Monitoring for induced heritable mutations in natural populations: Application of minisatellite DNA screening

Mutation Research - Reviews in Mutation Research

Volumn 411, Issue 1, 1998, Pages 1-10

  Yauk, Carole ^a  

^a MCMASTER UNIVERSITY   (Canada)

Author keywords

Biomarker; Genotoxicology; Heritable mutation; Minisatellite DNA

Indexed keywords

DNA MINISATELLITE; ENVIRONMENTAL MUTAGEN;

DNA FINGERPRINTING; GENE MUTATION; GENOTOXICITY; HERITABILITY; HUMAN; MUTATION RATE; NUCLEAR ACCIDENT; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REVIEW;

EID: 0031854557     PISSN: 13835742     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1383-5742(98)00003-9     Document Type: Article

References (65)

1. B.N. Ames, J. McCann, E. Yamasaki, Methods for detecting carcinogens and mutagens with the Salmonella/ mammalian-microsome mutagenicity test, Mutation Res. 31 (1975) 347-364.
2. D.M. Maron, B.N. Ames, Revised methods for the Salmonella mutagenicity test, Mutation Res. 113 (1983) 173-215.
3. D.M. DeMarini, Induction of mutation spectra by complex mixtures: approaches, problems and possibilities, Environ. Health Perspect. 102 (sup. 4) (1994) 127-138.
4. C.H. Marvin, L. Allan, B.E. McCarry, D.W. Bryant, Chemico/biological investigation of contaminated sediments from the Hamilton Harbour area of western Lake Ontario, Environ. Mol. Mutagen. 22 (2) (1993) 61-70.
5. D.C. Malins, S. Gunselman, Fourier-transform infrared spectroscopy and gas chromatography-mass spectrometry reveal a remarkable degree of structural damage in the DNA of wild fish exposed to toxic chemicals, Proc. Natl. Acad. Sci. U.S.A. 91 (26) (1994) 13038-13041.
6. P.A. Schilderman, J.A. Hoogewerff, F. van Schooten, L.M. Maas, E.J. Moonen, B.J. van Os, J.H. van Wijnen, J.C. Kleinjans, Possible relevance of pigeons as an indicator species for monitoring air pollution, Environ. Health Perspect. 105 (3) (1997) 322-330.
7. F.P. Perera, K. Hemminki, E. Gryzbowska, G. Motykiewicz, J. Michalska, R.M. Santella, T. Young, C. Dickey, P. Brandt-Rauf, I. DeVivo, W. Blaners, W. Tsai, M. Chorazy, Molecular and genetic damage in humans from environmental pollution in Poland, Nature 360 (1992) 256-258.
8. L. Calderón-Garcidueñas, N. Osnaya-Brizuela, L. Ramirez-Martinez, A. Villarreal-Calderón, DNA strand breaks in human nasal respiratory epithelium are induced upon exposure to urban pollution, Environ. Health Perspect. 104 (2) (1996) 160-168.
9. D.W. Sugg, R.K. Chesser, J.A. Brooks, T.T. Grasman, The association of DNA damage to concentrations of mercury and radiocesium in largemouth bass, Environ. Toxicol. Chem. 14 (4) (1995) 661-668.
10. A.T. Natarajan, J.J. Beoi, F. Darroudi, P.C. Van Diemen, F. Dulout, M.P. Hande, A.T. Ramalho, Current cytogenetic methods for detecting exposure and effects of mutagens and carcinogens, Environ. Health Perspect. 104 (Suppl. 3) (1996) 445-448.
11. M. Hakoda, M. Akiyama, S. Kyoizumi, A.A. Awa, M. Yamakido, M. Otake, Increased somatic cell frequency in atomic bomb survivors, Mutation Res. 201 (1) (1988) 39-48.
12. A.D. da Cruz, J. Curry, M.P. Curado, B.W. Glickman, Monitoring hprt mutant frequency over time in T-lymphocytes of people accidentally exposed to high doses of ionizing radiation, Environ. Mol. Mutagen. 27 (3) (1996) 165-175.
13. R.F. Branda, J.P. O'Neill, L.M. Sullivan, R.J. Albertini, Factors influencing mutation at the hprt locus in T-lymphocytes: women treated for breast cancer, Cancer Res. 51 (24) (1991) 6603-6607.
14. J.L. Dempsey, R.S. Seshadri, A.A. Morley, Increased mutation frequency following treatment with cancer chemotherapy, Cancer Res. 45 (6) (1985) 2873-2877.
15. A.D. Tates, T. Grummt, M. Tornqvist, P.B. Farmer, F.J. van Dam, H. van Mossel, H.M. Schoemaker, S. Osterman-Golkar, C. Uebel, Y.S. Tang, A.H. Zwinderman, A.T. Natarajan, L. Ehrenberg, Biological and chemical monitoring of occupational exposure to ethylene oxide, Mutation Res. 250 (1-2) (1991) 483-497.
16. E. Huttner, U. Mergner, R. Braun, J. Schoneich, Increased frequency of 6-thioguanine-resistant lymphocytes in peripheral blood of workers employed in cyclophosphamide production, Mutat. Res. 243 (2) (1990) 101-107.
17. R.J. Baker, R.A. Van Den Bussche, A.J. Wright, L.E. Wiggins, M.J. Hamilton, E.P. Reat, M.H. Smith, M.D. Lomakin, R.K. Chesser, High levels of genetic change in rodents of Chernobyl, Nature 380 (1996) 707-708.
18. T.D. Kocher, W.K. Thomas, A. Meyer, S.V. Edwards, S. Pääbo, F.X. Villablanca, A.C. Wilson, Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers, Proc. Natl. Acad. Sci. U.S.A. 86 (1989) 6196-6200.
19. D.M. Irwin, T.D. Kocher, A.C. Wilson, Evolution of the cytochrome b gene of mammals, J. Mol. Evol. 32 (1991) 128-144.
20. L. Vawter, W.M. Brown, Nuclear and mitochondrial DNA comparisons reveal extreme rate variation in the molecular clock, Science 234 (1986) 194-195.
21. J.A. Allen, M.M. Coombs, Covalent binding of polycyclic aromatic compounds to mitochondrial and nuclear DNA, Nature 287 (1980) 244-245.
22. M.C. MacLeod, Interaction of bulky chemical carcinogens with DNA in chromatin, Carcinogenesis 16 (9) (1995) 2009-2014.
23. V.A. Boehr, Gene-specific damage and repair of DNA adducts and cross-links, in: K. Hemminki, A. Dipple, D.E.G. Shuker, F.F. Kadlubar, D. Segerbäck, H. Bartsch (Eds.), DNA Adducts: Identification and Biological Significance, International Commission for Protection Against Environmental Mutagens and Carcinogens, Scientific Publications no. 125, 1994, pp. 361-369.
24. H.A. Coller, W.G. Thilly, Development and application of mutational spectra technology, Environ. Sci. Technol. 28 (11) (1994) 478-487.
25. B. Lambert, B. Andersson, T. Bastlova, S. Hou, D. Hellgren, A. Kolman, Mutations induced in the hypoxanthine phosphoribosyl transferase gene by three urban air pollutants: acetaldehyde, benzo[a]pyrene diolepoxide and ethylene oxide, Environ. Health Perspect. 102 (Suppl. 4) (1994) 135-138.
26. B. Vogelstein, K.W. Kinzler, Carcinogens leave fingerpints (news), Nature 355 (1992) 209-210.
27. A.J. Jeffreys, N.J. Royle, V. Wilson, Z. Wong, Spontaneous mutation rates to new length alleles at tandem-repetitive hypervariable loci in human DNA, Nature 332 (1988) 278-281.
28. A.J. Jeffreys, V. Wilson, S.L. Thein, Hypervariable 'minisatellite' regions in human DNA, Nature 314 (1985) 67-73.
29. A.J. Jeffreys, K. Tamaki, A. MacLeod, D.G. Monckton, D.L. Neil, J.A.L. Armour, Complex gene conversion events in germline mutation at human minisatellites, Nat. Genet. 6 (2) (1994) 136-145.
30. G. Vergnaud, D. Mariat, F. Apiou, A. Aurias, M. Lathrop, V. Lauthier, The use of synthetic tandem repeats to isolate new VNTR loci-cloning of a human hypermutable sequence, Genomics 11 (1) (1991) 135-144.
31. K.E. Bendall, V.A. Macaulay, J.R. Baker, B.C. Sykes, Heteroplasmic point mutations in the human mtDNA control region, Am. J. Hum. Genet. 59 (1996) 1276-1287.
32. M.D. Shelby, J.B. Bishop, J.M. Mason, K.R. Tindall, Fertility, reproduction, and genetic disease: studies on the mutagenic effect of environmental agents on mammalian germ cells, Environ. Health Perspect. 100 (1993) 283-291.
33. Y.E. Dubrova, V.N. Nesterov, N.G. Krouchinsky, V.A. Ostapenko, R. Neumann, D.L. Neil, A.J. Jeffreys, Human minisatellite mutation rate after the Chernobyl accident, Nature 380 (1996) 683-686.
34. Y.E. Dubrova, V.N. Nesterov, N.G. Krouchinsky, V.A. Ostapenko, G. Vergnaud, F. Giraudeau, J. Buard, A.J. Jeffreys, Further evidence for elevated human minisatellite mutation rate in Belarus eight years after the Chernobyl accident, Mutation Res. 381 (1997) 267-278.
35. C.L. Yauk, J.S. Quinn, Multilocus DNA fingerprinting reveals high rate of heritable genetic mutation in herring gulls nesting in an industrialized urban site, Proc. Natl. Acad. Sci. U.S.A. 93 (1996) 12137-12141.
36. C.A. May, A.J. Jeffreys, J.A.L. Armour, Mutation rate heterogeneity and the generation of allele diversity at the human minisatellite MS205 (D16S309), Human Mol. Genet. 5 (11) (1996) 1823-1833.
37. A.J. Jeffreys, R. Neumann, V. Wilson, Repeat unit sequence variation in minisatellites: a novel source of DNA polymorphism for studying variation and mutation by single molecule analysis, Cell 60 (3) (1990) 473-485.
38. J. Buard, G. Vergnaud, Complex recombination events at the hypermutable minisatellite CEB1 (D2S90), EMBO J. 13 (13) (1994) 3203-3210.
39. S. Sadomoto, S. Suzuki, K. Kamiya, R. Kominami, D. Dohi, O. Niwa, Radiation induction of germline mutation at a hypervariable mouse minisatellite, Int. J. Radiat. Biol. 65 (5) (1994) 549-557.
40. A. Collick, A.J. Jeffreys, Detection of a novel minisatellite-specific DNA binding protein, Nucl. Acids Res. 18 (3) (1990) 625-629.
41. G.A. Shinder, S. Manam, B.J. Ledwith, W.W. Nichols, Minisatellite DNA-binding proteins in mouse brain, liver and kidney, Exp. Cell Res. 213 (1994) 107-112.
42. H. Nakagama, S. Kaneko, H. Shima, I. Hideaki, H. Fukuda, R. Kominami, T. Sugimura, M. Nagao, Induction of minisatellite mutation in NIH 3T3 cells by treatment with the tumor promoter okadaic acid, Proc. Natl. Acad. Sci. U.S.A. 94 (1997) 10813-10816.
43. M. Suganuma, H. Fujiki, H. Suguri, S. Yoshizawa, M. Hirota, M. Nakayasu, M. Ojika, K. Wakamatsu, K. Yamada, T. Sugimura, Okadaic acid - an additional non-phorbol-12-tetradecanoate-13-acetate-type tumor promoter, Proc. Natl. Acad. Sci. U.S.A. 85 (1988) 1768-1771.
44. C. Bialojan, A. Takai, Inhibitory effect of a marine-sponge toxin, okadaic acid, on protein phosphatases-specificity and kinetics, Biochem. J. 256 (1988) 283-290.
45. N.D. Brewis, A.J. Street, A.R. Prescott, P.T. Cohen, PPX, a novel protein serine/threonine phosphatase localized to centromeres, EMBO J. 12 (1993) 987-996.
46. M. Honma, E. Kataoka, K. Ohnishi, T. Kikuno, M. Hayashi, T. Sofuni, H. Mizusawa, Detection of recombinational mutations in cultured human cells by Southern blot analysis with minisatellite DNA probes, Mutation Res. 286 (2) (1993) 165-172.
47. J.J. White, H. Neuwirth, C.D. Miller, E.L. Schneider, DNA alterations in prostatic adenocarcinoma and benign prostatic hyperplasia: detection by DNA fingerprint analyses, Mutat. Res. 237 (1) (1990) 37-43.
48. J.A. Armour, I. Patel, S.L. Thein, M.F. Fey, A.J. Jeffreys, Analysis of somatic mutations at human minisatellite loci in tumors and cell lines, Genomics 4 (3) (1989) 328-334.
49. E.M. Boltz, P. Harnett, J. Leary, R. Houghton, R.F. Kefford, M.L. Friedlander, Demonstration of somatic rearrangements and genomic heterogeneity in human ovarian cancer by DNA fingerprinting, Br. J. Cancer 62 (1) (1990) 23-27.
50. S.L. Thein, A.J. Jeffreys, H.C. Gooi, F. Cotter, J. Flint, N.T. O'Connor, D.J. Weatherall, J.S. Wainscoat, Detection of somatic changes in human cancer DNA by DNA fingerprint analysis, Br. J. Cancer 55 (4) (1987) 353-356.
51. T. Kitazawa, R. Kominami, R. Tanaka, K. Wakabayashi, M. Nagao, 2-Hydroxyamino-1-methyl-6-phenylimidazo[4,5-b] pyridine induction of recombinational mutations in mammalian cell lines as detected by DNA fingerprinting, Mol. Carcinog. 9 (2) (1994) 67-70.
52. S. Ogheri, C. Rampazzo, L. Celotti, Mutagenic effects at hprt locus and in minisatellite sequences induced in V79 cells by treatment with UV and methyl-nitro-nitroso-guanidine, Mutat. Res. 348 (4) (1995) 193-199.
53. D.M. Hilis, Life in the hot zone around Chernobyl, Nature 380 (1996) 665-666.
54. D.G. Monckton, R. Neumann, T. Guram, N. Fretwell, K. Tamaki, A. MacLeod, A.J. Jeffreys, Minisatellite mutation rate variation associated with a flanking DNA sequence polymorphism, Nat. Genet. 8 (1994) 162-170.
55. M. Kodaira, C. Chiyoko, K. Hiyama, K. Toyama, Lack of effects of atomic bomb radiation on genetic instability of tandem-repetitive elements in human germ cells, Am. J. Hum. Genet. 57 (1995) 1275-1283.
56. A.D. Weinberg, S. Kripalani, P.L. McCarthy, W.J. Schull, Caring for survivors of the Chernobyl disaster - What the clinician should know, J. Am. Med. Assoc. 274 (5) (1995) 408-412.
57. Y.E. Dubrova, A.J. Jeffreys, A.M. Malashenko, Mouse minisatellite mutations induced by ionizing radiation, Nat. Genet. 5 (1) (1993) 92-94.
58. Y.J. Fan, A. Wang, S. Sadomoto, K. Kamiya, R. Kominami, O. Niwa, Germline mutation of a hypervariable mouse minisatellite locus induced by ionizing radiation, J. Radiat. Res. 35 (1994) 285.
59. E.B. Brown, J.D. Brain, N. Wang, The avian respiratory system: a unique model for studies of respiratory toxicosis and for monitoring air quality, Environ. Health Perspect. 105 (2) (1997) 188-200.
60. J.H. Wetton, R.E. Carter, D.T. Parkin, D. Walters, Demographic study of a wild house sparrow population by DNA fingerprinting, Nature 327 (1987) 147-149.
61. T.G. Krontiris, B. Devlin, D.D. Karp, N.J. Robert, N. Risch, An association between the risk of cancer and mutations in the HRAS1 minisatellite locus, New Engl. J. Med. 329 (8) (1993) 517-523.
62. S.T. Bennett, A.M. Lucassen, S.C.L. Gough, E.E. Powell, D.E. Undlien, L.E. Pritchard, M.E. Merriman, Y. Kawaguchi, M.J. Dronsfield, F. Pociot, J. Nerup, N. Bouzekri, A. Cambon-Thomsen, K.S. Rønningen, A.H. Barnett, S.C. Bain, J.A. Todd, Susceptibility to human type 1 diabetes at IDDM2 is determined by tandem repeat variation at the insulin gene minisatellite locus, Nat. Genet. 9 (1995) 284-292.
63. P. Vafiadis, S.T. Bennett, J.A. Todd, J. Nadeau, R. Grabs, C.G. Goodyer, S. Wickramasinghe, E. Colle, C. Polychronankos, Insulin expression in human thymus is modulated by the INS VNTR alleles at the IDDM2 locus, Nat. Genet. 15 (1997) 289-292.
64. A. Heils, A. Teufel, S. Petri, G. Stöber, P. Riederer, D. Bengel, K.P. Lesch, Allelic variation of human serotonin transporter gene expression, J. Neurochem. 66 (6) (1996) 2621-2624.
65. R.G. Lafrenière, D.L. Rocherfort, N. Chretien, J.H. Rommens, F.I. Cochius, R. Kälviäinen, U. Nousiainen, G. Patry, K. Farrell, B. Söderfeldt, A. Federico, B.R. Hale, O.H. Cossio, T. Sorensen, M.A. Pouliot, T. Kmiec, P. Uldall, J. Janszky, M.R. Pranzatelli, F. Andermann, E. Andermann, G.A. Rouleau, Unstable insertion in the 5′ flanking region of the cysplatin B gene is the most common mutation in progressive myoclonus epilepsy type 1, EPM1, Nat. Genet. 15 (1997) 298-302.