A small RNA resembling the beet western yellows luteovirus ST9-associated RNA is a component of the California carrot motley dwarf complex

Phytopathology

Volumn 88, Issue 2, 1998, Pages 164-170

  Watson, Michael T ^a   Tian, Tongyan ^a   Estabrook, Elizabeth ^a   Falk, Bryce W ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Helper dependent aphid transmitted virus complex; Transcapsidation

Indexed keywords

EID: 0031914197     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO.1998.88.2.164     Document Type: Article

References (34)

1. Altschul, S. F. 1991. Amino acid substitution matrices from an information theoretic perspective. J. Mol. Biol. 219:555-565.
2. Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
3. Chin, L.-S., Foster, J., and Falk, B. W. 1993. The beet western yellows virus ST9-associated RNA shares structural and nucleotide sequence with the carmo-like viruses. Virology 192:473-482.
4. D'Arcy, C. J., Hewings, A. D., Burnett, P. A., and Jedlinski, H. 1983. Comparative purification of two luteoviruses. Phytopathology 73:755-759.
5. Dawson, W. O. 1983. Tobacco mosaic virus protein synthesis is correlated with double-stranded RNA synthesis and not single-stranded RNA synthesis. Virology 125:314-323.
6. Devereux, J., Haeberli, P., and Smithies, O. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
7. Elnagar, S., and Murant, A. F. 1978. Relations of carrot red leaf and carrot mottle virus with their aphid vector, Cavariella aegopodii. Ann. Appl. Biol. 89:237-244.
8. Falk, B. W., Chin, L.-S., and Duffus, J. E. 1989. Complementary DNA cloning and hybridization analysis of beet western yellows luteovirus RNAs. J. Gen. Virol. 70:1301-1309.
9. Falk, B. W., and Duffus, J. E. 1981. Epidemiology of the helper-dependent aphid-transmitted virus complexes. Pages 162-179 in: Plant Diseases and Vectors: Ecology and Epidemiology. K. Maramorosch and K. F. Harris, eds. Academic Press, New York.
10. Falk, B. W., and Duffus, J. E. 1984. Identification of small single- and double-stranded RNAs associated with severe symptoms in beet western yellows virus-infected Capsella bursa-pastoris. Phytopathology 74: 1224-1229.
11. Gibbs, M. J., Cooper, J. I., and Waterhouse, P. M. 1996. The genome organization and affinities of an Australian isolate of carrot mottle umbravirus. Virology 224:310-313.
12. Huiet, L., Tsai, J. H., and Falk, B. W. 1992. Complete sequence of maize stripe virus RNA 4 and mapping of its subgenomic RNAs. J. Gen, Virol. 73:1603-1607.
13. Hull, R., and Adams, A. N. 1968. Groundnut rosette and its assistor virus. Ann. Appl. Biol. 62:139-146.
14. Koonin, E. V. 1991. The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses. J. Gen. Virol. 72:2197-2207.
15. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T-4. Nature (Lond.) 227:680-685.
16. McMaster, G. K., and Carmichael, G. C. 1977. Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels using glyoxal and acridine orange. Proc. Natl. Acad. Sci. U.S.A. 74:4835-4837.
17. Murant, A. F. 1975. Occurrence of mottle and redleaf components of carrot motley dwarf disease in British Columbia. Can. Plant Dis. Surv. 55:103-105.
18. Murant, A. F. 1990. Dependence of groundnut rosette virus on its satellite RNA as well as on groundnut rosette assister luteovirus for transmission by Aphis craccivora. J. Gen. Virol. 71:2163-2166.
19. Murant, A. F., Waterhouse, P. M., Raschke, J. H., and Robinson, D. J. 1985. Carrot red leaf and carrot mottle virus: Observations on the composition of the particles in single and mixed infections. J. Gen. Virol. 66: 1575-1579.
20. Passmore, B. K., Sanger, M., Chin, L.-S., Falk, B. W., and Bruening, G. 1993. A subviral, independently-replicating RNA stimulates the replication of beet western yellows luteovirus. Proc. Natl. Acad. Sci. U.S.A. 90: 10168-10172.
21. Rasochova, L., Passmore, B. K., Falk, B. W., and Miller, W. A. 1997. The satellite RNA of barley yellow dwarf virus-RPV is supported by beet western yellows in dicotyledonous protoplasts and plants. Virology 231:182-191.
22. Sanger, F., Nicklen, S., and Coulson, A. R. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. U.S.A. 74:5463-5467.
23. Sanger, M., Passmore, B., Falk, B. W., Bruening, G., Ding, B., and Lucas, W. J. 1994. Symptom severity of beet western yellows virus stain ST9 is conferred by the associated RNA and is not associated with virus release from the phloem. Virology 200:48-55.
24. Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
25. Stubbs, L. L. 1948. A new virus of carrots: Its transmission, host range, and control. Aust. J. Sci. Res. B1:303-332.
26. Stubbs, L. L. 1952. Further host range and transmission studies with a virus disease of carrot endemic in Australia. Aust. J. Sci. Res. B5:399-408.
27. Stubbs, L. L. 1956. Motley dwarf disease of carrot in California. Plant Dis. Rep. 40:763-764.
28. Taliansky, M. E., Robinson, D. J., and Murant, A. F. 1996. Complete nucleotide sequence and organization of the RNA genome of groundnut ; rosette umbravirus. J. Gen. Virol. 77:2335-2345.
29. Valverde, R. A., Nameth, S. T., and Jordon, R. L. 1990. Analysis of double-stranded RNA for plant virus diagnosis. Plant Dis. 74:255-258.
30. Waterhouse, P. M., and Murant, A. F. 1981. Purification of carrot red leaf virus and evidence from four serological tests for its relationship to luteoviruses. J. Gen. Virol. 57:191-204.
31. Waterhouse, P. M., and Murant, A. F. 1983. Further evidence on the nature of the dependence of carrot mottle virus on carrot red leaf virus for transmission by aphids. Ann. Appl. Biol. 103:455-464.
32. Watson, M., Serjeant, E. P., and Lennon, E. A. 1964. Carrot motley dwarf and parsnip mottle viruses. Ann. Appl. Biol. 54:153-166.
33. Watson, M. T. 1994. California carrot motley dwarf: Identification and characterization of the viral agents associated with California carrot motley dwarf. Ph.D. dissertation. University of California, Davis.
34. Watson, M. T., and Falk, B. W. 1994. Ecological and epidemiological factors affecting carrot motley dwarf development in carrots grown in the Salinas Valley of California. Plant Dis. 78:477-481.