Viral ribonucleoprotein complex formation and nucleolar-cytoplasmic relocalization of nucleolin in poliovirus-infected cells

Journal of Virology

Volumn 72, Issue 8, 1998, Pages 6699-6709

  Waggoner, Shelly ^a   Sarnow, Peter ^a  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOLIN; RIBONUCLEOPROTEIN;

ARTICLE; BINDING AFFINITY; GENE AMPLIFICATION; GENOME; IMMUNOFLUORESCENCE; POLIOMYELITIS VIRUS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; RNA ANALYSIS; RNA TRANSCRIPTION; RNA TRANSLATION; RNA VIRUS; VIRION; VIRUS INFECTION;

EID: 0031927035     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.72.8.6699-6709.1998     Document Type: Article

References (60)

1. Andino, R., G. E. Rieckhof, P. L. Achacosco, and D. Baltimore. 1993. Poliovirus RNA synthesis utilizes an RNP complex formed around the 5-end of viral RNA. EMBO J. 12:3587-3598.
2. Andino, R., G. E. Rieckhof, and D. Baltimore. 1990. A functional ribonucleoprotein complex forms around the 5′ end of poliovirus RNA. Cell 63:369-380.
3. Aris, J. P., and G. Blobel. 1991. cDNA cloning and sequencing of human fibrillarin, a conserved nucleolar protein recognized by autoimmune anti-sera. Proc. Natl. Acad. Sci. USA 88:931-935.
4. Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 1989. Current protocols in molecular biology. Greene Publishing Associates, Inc., John Wiley and Sons, Inc., New York, N.Y.
5. Banerjee, R., A. Echeverri, and A. Dasgupta. 1997. Poliovirus-encoded 2C polypeptide specifically binds to the 3′-terminal sequences of viral negative-strand RNA. J. Virol. 71:9570-9578.
6. Barton, D. J., E. P. Black, and J. B. Flanegan. 1995. Complete replication of poliovirus in vitro: preinitiation RNA replication complexes require soluble cellular factors for the synthesis of VPg-linked RNA. J. Virol. 69:5516-5527.
7. Barton, D. J., B. J. Morasco, and J. B. Flanegan. 1996. Assays for poliovirus polymerase, 3D(Pol), and authentic RNA replication in HeLa S10 extracts. Methods Enzymol. 275:35-57.
8. cdc2 protein kinase. Mol. Cell. Biol. 10:3607-3618.
9. Blum, H., H. Beier, and H. J. Gross. 1987. Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels. Electrophoresis 8:93-99.
10. Bonifaci, N., J. Moroianu, A. Radu, and G. Blobel. 1997. Karyopherin beta2 mediates nuclear import of a mRNA binding protein. Proc. Natl. Acad. Sci. USA 94:5055-5060.
11. Borer, R. A., C. F. Lehner, H. M. Eppenberger, and E. A. Nigg. 1989. Major nucleolar proteins shuttle between nucleus and cytoplasm. Cell 56:379-390.
12. Bugler, B., H. Bourbon, B. Lapeyre, M. O. Wallace, J. H. Chang, F. Amalric, and M. O. Olson. 1987. RNA binding fragments from nucleolin contain the ribonucleoprotein consensus sequence. J. Biol. Chem. 262:10922-10925.
13. Bugler, B., M. Caizergues-Ferrer, G. Bouche, H. Bourbon, and F. Amalric. 1982. Detection and localization of a class of proteins immunologically related to a 100-kDa nucleolar protein. Eur. J. Biochem. 128:475-480.
14. Burd, C., and G. Dreyfuss. 1994. Conserved structures and diversity of function of RNA-binding proteins. Science 265:615-621.
15. Chen, C. M., S. Y. Chiang, and N. H. Yeh. 1991. Increased stability of nucleolin in proliferating cells by inhibition of self-cleaving activity. J. Biol. Chem. 266:7754-7758.
16. Detjen, B. M., J. Lucas, and E. Wimmer. 1978. Poliovirus single-stranded RNA and double-stranded RNA: differential infectivity in enucleate cells. J. Virol. 27:582-586.
17. Deutscher, M. P. 1990. Maintaining protein stability. Methods Enzymol. 182:83-89.
18. Ehrenfeld, E. 1996. Initiation of translation by picornavirus RNAs, p. 549-573. Jn J. W. B. Hershey, M. B. Mathews, and N. Sonenberg (ed.), Translational control. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
19. Escande-Geraud, M. L., M. C. Azum, J. L. Tichadou, and N. Gas. 1985. Correlation between rDNA transcription and distribution of a 100 kD nucleolar protein in CHO cells. Exp. Cell Res. 161:353-363.
20. Fang, S. H., and N. H. Yeh. 1993. The self-cleaving activity of nucleolin determines its molecular dynamics in relation to cell proliferation. Exp. Cell Res. 208:48-53.
21. Gamarnik, A. V., and R. Andino. 1997. Two functional complexes formed by KH domain containing proteins with the 5′ noncoding region of poliovirus RNA. RNA 3:882-892.
22. Ghisolfi, L., G. Joseph, F. Amalric, and M. Erard. 1992. The glycine-rich domain of nucleolin has an unusual supersecondary structure responsible for its RNA-helix-destabilizing properties. J. Biol. Chem. 267:2955-2959.
23. Ghisolfi-Nieto, L., G. Joseph, F. Puvion-Dutilleul, F. Amalric, and P. Bouvet. 1996. Nucleolin is a sequence-specific RNA-binding protein: characterization of targets on pre-ribosomal RNA. J. Mol. Biol. 260:34-53.
24. Haller, A. A., and B. L. Semler. 1995. Translation and host cell shutoff, p. 113-133. In H. A. Rotbart (ed.), Human enterovirus infections. American Society for Microbiology, Washington, D.C.
25. Hanakahi, L. A., L. A. Dempsey, M. J. Li, and N. Maizels. 1997. Nucleolin is one component of the B cell-specific transcription factor and switch region binding protein, LR1. Proc. Natl. Acad. Sci. USA 94:3605-3610.
26. pro with the 5′ and 3′ termini of the poliovirus genome. J. Biol. Chem. 269:27004-27014.
27. Herschlag, D., M. Khosla, Z. Tsuchihashi, and R. L. Karpel. 1994. An RNA chaperone activity of non-specific RNA binding proteins in hammerhead ribozyme catalysis. EMBO J. 13:2913-2924. (Erratum, 13:3926.)
28. Jacobson, S. J., D. A. M. Konings, and P. Sarnow. 1993. Biochemical and genetic evidence for a pseudoknot structure at the 3′ terminus of the poliovirus RNA genome and its role in viral RNA amplification. J. Virol. 67:2961-2971.
29. Johnson, K. L., and P. Sarnow. 1995. Viral RNA synthesis, p. 95-112. In H. A. Rotbart (ed.), Human enterovirus infections. American Society for Microbiology, Washington, D.C.
30. Kitamura, N., B. L. Semler, P. G. Rothberg, G. R. Larsen, C. J. Adler, A. J. Dorner, E. A. Emini, R. Hanecak, J. J. Lee, S. van der Werf, C. W. Anderson, and E. Wimmer. 1981. Primary structure, gene organization, and polypeptide expression of poliovirus RNA. Nature 291:547-553.
31. Lapeyre, B., H. Bourbon, and F. Amalric. 1987. Nucleolin, the major nucleolar protein of growing eukaryotic cells: an unusual protein structure revealed by the nucleotide sequence. Proc. Natl. Acad. Sci. USA 84:1472-1476.
32. Li, D., G. Dobrowolska, and E. G. Krebs. 1996. The physical association of casein kinase 2 with nucleolin. J. Biol. Chem. 271:15662-15668.
33. McBratney, S., and P. Sarnow. 1996. Evidence for involvement of transacting factors in selection of the AUG start codon during eukaryotic translational initiation. Mol. Cell. Biol. 16:3523-3543.
34. McBride, A. E., A. Schlegel, and K. Kirkegaard. 1996. Human protein Sam68 relocalization and interaction with poliovirus RNA polymerase in infected cells. Proc. Natl. Acad. Sci. USA 93:2296-2301.
35. Medina, F. J., A. Cerdido, and M. E. Fernandez-Gomez. 1995. Components of the nucleolar processing complex (pre-rRNA, fibrillarin, and nucleolin) colocalize during mitosis and are incorporated to daughter cell nucleoli. Exp. Cell Res. 221:111-125.
36. Molla, A., A. V. Paul, and E. Wimmer. 1991. Cell-free, de novo synthesis of poliovirus. Science 254:1647-1651.
37. Ochs, R. L., M. A. Lischwe, W. H. Sphon, and H. Busch. 1985. Fibrillarin: a new protein of the nucleolus identified by autoimmune sera. Biol. Cell. 54:123-134.
38. Parsley, T. B., J. S. Towner, L. B. Blyn, E. Ehrenfeld, and B. L. Semler. 1997. Poly (rC) binding protein 2 forms a ternary complex with the 5′-terminal sequences of poliovirus RNA and the viral 3CD proteinase. RNA 3:1124-1134.
39. Pilipenko, E. V., S. V. Maslova, A. N. Sinyakov, and V. I. Agol. 1992. Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: a proposal for the existence of tRNA-like terminal structures. Nucleic Acids Res. 20:1739-1745.
40. Pilipenko, E. V., K. V. Poperechny, S. V. Maslova, W. J. G. Melchers, H. J. B. Slot, and V. I. Agol. 1997. Cis-element, oriR, involved in the initiation of (-) strand poliovirus RNA: a quasi-globular multi-domain RNA structure maintained by tertiary ("kissing") interactions. EMBO J. 15:5428-5436.
41. Racaniello, V. R., and D. Baltimore. 1981. Molecular cloning of poliovirus cDNA and determination of the complete nucleotide sequence of the viral genome. Proc. Natl. Acad. Sci. USA 78:4887-4891.
42. Roehl, H. H., T. B. Parsley, T. V. Ho, and B. L. Semler. 1997. Processing of a cellular polypeptide by 3CD proteinase is required for poliovirus ribonucleoprotein complex formation. J. Virol. 71:578-585.
43. Roehl, H. H., and B. L. Semler. 1995. Poliovirus infection enhances the formation of two ribonucleoprotein complexes at the 3′ end of viral negative-strand RNA. J. Virol. 69:2954-2961.
44. Rueckert, R. R. 1990. Picornaviridae and their replication, p. 507-548. In B. N. Fields et al. (ed.), Virology, vol. 1, 2nded. Raven Press, New York, N.Y.
45. Sarnow, P. 1989. Role of 3′-end sequences in infectivity of poliovirus transcripts made in vitro. J. Virol. 63:467-470.
46. Sarnow, P., H. D. Bernstein, and D. Baltimore. 1986. A poliovirus temperature-sensitive RNA synthesis mutant located in a noncoding region of the genome. Proc. Natl. Acad. Sci. USA 83:571-575.
47. Sarnow, P., Y. S. Ho, J. Williams, and A. J. Levine. 1982. Adenovirus E1b-58kd tumor antigen and SV40 large tumor antigen are physically associated with the same 54kd cellular protein in transformed cells. Cell 28:387-394.
48. Schlegel, A., and K. Kirkegaard. 1995. Cell biology of enterovirus infection, p. 135-153. In H. A. Rotbart (ed.), Human enterovirus infections. American Society for Microbiology, Washington, D.C.
49. Serin, G., G. Joseph, C. Faucher, L. Ghisolfi, G. Bouche, F. Amalric, and P. Bouvet. 1996. Localization of nucleolin binding sites on human and mouse pre-ribosomal RNA. Biochimie 78:530-538.
50. Srivastava, M., P. J. Fleming, H. B. Pollard, and A. L. Burns. 1989. Cloning and sequencing of the human nucleolin cDNA. FEBS Lett. 250:99-105.
51. Stade, K., J. Rinke-Appel, and R. Brimacombe. 1989. Site-directed cross-linking of mRNA analogues to the Escherichia coli ribosome; identification of 30S ribosomal components that can be cross-linked to the mRNA at various points 5′ with respect to the decoding site. Nucleic Acids Res. 23:9889-9908.
52. Todd, S., J. S. Towner, D. M. Brown, and B. L. Semler. 1997. Replication-competent picornaviruses with complete genomic RNA 3′ noncoding region deletions. J. Virol. 71:8868-8874.
53. Toyoda, H., M. Kohara, Y. Kataoka, T. Suganuma, T. Omata, N. Imura, and A. Nomoto. 1984. Complete nucleotide sequences of all three poliovirus serotype genomes: implication for genetic relationship, gene function and antigenic determinants. J. Mol. Biol. 174:561-585.
54. Tuteja, N., N. W. Huang, D. Skopac, R. Tuteja, S. Hrvatic, J. Zhang, S. Pongor, G. Joseph, C. Faucher, F. Amalric, and A. Falaschi. 1995. Human DNA helicase IV is nucleolin, an RNA helicase modulated by phosphorylation. Gene 160:143-148.
55. Waggoner, S., and P. Sarnow. Unpublished observation.
56. Wimmer, E., C. U. T. Hellen, and X. Cao. 1993. Genetics of poliovirus. Annu. Rev. Genet. 27:353-436.
57. Yaseen, N. R., and G. Blobel. 1997. Cloning and characterization of human karyopherin beta 3. Proc. Natl. Acad. Sci. USA 94:4451-4456.
58. Zaidi, S. H., R. Denman, and J. S. Malter. 1994. Multiple proteins interact at a unique cis-element in the 3′-untranslated region of amyloid precursor protein mRNA. J. Biol. Chem. 269:24000-24006.
59. Zaidi, S. H., and J. S. Malter. 1994. Amyloid precursor protein mRNA stability is controlled by a 29-base element in the 3′-untranslated region. J. Biol. Chem. 269:24007-24013.
60. Zaidi, S. H., and J. S. Malter. 1995. Nucleolin and heterogeneous nuclear ribonucleoprotein C proteins specifically interact with the 3′-untranslated region of amyloid protein precursor mRNA. J. Biol. Chem. 270:17292-17298.