메뉴 건너뛰기




Volumn 4, Issue 3, 1998, Pages 276-284

A top-half tDNA minihelix is a good substrate for the eubacterial CCA- adding enzyme

Author keywords

Nucleotidyltransferase; tRNA

Indexed keywords

DNA; NUCLEOTIDYLTRANSFERASE; TRANSFER RNA;

EID: 0031883924     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (63)

References (41)
  • 1
    • 0029082529 scopus 로고
    • Structure of the P1 helix from group I self-splicing introns
    • Allain FH, Varani G. 1995. Structure of the P1 helix from group I self-splicing introns. J Mol Biol 250:333-353.
    • (1995) J Mol Biol , vol.250 , pp. 333-353
    • Allain, F.H.1    Varani, G.2
  • 2
    • 16044367245 scopus 로고    scopus 로고
    • Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
    • Bult CJ, White O, Olsen GJ et al. 1996. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273:1058-1073.
    • (1996) Science , vol.273 , pp. 1058-1073
    • Bult, C.J.1    White, O.2    Olsen, G.J.3
  • 3
    • 0023019585 scopus 로고
    • Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase
    • Cudny H, Lupski JR, Godson GN, Deutscher MP. 1986. Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase. J Biol Chem 261:6444-6449.
    • (1986) J Biol Chem , vol.261 , pp. 6444-6449
    • Cudny, H.1    Lupski, J.R.2    Godson, G.N.3    Deutscher, M.P.4
  • 4
    • 0025645986 scopus 로고
    • Characterization of deoxy- and ribo-containing oligonucleotide substrates in the hammerhead self-cleavage reaction
    • Dahm SC, Uhlenbeck OC. 1990. Characterization of deoxy- and ribo-containing oligonucleotide substrates in the hammerhead self-cleavage reaction. Biochimie 72:819-823.
    • (1990) Biochimie , vol.72 , pp. 819-823
    • Dahm, S.C.1    Uhlenbeck, O.C.2
  • 5
    • 77956942628 scopus 로고
    • tRNA nucleotidyltransferase
    • Deutscher MP. 1982. tRNA nucleotidyltransferase. The Enzymes 15:183-215.
    • (1982) The Enzymes , vol.15 , pp. 183-215
    • Deutscher, M.P.1
  • 7
    • 0017193110 scopus 로고
    • Polyamine stimulation and cation requirements of rabbit liver tRNA nucleotidyltransferase
    • Evans JA, Deutscher MP. 1976. Polyamine stimulation and cation requirements of rabbit liver tRNA nucleotidyltransferase. J Biol Chem 251:6646-6652.
    • (1976) J Biol Chem , vol.251 , pp. 6646-6652
    • Evans, J.A.1    Deutscher, M.P.2
  • 8
    • 0029970859 scopus 로고    scopus 로고
    • Interplay of tRNA-like structures from plant viral RNAs with partners of the translation and replication machineries
    • Giegé R. 1996. Interplay of tRNA-like structures from plant viral RNAs with partners of the translation and replication machineries. Proc Natl Acad Sci USA 93:12078-12081.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 12078-12081
    • Giegé, R.1
  • 9
    • 0028934068 scopus 로고
    • Kinetics and thermodynamics of the RNase P RNA cleavage reaction: Analysis of tRNA 3′-end variants
    • Hardt WD, Schlegl J, Erdmann VA, Hartmann RK. 1995. Kinetics and thermodynamics of the RNase P RNA cleavage reaction: Analysis of tRNA 3′-end variants. J Mol Biol 247:161-172.
    • (1995) J Mol Biol , vol.247 , pp. 161-172
    • Hardt, W.D.1    Schlegl, J.2    Erdmann, V.A.3    Hartmann, R.K.4
  • 10
    • 0028871926 scopus 로고
    • Dali: A network tool for protein structure comparison
    • Holm L, Sander C. 1995. Dali: A network tool for protein structure comparison. Trends Biochem Sci 20:345-247.
    • (1995) Trends Biochem Sci , vol.20 , pp. 345-1247
    • Holm, L.1    Sander, C.2
  • 11
    • 0027331587 scopus 로고
    • Fe·bleomycin cleaves a transfer RNA precursor and its "transfer DNA" analog at the same major site
    • Holmes CE, Hecht SM. 1993. Fe·bleomycin cleaves a transfer RNA precursor and its "transfer DNA" analog at the same major site. J Biol Chem 268:25909-25913.
    • (1993) J Biol Chem , vol.268 , pp. 25909-25913
    • Holmes, C.E.1    Hecht, S.M.2
  • 12
    • 0027203930 scopus 로고
    • The solution structure of a d[C(TTCG)G] DNA hairpin and comparison to the unusually stable RNA analogue
    • James JK, Tinoco I Jr. 1993. The solution structure of a d[C(TTCG)G] DNA hairpin and comparison to the unusually stable RNA analogue. Nucleic Acids Res 21:3287-3293.
    • (1993) Nucleic Acids Res , vol.21 , pp. 3287-3293
    • James, J.K.1    Tinoco I., Jr.2
  • 14
    • 0023936459 scopus 로고
    • Aminoacylation of synthetic DNAs corresponding to Escherichia coli phenylalanine and lysine tRNAs
    • Khan AS, Roe BA. 1988. Aminoacylation of synthetic DNAs corresponding to Escherichia coli phenylalanine and lysine tRNAs. Science 241:76-79.
    • (1988) Science , vol.241 , pp. 76-79
    • Khan, A.S.1    Roe, B.A.2
  • 15
    • 0023907071 scopus 로고
    • Gene for a novel tRNA species that accepts L-serine and cotranslationally inserts selenocysteine
    • Leinfelder W, Zehelein E, Mandrand-Berthelot MA, Böck A. 1988. Gene for a novel tRNA species that accepts L-serine and cotranslationally inserts selenocysteine. Nature 331:723-725.
    • (1988) Nature , vol.331 , pp. 723-725
    • Leinfelder, W.1    Zehelein, E.2    Mandrand-Berthelot, M.A.3    Böck, A.4
  • 16
    • 0030063762 scopus 로고    scopus 로고
    • Effects of nucleotide substitutions within the T-loop of precursor tRNAs on interaction with ATP/CTP:tRNA nucleotidyltransferases from Escherichia coli and yeast
    • Li Z, Gillis KA, Hegg LA, Zhang J, Thurlow DL. 1996. Effects of nucleotide substitutions within the T-loop of precursor tRNAs on interaction with ATP/CTP:tRNA nucleotidyltransferases from Escherichia coli and yeast. Biochem J 314:49-53.
    • (1996) Biochem J , vol.314 , pp. 49-53
    • Li, Z.1    Gillis, K.A.2    Hegg, L.A.3    Zhang, J.4    Thurlow, D.L.5
  • 17
    • 0027920505 scopus 로고
    • Chemical probing of tDNAPhe with transition metal complexes: A structural comparison of RNA and DNA
    • Lim AC, Barton JK. 1993. Chemical probing of tDNAPhe with transition metal complexes: A structural comparison of RNA and DNA. Biochemistry 32:11029-11034.
    • (1993) Biochemistry , vol.32 , pp. 11029-11034
    • Lim, A.C.1    Barton, J.K.2
  • 18
    • 0029982648 scopus 로고    scopus 로고
    • Requirements for cleavage by a modified RNase P of a small model substrate
    • Liu F, Altman S. 1996. Requirements for cleavage by a modified RNase P of a small model substrate. Nucleic Acids Res 24:2690-2696.
    • (1996) Nucleic Acids Res , vol.24 , pp. 2690-2696
    • Liu, F.1    Altman, S.2
  • 19
    • 0002630888 scopus 로고
    • The genomic tag hypothesis: Modern viruses as molecular fossils of ancient strategies for genomic replication
    • Gesteland RF, Atkins JF, eds. Plainview, New York: Cold Spring Harbor Laboratory Press
    • Maizels N, Weiner AM. 1993. The genomic tag hypothesis: Modern viruses as molecular fossils of ancient strategies for genomic replication. In: Gesteland RF, Atkins JF, eds. The RNA world. Plainview, New York: Cold Spring Harbor Laboratory Press, pp 577-602.
    • (1993) The RNA World , pp. 577-602
    • Maizels, N.1    Weiner, A.M.2
  • 20
    • 0029962371 scopus 로고    scopus 로고
    • Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases
    • Martin G, Keller W. 1996. Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases. EMBO J 15:2593-2603.
    • (1996) EMBO J , vol.15 , pp. 2593-2603
    • Martin, G.1    Keller, W.2
  • 22
    • 0026766983 scopus 로고
    • Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove
    • Musier-Forsyth K, Schimmel P. 1992. Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove. Nature 557:513-515.
    • (1992) Nature , vol.557 , pp. 513-515
    • Musier-Forsyth, K.1    Schimmel, P.2
  • 23
    • 0003173754 scopus 로고
    • On the origin of the ribosome: Coevolution of sub-domains of tRNA and rRNA
    • Gesteland RF, Atkins JF, eds. Plainview, New York: Cold Spring Harbor Laboratory Press
    • Noller HF. 1993. On the origin of the ribosome: Coevolution of sub-domains of tRNA and rRNA. In: Gesteland RF, Atkins JF, eds. The RNA world. Plainview, New York: Cold Spring Harbor Laboratory Press. pp 137-156.
    • (1993) The RNA World , pp. 137-156
    • Noller, H.F.1
  • 24
    • 0028131972 scopus 로고
    • Interaction of the 3′-end of tRNA with ribonuclease P RNA
    • Oh BK, Pace NR. 1994. Interaction of the 3′-end of tRNA with ribonuclease P RNA. Nucleic Acids Res 22:4087-4094.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4087-4094
    • Oh, B.K.1    Pace, N.R.2
  • 26
    • 0026684994 scopus 로고
    • Important 2′-hydroxyl groups in model substrates for M1 RNA, the catalytic RNA subunit of RNase P from Escherichia coli
    • Perreault JP, Altman S. 1992. Important 2′-hydroxyl groups in model substrates for M1 RNA, the catalytic RNA subunit of RNase P from Escherichia coli. J Mol Biol 226:399-409.
    • (1992) J Mol Biol , vol.226 , pp. 399-409
    • Perreault, J.P.1    Altman, S.2
  • 27
    • 0024831904 scopus 로고
    • The synthesis and functional evaluation of RNA and DNA polymers having the sequence of Escherichia coli tRNA(fMet)
    • Perreault JP, Pon RT, Jiang M, Usman N, Pika J, Ogilvie KK, Cedergren R. 1989. The synthesis and functional evaluation of RNA and DNA polymers having the sequence of Escherichia coli tRNA(fMet). Eur J Biochem 186:87-93.
    • (1989) Eur J Biochem , vol.186 , pp. 87-93
    • Perreault, J.P.1    Pon, R.T.2    Jiang, M.3    Usman, N.4    Pika, J.5    Ogilvie, K.K.6    Cedergren, R.7
  • 28
    • 0028090464 scopus 로고
    • NMR analysis of tRNA acceptor stem microhelices: Discriminator base change affects tRNA conformation at the 3′ end
    • Puglisi EV, Puglisi JD, Williamson JR, RajBhandary UL 1994. NMR analysis of tRNA acceptor stem microhelices: Discriminator base change affects tRNA conformation at the 3′ end. Proc Natl Acad Sci USA 91:11467-11471.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 11467-11471
    • Puglisi, E.V.1    Puglisi, J.D.2    Williamson, J.R.3    Rajbhandary, U.L.4
  • 29
    • 0024706769 scopus 로고
    • Telomeric function of the tRNA-like structure of brome mosaic virus RNA
    • Rao AL, Dreher TW, Marsh LE, Hall TC. 1989. Telomeric function of the tRNA-like structure of brome mosaic virus RNA. Proc Natl Acad Sci USA 86:5335-5339.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 5335-5339
    • Rao, A.L.1    Dreher, T.W.2    Marsh, L.E.3    Hall, T.C.4
  • 30
    • 0028241947 scopus 로고
    • Minimalist aminoacylated RNAs as efficient substrates for elongation factor Tu
    • Rudinger J, Blechschmidt B, Ribeiro S, Sprinzl M. 1994. Minimalist aminoacylated RNAs as efficient substrates for elongation factor Tu. Biochemistry 33:5682-5688.
    • (1994) Biochemistry , vol.33 , pp. 5682-5688
    • Rudinger, J.1    Blechschmidt, B.2    Ribeiro, S.3    Sprinzl, M.4
  • 31
    • 0027436686 scopus 로고
    • An operational RNA code for amino acids and possible relationship to genetic code
    • Schimmel P, Giegé R, Moras D, Yokoyama S. 1993. An operational RNA code for amino acids and possible relationship to genetic code. Proc Natl Acad Sci USA 90:8763-8768.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 8763-8768
    • Schimmel, P.1    Giegé, R.2    Moras, D.3    Yokoyama, S.4
  • 32
    • 0029009371 scopus 로고
    • Transfer RNA: From mini-helix to genetic code
    • Schimmel P, Ribas de Pouplana L. 1995. Transfer RNA: From mini-helix to genetic code. Cell 81:983-986.
    • (1995) Cell , vol.81 , pp. 983-986
    • Schimmel, P.1    Ribas De Pouplana, L.2
  • 33
    • 0026696161 scopus 로고
    • RNA tetraloops as minimalist substrates for aminoacylation
    • Shi JP, Martinis, SA, Schimmel P. 1992. RNA tetraloops as minimalist substrates for aminoacylation. Biochemistry 31:4931-4936.
    • (1992) Biochemistry , vol.31 , pp. 4931-4936
    • Shi, J.P.1    Martinis, S.A.2    Schimmel, P.3
  • 34
    • 0029994685 scopus 로고    scopus 로고
    • Evidence for the existence of a pseudoknot structure at the 3′ terminus of the flavivirus genomic RNA
    • Shi PY, Brinton MA, Veal JM, Zhong YY, Wilson WD. 1996. Evidence for the existence of a pseudoknot structure at the 3′ terminus of the flavivirus genomic RNA. Biochemistry 35:4222-4230.
    • (1996) Biochemistry , vol.35 , pp. 4222-4230
    • Shi, P.Y.1    Brinton, M.A.2    Veal, J.M.3    Zhong, Y.Y.4    Wilson, W.D.5
  • 35
    • 0030778239 scopus 로고    scopus 로고
    • A reliable method for recovering active recombinant protein from inclusion bodies by renaturation on an affinity column
    • Shi PY, Maizels N, Weiner AM. 1997. A reliable method for recovering active recombinant protein from inclusion bodies by renaturation on an affinity column. Bio Techniques 23:1036-1038.
    • (1997) Bio Techniques , vol.23 , pp. 1036-1038
    • Shi, P.Y.1    Maizels, N.2    Weiner, A.M.3
  • 36
    • 0029903905 scopus 로고    scopus 로고
    • Phylogenetic comparative mutational analysis of the base-pairing between RNase P RNA and its substrate
    • Svard SG, Kagardt U, Kirsebom LA. 1996. Phylogenetic comparative mutational analysis of the base-pairing between RNase P RNA and its substrate. RNA 2:463-472.
    • (1996) RNA , vol.2 , pp. 463-472
    • Svard, S.G.1    Kagardt, U.2    Kirsebom, L.A.3
  • 37
    • 0030910496 scopus 로고    scopus 로고
    • Unidentified open reading frames in the genome of Methanococcus jannaschii are similar in sequence to an archaebacterial gene for tRNA nucleotidyltransferase
    • Thurlow DL, Pulido GM, Millar KJ. 1997. Unidentified open reading frames in the genome of Methanococcus jannaschii are similar in sequence to an archaebacterial gene for tRNA nucleotidyltransferase. J Mol Evol 44:686-689.
    • (1997) J Mol Evol , vol.44 , pp. 686-689
    • Thurlow, D.L.1    Pulido, G.M.2    Millar, K.J.3
  • 38
    • 0023449816 scopus 로고
    • tRNA-like structures tag the 3′ ends of genomic RNA molecules for replication: Implications for the origin of protein synthesis
    • Weiner AM, Maizels N. 1987. tRNA-like structures tag the 3′ ends of genomic RNA molecules for replication: Implications for the origin of protein synthesis. Proc Natl Acad Sci USA 84:7383-7387.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 7383-7387
    • Weiner, A.M.1    Maizels, N.2
  • 39
    • 0026711027 scopus 로고
    • Minimum ribonucleotide requirement for catalysis by the RNA hammerhead domain
    • Yang JH, Usman N, Chartrand P, Cedergren R. 1992. Minimum ribonucleotide requirement for catalysis by the RNA hammerhead domain. Biochemistry 31:5005-5009.
    • (1992) Biochemistry , vol.31 , pp. 5005-5009
    • Yang, J.H.1    Usman, N.2    Chartrand, P.3    Cedergren, R.4
  • 40
    • 0029903451 scopus 로고    scopus 로고
    • CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: Characterization of the CCA-adding enzyme from the archaeal hyperthermophile Sulfolobus shibatae
    • Yue D, Maizels N, Weiner AM. 1996. CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: Characterization of the CCA-adding enzyme from the archaeal hyperthermophile Sulfolobus shibatae. RNA 2:895-908.
    • (1996) RNA , vol.2 , pp. 895-908
    • Yue, D.1    Maizels, N.2    Weiner, A.M.3
  • 41
    • 0023394389 scopus 로고
    • RNA nucleotidyltransferase is not essential for Escherichia coli viability
    • Zhu L, Deutscher MP. 1987. tRNA nucleotidyltransferase is not essential for Escherichia coli viability. EMBO J 6:2473-2477.
    • (1987) EMBO J , vol.6 , pp. 2473-2477
    • Zhu, L.1    Deutscher, M.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.