A reliable amplification technique for the characterization of genomic DNA sequences flanking insertion sequences

FEMS Microbiology Letters

Volumn 158, Issue 1, 1998, Pages 75-81

  Prod'hom, Guy ^a   Lagier, Béatrice ^b   Pelicic, Vladimir ^a   Hance, Allan J ^b   Gicquel, Brigitte ^a   Guilhot, Christophe ^a  

^a INSTITUT PASTEUR   (France)

^b INSERM   (France)

Author keywords

Cloning; Insertion sequence; Mycobacterium; Transposon mutagenesis

Indexed keywords

ARTICLE; DNA SEQUENCE; GENE AMPLIFICATION; GENE INSERTION SEQUENCE; MOLECULAR CLONING; MUTAGENESIS; MYCOBACTERIUM; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; TECHNIQUE; TRANSPOSON;

MYCOBACTERIUM; POSIBACTERIA;

EID: 0031934736     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1097(97)00503-X     Document Type: Article

References (11)

1. Ochman, H., Gerber, A.S. and Hartl, D.L. (1988) Genetic applications of an inverse polymer chain reaction. Genetics 120, 621-625.
2. Mueller, P.R. and Wold, B. (1989) In vivo footprinting of a muscle specific enhancer by ligation mediated PCR. Science 246, 780-786.
3. Pfeifer, G.P., Steigerwald, S., Mueller, P.R., Wold, B. and Riggs, A.D. (1989) Genomic sequencing and methylation analysis by ligation mediated PCR. Science 246, 810-813.
4. Espelund, M. and Jakobsen, K.S. (1992) Cloning and direct sequencing of plant promoters using primer-adapter mediated PCR on DNA coupled to a magnetic solid phase. BioTechniques 13, 74-81.
5. Riley, J., Butler, R., Ogilvie, D., Finniear, R., Jenner, D., Powell, S., Anand, R., Smith, J.C. and Markham, A.F. (1990) A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones. Nucleic Acids Res. 18, 2887-2890.
6. Palittapongarnpim, P., Chomyc, S., Fanning, A. and Kunimoto, D. (1993) DNA fingerprinting of Mycobacterium tuberculosis isolates by ligation-mediated polymerase chain reaction. Nucleic Acids Res. 21, 761-762.
7. Haas, W.H., Buttler, W.R., Woodley, C.L. and Crawford, J.T. (1993) Mixed-linker polymerase chain reaction: a new method for rapid fingerprinting of isolates of the Mycobacterium tuberculosis complex. J. Clin. Microbiol. 31, 1293-1298.
8. Buttler, W.R., Haas, W.H. and Crawford, J.T. (1996) Automated DNA fingerprinting analysis of Mycobacterium tuberculosis using fluorescent detection of PCR products. J. Clin. Microbiol. 34, 1801-1803.
9. Martin, C., Timm, J., Rauzier, J., Gomez-Lus, R., Davies, J. and Gicquel, B. (1990) Transposition of an antibiotic resistance element in mycobacteria. Nature 345, 739-743.
10. Pelicic, V., Jackson, M., Reyrat, J.-M., Jacobs Jr., W.R., Gicquel, B. and Guilhot, C. (1997) Efficient allelic exchange and transposon mutagenesis in Mycobacterium tuberculosis. Proc. Natl. Acad. Sci. USA 94, 10955-10960.
11. Chou, Q., Russell, M., Birch, D.E., Raymond, J. and Bloch, W. (1992) Prevention of pre-PCR mis-priming and primer dimerization improves low-copy-number amplifications. Nucleic Acids Res. 20, 1717-1723.