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Volumn 14, Issue 5, 1998, Pages 439-451

Computational space reduction and parallelization of a new clustering approach for large groups of sequences

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; DATA BASE; GENOME; INTERNET; MEMORY; PRIORITY JOURNAL; PROTEIN FAMILY; SEQUENCE ANALYSIS; SPACE;

EID: 0031829104     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/14.5.439     Document Type: Article
Times cited : (20)

References (14)
  • 1
    • 0024297354 scopus 로고
    • Multiple sequence alignments with hierarchical clustering
    • Corpet, F. (1988) Multiple sequence alignments with hierarchical clustering. Nucleic Acids Res., 16, 10881-10890.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 10881-10890
    • Corpet, F.1
  • 4
    • 0026656815 scopus 로고
    • Exhaustive matching of the entire protein sequence data base
    • Gonnet, G.H., Cohen, M.A. and Benner, S.A. (1992) Exhaustive matching of the entire protein sequence data base. Science, 256, 1443-1445.
    • (1992) Science , vol.256 , pp. 1443-1445
    • Gonnet, G.H.1    Cohen, M.A.2    Benner, S.A.3
  • 5
    • 0027210418 scopus 로고
    • Optimal alignment between groups of sequences and its application to multiple sequence alignment
    • Gotoh, O. (1993) Optimal alignment between groups of sequences and its application to multiple sequence alignment. Comput. Applic. Biosci., 9, 361-370.
    • (1993) Comput. Applic. Biosci. , vol.9 , pp. 361-370
    • Gotoh, O.1
  • 6
    • 0028205447 scopus 로고
    • Enlarged representative set of protein structures
    • Hobohm, U. and Sander, C. (1994) Enlarged representative set of protein structures. Protein Sci., 3, 522-524.
    • (1994) Protein Sci. , vol.3 , pp. 522-524
    • Hobohm, U.1    Sander, C.2
  • 8
    • 0027157846 scopus 로고
    • Building multiple alignments from pairwise alignments
    • Miller, W. (1993) Building multiple alignments from pairwise alignments. Comput. Applic. Biosci., 9 169-176.
    • (1993) Comput. Applic. Biosci. , vol.9 , pp. 169-176
    • Miller, W.1
  • 9
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman, S.B. and Wunsch, C.D. (1970) A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol., 48, 443-453.
    • (1970) J. Mol. Biol. , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 10
    • 0026030641 scopus 로고
    • Data base of homology derived protein structures and the structural meaning of sequence alignment
    • Sander, C. and Schneider, R. (1991) Data base of homology derived protein structures and the structural meaning of sequence alignment. Proteins, 9 56-68.
    • (1991) Proteins , vol.9 , pp. 56-68
    • Sander, C.1    Schneider, R.2
  • 11
    • 0029960050 scopus 로고    scopus 로고
    • The HSSP data base of protein structure-sequence alignments
    • Schneider, R. and Sander, C. (1996) The HSSP data base of protein structure-sequence alignments, Nucleic Acids Res., 24, 201-205.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 201-205
    • Schneider, R.1    Sander, C.2
  • 13
    • 84968437890 scopus 로고
    • Mapping strategies for sequential sequence comparison algorithms on LAN-based message passing architectures
    • Springer-Verlag, Berlin
    • Trelles, O. Zapata, E.L. and Carazo, J.M. (1994a) Mapping strategies for sequential sequence comparison algorithms on LAN-based message passing architectures. Lecture Notes in Computer Science. Vol. 796. HPCN.94. Springer-Verlag, Berlin, pp. 197-202.
    • (1994) Lecture Notes in Computer Science. Vol. 796. HPCN.94 , vol.796 , pp. 197-202
    • Trelles, O.1    Zapata, E.L.2    Carazo, J.M.3
  • 14
    • 0027997806 scopus 로고
    • On an efficient parallelization of exhaustive sequence comparison algorithms on message passing architectures
    • Trelles, O., Zapata, E.L. and Carazo, J.M. (1994b) On an efficient parallelization of exhaustive sequence comparison algorithms on message passing architectures. Comput. Applic. Biosci., 10, 509-511.
    • (1994) Comput. Applic. Biosci. , vol.10 , pp. 509-511
    • Trelles, O.1    Zapata, E.L.2    Carazo, J.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.