-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-415.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-415
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0029000661
-
Interaction of the Neisseria gonorrhoeae PilA protein with the pilE promoter involves multiple sites on the DNA
-
Arvidson, C. G., and M. So. 1995. Interaction of the Neisseria gonorrhoeae PilA protein with the pilE promoter involves multiple sites on the DNA. J. Bacteriol. 177:2497-2504.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 2497-2504
-
-
Arvidson, C.G.1
So, M.2
-
3
-
-
0028986354
-
A promoter associated with the neisserial repeat (NR) can be used to transcribe the uvrB gene from Neisseria gonorrhoeae
-
Black, C. G., J. A. M. Fyfe, and J. K. Davies. 1995. A promoter associated with the neisserial repeat (NR) can be used to transcribe the uvrB gene from Neisseria gonorrhoeae. J. Bacteriol. 177:1952-1958.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1952-1958
-
-
Black, C.G.1
Fyfe, J.A.M.2
Davies, J.K.3
-
4
-
-
0028142648
-
Domain organization of RNA polymerase alpha subunit: C-terminal 85 amino acids constitute a domain capable of dimerization and DNA binding
-
Blatter, E. E., W. Ross, H. Tang, R. L. Gourse, and R. H. Ebright. 1994. Domain organization of RNA polymerase alpha subunit: C-terminal 85 amino acids constitute a domain capable of dimerization and DNA binding. Cell 78:889-896.
-
(1994)
Cell
, vol.78
, pp. 889-896
-
-
Blatter, E.E.1
Ross, W.2
Tang, H.3
Gourse, R.L.4
Ebright, R.H.5
-
5
-
-
0029019840
-
Organization of tcp, acf, and tox T genes within a ToxT-dependent operon
-
Brown, R. C., and R. K. Taylor. 1995. Organization of tcp, acf, and tox T genes within a ToxT-dependent operon. Mol. Microbiol. 16:425-439.
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 425-439
-
-
Brown, R.C.1
Taylor, R.K.2
-
6
-
-
0028061282
-
Promoter structure, promoter recognition, and transcription activation in prokaryotes
-
Busby, S., and R. H. Ebright. 1994. Promoter structure, promoter recognition, and transcription activation in prokaryotes. Cell 79:743-746.
-
(1994)
Cell
, vol.79
, pp. 743-746
-
-
Busby, S.1
Ebright, R.H.2
-
7
-
-
0030613727
-
54 promoters upstream of the pilE genes of both Neisseria gonorrhoeae and Neisseria meningitidis are functional when transferred to Pseudomonas aeruginosa
-
54 promoters upstream of the pilE genes of both Neisseria gonorrhoeae and Neisseria meningitidis are functional when transferred to Pseudomonas aeruginosa. Gene 198:89-97.
-
(1997)
Gene
, vol.198
, pp. 89-97
-
-
Carrick, C.S.1
Fyfe, J.A.M.2
Davies, J.K.3
-
9
-
-
0021710080
-
E. coli integration host factor binds to specific sites in DNA
-
Craig, N. L., and H. A. Nash. 1984. E. coli integration host factor binds to specific sites in DNA. Cell 39:707-716.
-
(1984)
Cell
, vol.39
, pp. 707-716
-
-
Craig, N.L.1
Nash, H.A.2
-
10
-
-
0029987492
-
Isolation of an IHF-deficient mutant of a Pseudomonas aeruginosa mucoid isolate and evaluation of the role of IHF in algD gene expression
-
Delic-Atree, I., B. Toussaint, A. Froger, J. C. Willison, and P. M. Vignais. 1996. Isolation of an IHF-deficient mutant of a Pseudomonas aeruginosa mucoid isolate and evaluation of the role of IHF in algD gene expression. Microbiology 142:2785-2793.
-
(1996)
Microbiology
, vol.142
, pp. 2785-2793
-
-
Delic-Atree, I.1
Toussaint, B.2
Froger, A.3
Willison, J.C.4
Vignais, P.M.5
-
12
-
-
0030045015
-
DNA-binding determinants of the alpha subunit of RNA polymerase: Novel DNA-binding architecture
-
Gaal, T., W. Ross, E. E. Blatter, H. Tang, X. Jia, V. V. Krishnan, N. Assa-Munt, and R. H. Ebright. 1996. DNA-binding determinants of the alpha subunit of RNA polymerase: novel DNA-binding architecture. Genes Dev. 10:16-26.
-
(1996)
Genes Dev.
, vol.10
, pp. 16-26
-
-
Gaal, T.1
Ross, W.2
Blatter, E.E.3
Tang, H.4
Jia, X.5
Krishnan, V.V.6
Assa-Munt, N.7
Ebright, R.H.8
-
13
-
-
0026451620
-
Stimulation of the phage λ pL promoter by integration host factor requires the carboxy terminus of the α-subunit of RNA polymerase
-
Giladi, H., K. Igarashi, A. Ishihama, and A. B. Oppenheim. 1992. Stimulation of the phage λ pL promoter by integration host factor requires the carboxy terminus of the α-subunit of RNA polymerase. J. Mol. Biol. 227: 985-990.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 985-990
-
-
Giladi, H.1
Igarashi, K.2
Ishihama, A.3
Oppenheim, A.B.4
-
15
-
-
0025180835
-
Searching for and predicting the activity of sites for DNA binding proteins: Compilation and analysis of the binding sites for Escherichia coli integration host factor (HIF)
-
Goodrich, J. A., M. L. Schwartz, and W. R. McClure. 1990. Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (HIF). Nucleic Acids Res. 18:4993-5000.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 4993-5000
-
-
Goodrich, J.A.1
Schwartz, M.L.2
McClure, W.R.3
-
16
-
-
0028922082
-
The regulation of transcription by integration host factor
-
Goosen, N., and P. van de Putte. 1995. The regulation of transcription by integration host factor. Mol. Microbiol. 16:1-7.
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 1-7
-
-
Goosen, N.1
Van De Putte, P.2
-
17
-
-
0028238186
-
Determining the DNA sequence elements required for binding integration host factor to two different target sites
-
Hales, L. M., R. I. Gumport, and J. F. Gardner. 1994. Determining the DNA sequence elements required for binding integration host factor to two different target sites. J. Bacteriol. 176:2999-3006.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2999-3006
-
-
Hales, L.M.1
Gumport, R.I.2
Gardner, J.F.3
-
18
-
-
0031037821
-
Integration host factor is a transcriptional cofactor of pilE in Neisseria gonorrhoeae
-
Hill, S. A., D. S. Samuels, J. H. Carlson, J. Wilson, D. Hogan, L. Lubke, and R. J. Belland. 1997. Integration host factor is a transcriptional cofactor of pilE in Neisseria gonorrhoeae. Mol. Microbiol. 23:649-656.
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 649-656
-
-
Hill, S.A.1
Samuels, D.S.2
Carlson, J.H.3
Wilson, J.4
Hogan, D.5
Lubke, L.6
Belland, R.J.7
-
19
-
-
14444281287
-
-
Personal communication
-
Hill, S. A. Personal communication.
-
-
-
Hill, S.A.1
-
20
-
-
0027419713
-
PilS and PilR, a two-component transcriptional regulatory system controlling expression of type 4 fimbriae in Pseudomonas aeruginosa
-
Hobbs, M., E. S. R. Collie, P. D. Free, S. P. Livingston, and J. S. Mattick. 1993. PilS and PilR, a two-component transcriptional regulatory system controlling expression of type 4 fimbriae in Pseudomonas aeruginosa. Mol. Microbiol. 7:669-682.
-
(1993)
Mol. Microbiol.
, vol.7
, pp. 669-682
-
-
Hobbs, M.1
Collie, E.S.R.2
Free, P.D.3
Livingston, S.P.4
Mattick, J.S.5
-
21
-
-
0025103859
-
Sequence analysis of two temperature-sensitive mutations in the alpha subunit gene (rpoA) of Escherichia coli RNA polymerase
-
Igarashi, K., N. Fujita, and A. Ishihama. 1990. Sequence analysis of two temperature-sensitive mutations in the alpha subunit gene (rpoA) of Escherichia coli RNA polymerase. Nucleic Acids Res. 18:5945-5948.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5945-5948
-
-
Igarashi, K.1
Fujita, N.2
Ishihama, A.3
-
22
-
-
0342561247
-
Formation of pilin in Pseudomonas aeruginosa requires the alternative sigma factor (RpoN) of RNA polymerase
-
Ishimoto, K. S., and S. Lory. 1989. Formation of pilin in Pseudomonas aeruginosa requires the alternative sigma factor (RpoN) of RNA polymerase. Proc. Natl. Acad. Sci. USA 86:1954-1957.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 1954-1957
-
-
Ishimoto, K.S.1
Lory, S.2
-
23
-
-
0000736659
-
Neisseria gonorrhoeae. I. Virulence genetically linked to clonal variation
-
Kellogg, D. S., Jr., W. L. Peacock, Jr., W. E. Deacon, L. Brown, and C. I. Pirkle. 1963. Neisseria gonorrhoeae. I. Virulence genetically linked to clonal variation. J. Bacteriol. 85:1274-1279.
-
(1963)
J. Bacteriol.
, vol.85
, pp. 1274-1279
-
-
Kellogg Jr., D.S.1
Peacock Jr., W.L.2
Deacon, W.E.3
Brown, L.4
Pirkle, C.I.5
-
24
-
-
0030998924
-
The plasmid R64 thin pilus identified as a Type IV pilus
-
Kim, S.-R., and T. Komano. 1997. The plasmid R64 thin pilus identified as a Type IV pilus. J. Bacteriol. 179:3594-3603.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 3594-3603
-
-
Kim, S.-R.1
Komano, T.2
-
25
-
-
0030918109
-
Control of Neisseria gonorrhoeae pilin gene expression by environmental factors: Involvement of the pilAlpilB regulatory genes
-
Larribe, M., M.-K. Taha, A. Topilko, and C. Marchal. 1997. Control of Neisseria gonorrhoeae pilin gene expression by environmental factors: involvement of the pilAlpilB regulatory genes. Microbiology 143:1757-1764.
-
(1997)
Microbiology
, vol.143
, pp. 1757-1764
-
-
Larribe, M.1
Taha, M.-K.2
Topilko, A.3
Marchal, C.4
-
27
-
-
0028338954
-
An alternative protein targeting pathway in Escherichia coli: Studies on the role of FtsY
-
Luirink, J., C. M. ten Hagen-Jongman, C. C. van der Weijden, B. Oudega, S. High, B. Dobberstein, and R. Kusters. 1994. An alternative protein targeting pathway in Escherichia coli: studies on the role of FtsY. EMBO J. 13: 2289-2296.
-
(1994)
EMBO J.
, vol.13
, pp. 2289-2296
-
-
Luirink, J.1
Ten Hagen-Jongman, C.M.2
Van Der Weijden, C.C.3
Oudega, B.4
High, S.5
Dobberstein, B.6
Kusters, R.7
-
28
-
-
0030867901
-
Positioning of two alpha subunit carboxy-terminal domains of RNA polymerase at promoters by two transcription factors
-
Murakami, K., J. T. Owens, T. A. Belyaeva, C. F. Meares, S. J. W. Busby, and A. Ishihama. 1997. Positioning of two alpha subunit carboxy-terminal domains of RNA polymerase at promoters by two transcription factors. Proc. Natl. Acad. Sci. USA 94:11274-11278.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 11274-11278
-
-
Murakami, K.1
Owens, J.T.2
Belyaeva, T.A.3
Meares, C.F.4
Busby, S.J.W.5
Ishihama, A.6
-
29
-
-
1842335066
-
DNA flexibility of the UP element is a major determinant for transcriptional activation at the Escherichia coli acetate promoter
-
Negre, D., C. Bonod-Bidaud, C. Oudot, J. F. Prost, A. Kolb, A. Ishihama, A. J. Cozzone, and J. C. Cortay. 1997. DNA flexibility of the UP element is a major determinant for transcriptional activation at the Escherichia coli acetate promoter. Nucleic Acids Res. 15:713-718.
-
(1997)
Nucleic Acids Res.
, vol.15
, pp. 713-718
-
-
Negre, D.1
Bonod-Bidaud, C.2
Oudot, C.3
Prost, J.F.4
Kolb, A.5
Ishihama, A.6
Cozzone, A.J.7
Cortay, J.C.8
-
30
-
-
0026548087
-
DNA topology-mediated regulation of transcription initiation from the tandem promoters of the ilvGMEDA operon of Escherichia coli
-
Pagel, J. M., J. W. Winkelman, C. W. Adams, and G. W. Hatfield. 1992. DNA topology-mediated regulation of transcription initiation from the tandem promoters of the ilvGMEDA operon of Escherichia coli. J. Mol. Biol. 224: 919-935.
-
(1992)
J. Mol. Biol.
, vol.224
, pp. 919-935
-
-
Pagel, J.M.1
Winkelman, J.W.2
Adams, C.W.3
Hatfield, G.W.4
-
31
-
-
0030052931
-
Transcriptional activation by protein-induced DNA bending: Evidence for a DNA structural transmission model
-
Parekh, B. S., and G. W. Hatfield. 1996. Transcriptional activation by protein-induced DNA bending: evidence for a DNA structural transmission model. Proc. Natl. Acad. Sci. USA 93:1173-1177.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 1173-1177
-
-
Parekh, B.S.1
Hatfield, G.W.2
-
32
-
-
0029928660
-
The bundle-forming pili of enteropathogenic Escherichia coli: Transcriptional regulation by environmental signals
-
Puente, J. L., D. Bieber, S. W. Ramer, W. Murray, and G. K. Schoolnik. 1996. The bundle-forming pili of enteropathogenic Escherichia coli: transcriptional regulation by environmental signals. Mol. Microbiol. 20:87-100.
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 87-100
-
-
Puente, J.L.1
Bieber, D.2
Ramer, S.W.3
Murray, W.4
Schoolnik, G.K.5
-
33
-
-
0028230951
-
Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength
-
Rao, L., W. Ross, J. A. Appleman, T. Gaal, S. Leirmo, P. J. Schlax, M. T. Record, and R. L. Gourse. 1994. Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength. J. Mol. Biol. 235:1421-1435.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 1421-1435
-
-
Rao, L.1
Ross, W.2
Appleman, J.A.3
Gaal, T.4
Leirmo, S.5
Schlax, P.J.6
Record, M.T.7
Gourse, R.L.8
-
35
-
-
0027761839
-
A third recognition element in bacterial promoters: DNA binding by the α subunit of RNA polymerase
-
Ross, W., K. K. Gosink, J. Salo mon, K. Igarashi, C. Zou, A. Ishihama, K. Severinov, and R. L. Gourse. 1993. A third recognition element in bacterial promoters: DNA binding by the α subunit of RNA polymerase. Science 262: 1407-1413.
-
(1993)
Science
, vol.262
, pp. 1407-1413
-
-
Ross, W.1
Gosink, K.K.2
Salomon, J.3
Igarashi, K.4
Zou, C.5
Ishihama, A.6
Severinov, K.7
Gourse, R.L.8
-
36
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
37
-
-
0027452546
-
Activation of the Escherichia coli nitrate reductase (narGHJI) operon by NarL and Fnr requires integration host factor
-
Schroder, I., S. Darie, and R. P. Gunsalus. 1993. Activation of the Escherichia coli nitrate reductase (narGHJI) operon by NarL and Fnr requires integration host factor. J. Biol. Chem. 268:771-774.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 771-774
-
-
Schroder, I.1
Darie, S.2
Gunsalus, R.P.3
-
38
-
-
0021907363
-
Role of chromosomal rearrangement in N. gonorrhoeae pilus phase variation
-
Segal, E., E. Billyard, M. So, S. Storzbach, and T. F. Meyer. 1985. Role of chromosomal rearrangement in N. gonorrhoeae pilus phase variation. Cell 40:293-300.
-
(1985)
Cell
, vol.40
, pp. 293-300
-
-
Segal, E.1
Billyard, E.2
So, M.3
Storzbach, S.4
Meyer, T.F.5
-
39
-
-
0031020515
-
FtsY, the procaryotic signal recognition particle receptor homologue, is essential for biogenesis of membrane proteins
-
Seluanov, A., and E. Bibi. 1997. FtsY, the procaryotic signal recognition particle receptor homologue, is essential for biogenesis of membrane proteins. J. Biol. Chem. 272:2053-2055.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 2053-2055
-
-
Seluanov, A.1
Bibi, E.2
-
40
-
-
0024293537
-
Pilin expression in Neisseria gonorrhoeae is under both positive and negative transcriptional control
-
Taha, M.-K., M. So, H. S. Seifert, E. Billyard, and C. Marchal. 1988. Pilin expression in Neisseria gonorrhoeae is under both positive and negative transcriptional control. EMBO J. 7:4367-4378.
-
(1988)
EMBO J.
, vol.7
, pp. 4367-4378
-
-
Taha, M.-K.1
So, M.2
Seifert, H.S.3
Billyard, E.4
Marchal, C.5
-
41
-
-
0026063653
-
Control of pilus expression in Neisseria gonorrhoeae as an original system in the family of two-component regulators
-
Taha, M.-K., B. Dupuy. W. Saurin, M. So, and C. Marchal. 1991. Control of pilus expression in Neisseria gonorrhoeae as an original system in the family of two-component regulators. Mol. Microbiol. 5:137-148.
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 137-148
-
-
Taha, M.-K.1
Dupuy, B.2
Saurin, W.3
So, M.4
Marchal, C.5
-
42
-
-
0028935228
-
Phosphorylation and functional analysis of PilA, a protein involved in the transcriptional regulation of the pilin gene in Neisseria gonorrhoeae
-
Taha, M.-K., and D. Giorgini. 1995. Phosphorylation and functional analysis of PilA, a protein involved in the transcriptional regulation of the pilin gene in Neisseria gonorrhoeae. Mol. Microbiol. 15:667-677.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 667-677
-
-
Taha, M.-K.1
Giorgini, D.2
-
43
-
-
0002897754
-
Type 4 fimbriae
-
P. Klemm (ed.). CRC Press Inc., Boca Raton, Fla.
-
Tennent, J. M., and J. S. Mattick. 1994. Type 4 fimbriae, p. 127-170. In P. Klemm (ed.), Fimbriae. Adhesion, genetics, biogenesis, and vaccines. CRC Press Inc., Boca Raton, Fla.
-
(1994)
Fimbriae. Adhesion, Genetics, Biogenesis, and Vaccines
, pp. 127-170
-
-
Tennent, J.M.1
Mattick, J.S.2
-
44
-
-
0029849368
-
Cloning and characterization of bfpTVW, genes required for the transcriptional activation of bfpA in enteropathogenic Escherichia coli
-
Tobe, T., G. K. Schoolnik, I. Sohel, V. H. Bustamante, and J. L. Puente. 1996. Cloning and characterization of bfpTVW, genes required for the transcriptional activation of bfpA in enteropathogenic Escherichia coli. Mol. Microbiol. 21:963-975.
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 963-975
-
-
Tobe, T.1
Schoolnik, G.K.2
Sohel, I.3
Bustamante, V.H.4
Puente, J.L.5
-
45
-
-
0031472242
-
The E. coli signal recognition particle is required for the insertion of a subset of inner membrane proteins
-
Ulbrandt, N. D., J. A. Newitt, and H. D. Bernstein. 1997. The E. coli signal recognition particle is required for the insertion of a subset of inner membrane proteins. Cell 88:187-196.
-
(1997)
Cell
, vol.88
, pp. 187-196
-
-
Ulbrandt, N.D.1
Newitt, J.A.2
Bernstein, H.D.3
-
46
-
-
0031014035
-
Function of the C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase in basal expression and integration host factor-mediated activation of the early promoter of bacteriophage Mu
-
van Ulsen, P., M. Hillebrand, M. Kainz, R. Collard, L. Zulianello, P. van de Putte, R. L. Gourse, and N. Goosen. 1997. Function of the C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase in basal expression and integration host factor-mediated activation of the early promoter of bacteriophage Mu. J. Bacteriol. 179:530-537.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 530-537
-
-
Van Ulsen, P.1
Hillebrand, M.2
Kainz, M.3
Collard, R.4
Zulianello, L.5
Van De Putte, P.6
Gourse, R.L.7
Goosen, N.8
-
47
-
-
0029820565
-
Peptide methionine sulfoxide reductase contributes to the maintenance of adhesins in three major pathogens
-
Wizemann, T. M., J. Moskovitz, B. J. Pearce, D. Cundell, C. G. Arvidson, M. So, H. Weissbach, N. Brot, and H. R. Masure. 1996. Peptide methionine sulfoxide reductase contributes to the maintenance of adhesins in three major pathogens. Proc. Natl. Acad. Sci. USA 93:7985-7990.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 7985-7990
-
-
Wizemann, T.M.1
Moskovitz, J.2
Pearce, B.J.3
Cundell, D.4
Arvidson, C.G.5
So, M.6
Weissbach, H.7
Brot, N.8
Masure, H.R.9
-
48
-
-
0029591872
-
Genetic and functional evidence that type IV pili are required for social gliding motility in Myxococcus xanthus
-
Wu, S. S., and D. Kaiser. 1995. Genetic and functional evidence that type IV pili are required for social gliding motility in Myxococcus xanthus. Mol. Microbiol. 18:547-558.
-
(1995)
Mol. Microbiol.
, vol.18
, pp. 547-558
-
-
Wu, S.S.1
Kaiser, D.2
|