Variation in the ribosomal DNA internal transcribed spacer of a diverse collection of ectomycorrhizal fungi

Mycological Research

Volumn 102, Issue 7, 1998, Pages 859-865

  Farmer, David J ^a   Sylvia, David M ^a  

^a UNIVERSITY OF FLORIDA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ECTOMYCORRHIZA; EXTRACTION; FUNGUS; GENE AMPLIFICATION; IDENTIFICATION; INTERNAL TRANSCRIBED SPACER; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RIBOSOMAL DNA; RIBOSOMAL RNA; TAXONOMY;

CENOCOCCUM GEOPHILUM; PISOLITHUS ARHIZUS;

EID: 0031847314     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756297005601     Document Type: Article

References (34)

1. Agerer, R. (1990). Is there a correlation between the abundance of ectomycorrhizae and the abundance of their fruitbodies? Zeitschrift für Mykologie 56, 155-158.
2. Baura, G., Szaro, T. M. & Bruns, T. D. (1992). Gastrosuillus laricinus is a recent derivative of Suillus grevillei: molecular evidence. Mycologia 84, 592-597.
3. Bruns, T. D. & Gardes, M. (1993). Molecular tools for the identification of ectomycorrhizal fungi-taxon-specific oligonucleotide probes for suilloid fungi. Molecular Ecology 2, 233-242.
4. Bruns, T. D., White, T. J. & Taylor, J. W. (1991). Fungal molecular systematics. Annual Review of Ecology and Systematics 22, 525-564.
5. Burgess, T., Malajczuk, N. & Dell, B. (1995). Variation in Pisolithus based on basidiome and basidiospore morphology, culture characteristics and analysis of polypeptides using 1D SDS-PAGE. Mycological Research 99, 1-13.
6. Chen, W., Hoy, J. W. & Schneider, R. W. (1992). Species-specific polymorphisms in transcribed ribosomal DNA of five Pythium species. Experimental Mycology 16, 22-34.
7. Danielson, R. M. (1984). Ectomycorrhizal association in jack pine stands in northeastern Alberta. Canadian Journal of Botany 62, 932-939.
8. Egger, K. N. (1995). Molecular analysis of ectomycorrhizal fungal communities. Canadian Journal of Botany 73, S1415-S1422.
9. Egger, K. N. & Sigler, L. (1993). Relatedness of the ericoid endophytes Scytalidium vaccinii and Hymenoscuphus ericae inferred from analysis of ribosomal DNA. Mycologia 85, 219-230.
10. Erland, S., Henrion, B., Martin, F., Glover, L. A. & Alexander I. J. (1994). Identification of the ectomycorrhizal basidiomycete Tylospora fibrillosa Donk by RFLP analysis of the PCR-amplified ITS and IGS regions of ribosomal DNA. New Phytologist 126, 525-532.
11. Feibelman, T., Bayman, P. & Cibula, W. G. (1994). Length variation in the internal transcribed spacer of ribosomal DNA in chanterelles. Mycological Research 98, 614-618.
12. Felsenstein, J. (1993) PHYLIP (Phylogenetic Inference Package), version 3.5c.
13. Gardes, M. & Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes - applications to the identification of mycorrhizae and rusts. Molecular Ecology 2, 113-118.
14. Gardes, M. & Bruns, T. D. (1996a). Community structure of ectomycorrhizal fungi in a Pinus muricata forest: above-and below-ground views. Canadian Journal of Botany 74, 1572-1583.
15. Gardes, M. & Bruns, T. D. (1996b). ITS-RFLP matching for identification of fungi. In Methods in molecular ecology (ed. J. Clapp), pp. 177-186. Humana Press, Inc.: Totowa, NJ.
16. Gardes, M., White, T. J., Fortin, J. A., Bruns, T. D. & Taylor, J. W. (1991). Identification of indigenous and introduced symbiotic fungi in ectomycorrhizae by amplification of nuclear and mitochondrial ribosomal DNA. Canadian Journal of Botany 69, 180-190.
17. Harley, J. L. & Smith, S. E. (1983). Mycorrhizal Symbiosis. Academic Press: NY.
18. Henrion, B., LeTacon, F. & Martin, F. (1992). Rapid identification of genetic variation of ectomycorrhizal fungi by amplification of ribosomal RNA genes. New Phytologist 122, 289-298.
19. Henrion, B., Chevalier, G. & Martin, F. (1994). Typing truffle species by PCR amplification of the ribosomal DNA spacers. Mycological Research 98, 37-43.
20. Hibbett, D. S. & Vilgalys, R. (1991). Evolutionary relationships of Lentinus to the Polyporaceae: evidence from restriction analysis of enzymatically amplified ribosomal DNA. Mycologia 83, 425-439.
21. Kohn, L. (1992). Developing new characters for fungal systematics: an experimental approach for determining the rank of resolution. Mycologia 84, 139-153.
22. Kope, H. H. & Fortin, J. A. (1990). Germination and comparative morphology of basidiospores of Pisolithus arhizus. Mycologia 82, 350-357.
23. Lee, S. B. & Taylor, J. W. (1992). Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA. Molecular Biology and Evolution 9, 636-653.
24. Li, C. Y. & Castellano, M. A. (1987). Azospirillum isolated from within sporocarps of the mycorrhizal fungi: Hebeloma, Laccaria, and Rhizopogon. Transactions of the British Mycological Society 88, 563-564.
25. Lobuglio, K. F., Rogers, S. O. & Wang, C. J. K. (1991). Variation in ribosomal DNA among isolates of the mycorrhizal fungus Cenococcum geophilum. Canadian Journal of Botany 2331-2343.
26. Marx, D. H. & Artman, J. D. (1978). Growth and ectomycorrhizal development of loblolly pine seedlings in nursery soil infested with Pisolithus tinctorius and Thelephora terrestris in Virginia. USDA Forest Service Research Note SE-256, 1-4 pp.
27. Molina, R. & Palmer, J. (1982). Isolation, maintenance, and pure culture manipulation of ectomycorrhizal fungi. In Methods and Principles of Mycorrhizal Research (ed. N. C. Schenck), pp. 118-125. The American Phytopathological Society: St Paul, MN.
28. O'Donnell, K. (1992). Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum. Current Genetics 22, 213-220.
29. Polglase, P. J., Jokela, E. J. & Comerford, N. B. (1992). Phosphorus, nitrogen, and carbon fractions in litter and soil of southern pine plantations. Soil Science Society America Journal 56, 566-572.
30. Rogers, S. O., Yan, Z. H., Shinohara, M., Lobuglio, K. F. & Wang, C. J. K. (1993). Messenger RNA intron in the nuclear 18s ribosomal RNA gene of deuteromycetes. Current Genetics 23, 338-342.
31. Rousseau, J. V. D., Sylvia, D. M. & Fox, A. J. (1994). Contribution of ectomycorrhiza to the potential nutrient-absorbing surface of pine. New Phytologist 128, 639-644.
32. Stoyke, G., Egger, K. N. & Currah, R. S. (1992). Characterization of sterile endophytic fungi from the mycorrhizae of subalpine plants. Canadian Journal of Botany 70, 2009-2016.
33. White, T. J., Bruns, T. D., Lee, S. & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (ed. M. A. Innis), pp. 315-322. Academic Press, Inc.: San Diego.
34. Wilcox, H. E. (1983). Fungal parasitism of woody plant roots from mycorrhizal relationships to plant disease. Annual Review of Phytopathology 21, 221-242.