Dynamic structures of granulocyte colony-stimulating factor proteins studied by normal mode analysis: Two domain-type motions in low frequency modes

Chemical and Pharmaceutical Bulletin

Volumn 46, Issue 7, 1998, Pages 1069-1077

  Sumikawa, Hiromi ^a,b   Suzuki, Ei Ichiro ^a   Fukuhara, Ken Ichi ^a   Nakajima, Yasushi ^b   Kamiya, Kenshu ^b   Umeyama, Hideaki ^b  

^a AJINOMOTO CO INC   (Japan)

^b KITASATO UNIVERSITY   (Japan)

Author keywords

Cytokine; Granulocyte colony stimulating factor (GCSF); Interleukin 6 (IL 6); Normal mode analysis

Indexed keywords

CYTOKINE; GRANULOCYTE COLONY STIMULATING FACTOR; GROWTH HORMONE; INTERLEUKIN 2; INTERLEUKIN 4; INTERLEUKIN 6; LEUKEMIA INHIBITORY FACTOR;

ARTICLE; CATTLE; CONTROLLED STUDY; DOG; HUMAN; MOTION; NONHUMAN; PROTEIN DOMAIN; PROTEIN STRUCTURE; RECEPTOR BINDING;

EID: 0031873374     PISSN: 00092363     EISSN: None     Source Type: Journal    
DOI: 10.1248/cpb.46.1069     Document Type: Article

References (25)

1. Abbreviations: IL-6, interleukin-6; NMR, nuclear magnetic resonance; NOE, nuclear Overhauser effect; GCSF, granulocyte colony-stimulating factor; LIF, leukemia inhibitory factor; CNTF, ciliary neurotrophic factor; BIOCES[E], BIOchemical Expart System.
2. Quake S. R., Abcock H., Chu S., Nature (London), 388, 151-154 (1997).
3. Kidera A., Go N., J. Mol. Biol., 225, 457-475 (1992).
4. Kidera A., Go N., J. Mol. Biol., 225, 477-486 (1992).
5. Sprang R. S., Bazan J. F., Curr. Opin. Struct. Biol., 3, 815-827 (1993).
6. Simpson R. J., Hammacher A., Smith D. K., Matthews J. M., Ward L. D., Protein Sci., 6, 929-955 (1997).
7. Kaneko H., Kuriki T., Shimada J., Handa S., Takata H., Yanase M., Okada S., Takada T., Umeyama H., Res. Comm. Biochem. Cell. Mol. Biol., in press.
8. Sumikawa H., Fukuhara K., Suzuki E., Matsuo Y., Nishikawa K., FEBS Lett., 404, 234-240 (1997).
9. Sumikawa H., Suzuki E., Chem. Pharm. Bull., 46, 136-138 (1998).
10. Somers W., Stahl M., Seehra J. S., EMBO. J., 16, 989-997 (1997).
11. Nishimura C. Watanabe A., Gouda H., Shimada I., Arata Y, Biochemistry, 35, 273-281 (1996).
12. Xu G., Yu H., Hong J., Stahl M., McDonagh T., Kay L. E., Cumming D. A., J. Mol. Biol., 268, 468-481 (1997).
13. Go N., Noguti T. , Nishikawa T., Proc. Natl. Acad. Sci., 80, 3696-3700 (1983).
14. Nishikawa T., Go N., Proteins., 2, 308-329 (1987).
15. Weiner S. J., Kollman P. A., Case D. A., Singh U. C., Ghio C., Alagona G., Profeta S. J., Weiner P., J. Am. Chem. Soc., 106, 765-784 (1984).
16. Kamiya K., Umeyama H., 19th Kozo Kassei Soukan Symposium, 1991, 308.
17. Wako H., Tachikawa M., Ogawa A., Proteins., 26, 72-80 (1996).
18. Tsutsui Y., Wasada H., Chem. Lett., 1995, 517-518.
19. Hayward S., Kitao A., Berendsen H. J. C., Proteins., 27, 425-437 (1997).
20. Kraulis P. J., J. App. Crystallography, 24, 946-950 (1991).
21. Hamuro J., "Interlukin Network - Molecular Mechanism of Host Difference System - ," Kodansya Scientific, Tokyo, 1992, p. 263.
22. Young C. D., Hangjun Z., Qi-Lin C., Jinzhao H., Matthews J. D., Protein Sci., 6, 1228-1236 (1997).
23. Ikura T., Go N., Proteins, 16, 423-436 (1993).
24. Tjandra N., Grzesiek S., Bax A., J. Am. Chem. Soc., 118, 6264-6272 (1996).
25. Tolman J. R., Flanagan J. M., Kennedy M. A., Prestegard J. H., Nature Struct. Biol., 4, 292-297 (1996).