    Kawata, H.4    Hanzawa, K.5    Gojobori, T.6    Inoko, H.7    Watanabe, S.8
  • 80
    • 0025366147 scopus 로고
    • A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism
    • TAKAHATA, N. 1990. A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism. Proc. Natl. Acad. Sci. USA 87:2419-2423.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2419-2423
    • Takahata, N.1
  • 81
    • 0028366181 scopus 로고
    • Comments on the detection of reciprocal recombination or gene conversion
    • _. 1994. Comments on the detection of reciprocal recombination or gene conversion. Immunogenetics 39:146-149.
    • (1994) Immunogenetics , vol.39 , pp. 146-149
  • 82
    • 0025255468 scopus 로고
    • Overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci
    • TAKAHATA, N., and M. NEI. 1990. Overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. Genetics 124:967-978.
    • (1990) Genetics , vol.124 , pp. 967-978
    • Takahata, N.1    Nei, M.2
  • 83
    • 0026711015 scopus 로고
    • Polymorphism and balancing selection at major histocompatibility complex loci
    • TAKAHATA, N., Y. SATTA, and J. KLEIN. 1992. Polymorphism and balancing selection at major histocompatibility complex loci. Genetics 130:925-938.
    • (1992) Genetics , vol.130 , pp. 925-938
    • Takahata, N.1    Satta, Y.2    Klein, J.3
  • 84
    • 0029100727 scopus 로고
    • Phylogenetic test of the molecular clock and linearized trees
    • TAKEZAKI, N., A. RZHETSKY, and M. NEI. 1995. Phylogenetic test of the molecular clock and linearized trees. Mol. Biol. Evol. 12:823-833.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 823-833
    • Takezaki, N.1    Rzhetsky, A.2    Nei, M.3
  • 85
    • 0028988470 scopus 로고
    • 'Both bird and man and beast': Comparative organization of MHC genes
    • TROWSDALE, J. 1995. 'Both bird and man and beast': comparative organization of MHC genes. Immunogenetics 41:1-17.
    • (1995) Immunogenetics , vol.41 , pp. 1-17
    • Trowsdale, J.1
  • 86
    • 0029146228 scopus 로고
    • Molecular cloning of major histocompatibility complex class II B gene cDNA from the Bengalese finch Lonchura striata
    • VINCEK, V., D. KLEIN, R. T. GRASER, F. FIGUEROA, C. O'HUIGIN, and J. KLEIN. 1995. Molecular cloning of major histocompatibility complex class II B gene cDNA from the Bengalese finch Lonchura striata. Immunogenetics 42:262-267.
    • (1995) Immunogenetics , vol.42 , pp. 262-267
    • Vincek, V.1    Klein, D.2    Graser, R.T.3    Figueroa, F.4    O'Huigin, C.5    Klein, J.6
  • 88
    • 0025684064 scopus 로고
    • Secondary sexual traits, parasites, and polygyny in red-winged blackbirds, Agelaius phoenicus
    • WEATHERHEAD, P. J. 1990. Secondary sexual traits, parasites, and polygyny in red-winged blackbirds, Agelaius phoenicus. Behav. Ecol. 1:125-130.
    • (1990) Behav. Ecol. , vol.1 , pp. 125-130
    • Weatherhead, P.J.1
  • 89
    • 0026331809 scopus 로고
    • Ecology of red-winged blackbird parasitism by haematozoa
    • WEATHERHEAD, P. J., and G. F. BENNETT. 1991. Ecology of red-winged blackbird parasitism by haematozoa. Can. J. Zool. 69:2352-2359.
    • (1991) Can. J. Zool. , vol.69 , pp. 2352-2359
    • Weatherhead, P.J.1    Bennett, G.F.2
  • 90
    • 0028162882 scopus 로고
    • Natural selection and sexual size dimorphism in red-winged blackbirds
    • WEATHERHEAD, P. J., and R. G. CLARK. 1994. Natural selection and sexual size dimorphism in red-winged blackbirds. Evolution 48:1071-1080.
    • (1994) Evolution , vol.48 , pp. 1071-1080
    • Weatherhead, P.J.1    Clark, R.G.2
  • 91
    • 0026779971 scopus 로고
    • Nucleotide sequence analysis of 95 kb near the 3′ end of the murine T-cell receptor α/δ chain locus: Strategy and methodology
    • WILSON, R. K., B. F. KOOP, C. CHEN, N. HALLORAN, R. SCIAMMIS, and L. HOOD. 1992. Nucleotide sequence analysis of 95 kb near the 3′ end of the murine T-cell receptor α/δ chain locus: strategy and methodology. Genomics 13:1198-1208.
    • (1992) Genomics , vol.13 , pp. 1198-1208
    • Wilson, R.K.1    Koop, B.F.2    Chen, C.3    Halloran, N.4    Sciammis, R.5    Hood, L.6
  • 92
    • 0028176353 scopus 로고
    • Molecular characterization of three Mhc class II B haplotypes in the ring-necked pheasant
    • WITTZELL, H., T. VON SHANTZ, R. ZOOROB, and C. AUFFREY. 1994. Molecular characterization of three Mhc class II B haplotypes in the ring-necked pheasant. Immunogenetics 39:395-403.
    • (1994) Immunogenetics , vol.39 , pp. 395-403
    • Wittzell, H.1    Von Shantz, T.2    Zoorob, R.3    Auffrey, C.4
  • 94
    • 0025210143 scopus 로고
    • Organization of a functional chicken class II B gene
    • ZOOROB, R., G. BEHAR, G. KROEMER, and C. AUFFREY. 1990. Organization of a functional chicken class II B gene. Immunogenetics 31:179-187.
    • (1990) Immunogenetics , vol.31 , pp. 179-187
    • Zoorob, R.1    Behar, G.2    Kroemer, G.3    Auffrey, C.4
  • 95
    • 0027414306 scopus 로고
    • Chicken major histocompatibility complex class II B genes: Analysis of interallelic and interlocus sequence variance
    • ZOOROB, R., A. BERNOT, D. M. RENOIR, F. CHOUKRI, and C. AUFFREY. 1993. Chicken major histocompatibility complex class II B genes: analysis of interallelic and interlocus sequence variance. Eur. J. Immunol. 23:1139-1145.
    • (1993) Eur. J. Immunol. , vol.23 , pp. 1139-1145
    • Zoorob, R.1    Bernot, A.2    Renoir, D.M.3    Choukri, F.4    Auffrey, C.5


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