Specificity of RNA binding by CPEB: Requirement for RNA recognition motifs and a novel zinc finger

Molecular and Cellular Biology

Volumn 18, Issue 2, 1998, Pages 685-693

  Hake, Laura E ^a,b   Mendez, Raul ^a   Richter, Joel D ^a  

^a UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

^b BOSTON COLLEGE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; RNA BINDING PROTEIN; ZINC FINGER PROTEIN;

AMINO ACID SUBSTITUTION; AMINO TERMINAL SEQUENCE; ANIMAL CELL; ARTICLE; BINDING AFFINITY; CONFORMATIONAL TRANSITION; MOLECULAR RECOGNITION; NONHUMAN; OOCYTE MATURATION; POLYADENYLATION; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; PROTEIN RNA BINDING; RNA TRANSLATION; TRANSLATION INITIATION; XENOPUS LAEVIS;

EID: 0031883566     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.18.2.685     Document Type: Article

References (43)

1. Auld, D. S. 1988. Use of chelating agents to inhibit enzymes. Methods Enzymol. 158:110-114.
2. Berg, J. M., and Y. Shi. 1996. The galvanization of biology: a growing appreciation for the roles of zinc. Science 271:1081-1085.
3. Bilger, A., C. A. Fox, E. Wahle, and M. Wickens. 1994. Nuclear polyadenylation factors recognize cytoplasmic polyadenylation elements. Genes Dev 8:1106-1116.
4. Bouvet, P., and A. P. Wolffe. 1994. A role for transcription and FRGY2 in masking maternal mRNA within Xenopus oocytcs. Cell 77:931-941.
5. Burd, C. G., E. L. Matunis, and G. Dreyfuss. 1991. The multiple RNA-binding domains of the mRNA poly(A) binding protein have different RNA-binding activities. Mol. Cell. Biol. 11:3419-3424.
6. Burd, C. G., and G. Dreyfuss. 1994. Conserved structures and diversity of functions of RNA-binding proteins. Science 265:615-621.
7. Carey, M., H. Kakidani, J. Leatherwood, F. Mostashari, and M. Ptashne, 1989. An amino-terminal fragment of GAL4 binds DNA as a dimer. J. Mol. Biol. 209:423-432.
8. Cavaloc, Y., M. Popielarz, J.-P. Fuchs, R. Gattoni, and J. Stevenin. 1994. Characterization and cloning of the human splicing factor 9G8: a novel 35 kDa factor of the serine/arginine protein family. EMBO J. 13:2639-2649.
9. Chung, S. L., S. Jiang, S. Cheng, and H. Furneaux. 1996. Purification and properties of HuD, a neuronal RNA-binding protein. J. Biol. Chem. 271: 11518-11524.
10. Dalby, B., and D. M. Glover. 1993. Discrete sequence elements control posterior pole accumulation and translation repression of maternal cyclin B in Drosophila. EMBO J. 12:1219-1227.
11. De Moor, L., and J. D. Richter. 1997. The Mos pathway regulates cytoplasmic polyadenylation in Xenopus oocytes. Mol. Cell. Biol. 17:6419-6426.
12. Gebauer, F., W. Xu, G. M. Cooper, and J. D. Richter. 1994. Translational control by cytoplasmic polyadenylation of c-mos mRNA is necessary for oocyte maturation in the mouse. EMBO J. 13:5712-5720.
13. Gebauer, F., and J. D. Richter. 1996. Mouse cytoplasmic polyadenylylation element binding protein: an evolutionarily conserved protein that interacts with the cytoplasmic polyadenylylation elements of c-mos mRNA. Proc. Natl. Acad. Sci. USA 93:14602-14607.
14. Hake, L. E., and J. D. Richter. 1994. CPEB is a specificity factor that mediates cytoplasmic polyadenylation during Xenopus oocyte maturation. Cell 79:617-627.
15. Hake, L. E., and J. D. Richter. 1997. Translational regulation of maternal mRNA. Biochim. Biophys. Acta 133:M31-M38.
16. Kim-Ha, J., K. Kerr, and P. M. MacDonald. 1995. Translational regulation of oskar mRNA by bruno, an ovarian RNA binding protein. Cell 81:403-412.
17. Koushika, S. P., M. J. Lisbin, and K. White. 1996. ELAV, a Drosophila neuron-specific protein, mediates the generation of an alternatively spliced neural protein isoform. Curr. Biol. 6:1634-1648.
18. Kuge, H., and J. D. Richter. 1995. Cytoplasmic 3′ poly(A) addition induces 5′ cap ribose methylation: implications for translational control of maternal mRNA. EMBO J. 14:6301-6310.
19. Kuge, H., G. G. Brownlee, P. D. Gershon, and J. D. Richter. Submitted for publication.
20. Labbé, S., L. Larouche, D. Mailhot, and C. Seguin. 1993. Purification of mouse MEP-1, a nuclear protein which binds to the metal regulatory elements of genes encoding metallothionein. Nucleic Acids Res. 21:1549-1554.
21. Lane, D., P. Prentki, and M. Chandler. 1992. Use of gel retardation to analyze protein-nucleic acid interactions. Microbiol. Rev. 56:509-528.
22. Lantz, V., L. Ambrosio, and P. Schedl. 1992. The Drosophila orb gene is predicted to encode sex-specific germline RNA-binding protein and has localized transcripts in ovaries and early embryos. Development 115:75-88.
23. 2+-dependent 3′ processing activity of human immunodeficiency virus type 1 integrase in vivo. Biochemistry 35:5837-5844.
24. Levine, T. D., F. Gao, P. H. King, L. G. Andrews, and J. D. Keene. 1993. Hel-N1: an autoimmune RNA-binding protein with specificity for 3′ uridylate-rich untranslated regions of growth factor mRNAs. Mol. Cell. Biol. 13:3494-3504.
25. Lutz, C., and J. Alwine. 1994. Direct interaction of the U1 snRNP-A protein with the upstream element of the SV40 late polyadenylation signal. Genes Dev. 8:576-586.
26. McGrew, L. L., E. Dworkin-Rastl, M. B. Dworkin, and J. D. Richter. 1989. Poly(A) elongation during Xenopus oocyte maturation is required for translational recruitment and is mediated by a short sequence element. Genes Dev. 3:803-815.
27. Navaratnam, N., J. R. Morrison, S. Bhattacharya, D. Patel, T. Funahashi, F. Giannoni, B.-B. Teng, N. O. Davidson, and J. Scott. 1993. The p27 catalytic subunit of the apolipoprotein B mRNA editing enzyme is a cytidine deaminase. J. Biol. Chem. 268:20709-20712.
28. cdc2 and phosphorylation of a 58-kD CPE-binding protein. Genes Dev. 5:1697-1708.
29. Predki, P. F., and B. Sarkar. 1992. Effect of replacement of "zinc finger" zinc on estrogen receptor DNA interactions. J. Biol. Chem. 267:5842-5846.
30. Richter, J. D. 1996. Dynamics of poly(A) addition and removal during development, p. 481-503. In J. Hershey, M. Mathews, and S. Sonenberg (ed.), Translational control. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
31. Richter, J. D., and L. D. Smith. 1984. Reversible inhibition of translation by Xenopus oocyte-specific proteins. Nature 309:378-380.
32. Robbie, E., M. Peterson, E. Amaya, and T. Musci. 1995. Temporal regulation of the Xenopus FGF receptor in development: a translation inhibitory element in the 3′ untranslated region. Development 121:1755-1785.
33. Salles, F., M. Lieberfarb, C. Wreden, J. Gergen, and S. Strickland. 1994. Coordinate initiation of Drosophila development by regulated polyadenylation of maternal messenger RNAs. Science 266:1996-1999.
34. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
35. Sanchez-Garcia, I., and T. H. Rabbits. 1994. The LIM domain: a new structural motif found in zinc-finger-like proteins. Trends Genet. 10:315-320.
36. Sheets, M. D., M. Wu, and M. Wickens. 1995. Polyadenylation of c-mos mRNA as a control point in Xenopus meiotic maturation. Nature 374:511-516.
37. Standart, N., M. Dale, E. Stewart, and T. Hunt. 1990. Maternal mRNA from clam oocytes can be specifically unmasked in vitro by antisense RNA complementary to the 3′ untranslated region. Genes Dev. 4:2157-2168.
38. Stebbins-Boaz, B., and J. D. Richter. 1994. Multiple sequence elements and a maternal mRNA product control cdk2 RNA polyadenylation and translation during early Xenopus development. Mol. Cell. Biol. 14:5870-5880.
39. Stebbins-Boaz, B., L. E. Hake, and J. D. Richter. 1996. CPEB controls the cytoplasmic polyadenylation of cyclin, cdk2, and c-mos mRNAs and is necessary for oocyte maturation in Xenopus. EMBO J. 15:2582-2592.
40. St. Johnston, D., and C. Nusslein-Volhard. 1992. The origin of pattern and polarity in the Drosophila embryo. Cell 68:210-219.
41. Strickland, S., J. Huarte, D. Belin, A. Vassalli, R. J. Rickles, and J.-D. Vassalli. 1988. Antisense RNA directed against the 3′ noncoding region prevents dormant mRNA activation in mouse oocytes. Science 241:680-684.
42. Wickens, M., J. Kimble, and S. Strickland. 1996. Translational control of developmental decisions, p. 411-450. In J. Hershey, M. Mathews, and N. Sonenberg (ed.), Translational control. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
43. Wilson, R., et al. 1994. 2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans. Nature 368:32-38.