An automatic image analysis system for RLGS films

Mammalian Genome

Volumn 9, Issue 8, 1998, Pages 643-651

  Sugahara, Yuichi ^a,b,c   Akiyoshi, Shingo ^a   Okazaki, Yasushi ^a   Hayashizaki, Yoshihide ^a,c,d   Tanihata, Isao ^b  

^a RIKEN TSUKUBA INSTITUTE   (Japan)

^b RIKEN   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^d Genome Science Laboratory

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOMATION; DATA ANALYSIS; GENE MAPPING; GENOME IMPRINTING; IMAGE ANALYSIS; INFORMATION PROCESSING; SCREENING;

ANIMALS; AUTOMATION; CHROMOSOME MAPPING; CROSSES, GENETIC; GENOME; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MICE; MICE, INBRED C3H; MURIDAE; OBSERVER VARIATION; RESTRICTION MAPPING; SEQUENCE ANALYSIS, DNA;

EID: 0031904623     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359900837     Document Type: Article

References (12)

1. Akama TO, Okazaki Y, Itoh M, Okuizumi H, Konno H et al. (1998) Isolation of DNA sequences amplified at chromosome 19q13.1-q13.2 including the AKT2 locus in human pancreatic cancer. Cancer Res. in press
2. Hatada I, Hayashizaki Y, Hirotsune S, Komatsubara H, Mukai T (1991) A genomic scanning method for higher organisms using restriction sites as landmarks. Proc Natl Acad Sci USA 88, 9523-9527
3. Hayashizaki Y, Hirotsune S, Okazaki Y, Hatada I, Shibata H et al. (1993) Restriction landmark genomic scanning method and its various applications. Electrophoresis 14, 251-258
4. Hayashizaki Y, Hirotsune S, Okazaki Y, Shibata H, Akasako A et al. (1994a) A genetic linkage map of mouse using restriction landmark genomic scanning (RLGS). Genetics 138, 1207-1238
5. Hayashizaki Y, Shibata H, Hirotsune S, Sugino H, Okazaki Y et al. (1994b) Identification of an imprinted U2af binding protein related sequence on mouse chromosome 11 using the RLGS method. Nature Genet 6, 33-40
6. Kawai J, Hirotsune S, Hirose K, Fushiki S, Watanabe S et al. (1993) Methylation profiles of genomic DNA of mouse developmental brain detected by restriction landmark genomic scanning (RLGS) method. Nucleic Acids Res 21, 5604-5608
7. Miwa W, Yasuda J, Murakami Y, Yashima K, Sugano K et al. (1996) RLGS-M based genome-wide scanning of DNA methylation status in mouse liver tumorigenesis. Biochem Biophys Res Commun 225, 968-974
8. Ohsumi T, Okazaki Y, Okuizumi H, Shibata K, Hanami T et al. (1995) Loss of heterozygosity in chromosome 1, 5, 7 and 13 in mouse hepatoma detected by systematic genome-wide scanning using RLGS genetic map. Biochem Biophys Res Commun 212, 632-639
9. Okazaki Y, Okuizumi H, Sasaki N, Ohsumi T, Kuromitsu J et al. (1994) A genetic linkage map of mouse using an expanded production system of restriction landmark genomic scanning (RLGS Ver. 1.8). Biochem Biophys Res Commun 205, 1922-1929
10. Okazaki Y, Hirose K, Hirotsune S, Okuizumi H, Sasaki N et al. (1995) Direct detection and isolation of restriction landmark genomic scanning (RLGS) spot DNA markers tightly linked to a specific trait by using RLGS spot-bombing method. Proc Natl Acad Sci USA 92, 5610-5614
11. Okazaki Y, Okuizumi H, Ohsumi T, Nomura O, Takada S et al. (1996) A genetic linkage map of the Syrian hamster and localization of cardiomyopathy locus on chromosome 9qa2.1-bl using RLGS spot-mapping. Nat Genet 13, 87-90
12. Plass C, Shibata H, Kalcheva I, Mullins L, Kotelevtseva N et al. (1996) Identification of Grf 1 on mouse chromosome 9 as an imprinted gene by RLGS-M. Nat Genet 14, 106-109