RAPD analysis of three Alternaria species pathogenic to crucifers

Mycological Research

Volumn 102, Issue 7, 1998, Pages 807-814

  Sharma, T R ^a   Tewari, J P ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CANADA; CULTURE TECHNIQUE; FRANCE; GENE AMPLIFICATION; GENETIC VARIATION; GENOMIC DNA; ISOLATION PROCEDURE; NUCLEOTIDE SEQUENCE; PATHOGENESIS; PATHOGENICITY; RANDOM AMPLIFIED POLYMORPHIC DNA; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

ALTERNARIA BRASSICAE; ALTERNARIA BRASSICICOLA; ALTERNARIA RAPHANI;

EID: 0031821722     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756297005479     Document Type: Article

References (31)

1. Arnau, J., Housego, A. P. & Oliver, R. P. (1995). The use of RAPD markers in the genetic analysis of the plant pathogen fungus Cladosporium fulvum. Current Genetics 25, 438-444.
2. Botstein, D., White, R. L., Skolnick, M. H. & Davis, R. W. (1980). Construction of a genetic map in man using restriction fragment length polymorphisms. American Journal of Human Genetics 32, 314-331.
3. Crowhurst, R. N., Hawthorne, B. T., Rikkerink, E. H. A. & Templeton, M. D. (1991). Differentiation of Fusarium solani f. sp. cucurbitae races 1 and race 2 by random amplification of polymorphic DNA. Current Genetics 20, 391-396.
4. Degenhardt, K.J., Skoropad, W. P. & Kondra, Z. P. (1974). Effects of Alternaria black spot on yield, oil content and protein content of rapeseed. Canadian Journal of Plant Science 54, 795-799.
5. Dobrowolski, M. P. & O'Brien, P. A. (1993). Use of RAPD-PCR to isolate a species-specific DNA probe for Phytophthora cinnamomi. FEMS-Microbiology Letters 113, 43-48.
6. Duncan, S., Barton, J. E. & O'Brien, P. A. (1993). Analysis of variation in isolates of Rhizoctonia solani by random amplified polymorphic DNA assay. Mycological Research 97, 1075-1082.
7. Flor, H. H. (1971). Current status of gene-for-gene hypothesis. Annual Review of Phytopathology 9, 275-295.
8. Goodwin, P. H. & Annis, S. L. (1991). Rapid identification of genetic variation and pathotype of Leptosphaeria maculans by random amplified polymorphic DNA assay. Applied and Environmental Microbiology 57, 2482-2486.
9. Huff, D. R., Bunting, T. E. & Plumley, K. R. (1994). Use of random amplified polymorphic DNA markers for the detection of genetic variation in Magnaporthe poae. Phytopathology 84, 1312-1316.
10. Jasalavich, C. A., Morales, V. M., Pelcher, L. E. & Séguin-Swartz, G. (1995). Comparison of nuclear ribosomal DNA sequences from Alternaria species pathogenic to crucifers. Mycological Research 99, 604-614.
11. Kelley, A., Alcalá-Jiménez, A. R., Heale, B. W., Artés, J. B. & Jiménez-Díaz, R. M. (1994). Use of genetic fingerprinting and random amplified polymorphic DNA to characterize pathotypes of Fusarium oxysporum f. sp. ciceris infecting chickpea. Phytopathology 84, 1293-1298.
12. Kolte, S. J. (1985). Diseases of Annual Edible Oilseed Crops, vol. II. Rapeseed-Mustard and Sesame Diseases. CRC Press: Boca Raton, FL, U.S.A.
13. Lanfranco, L., Wyss, P., Marzachi, C. & Bonfante, P. (1993). DNA probes for identification of the ectomycorrhizal fungus Tuber magnatum Pico. FEMS-Microbiology Letters 114, 245-252.
14. Lui, Z. L. & Sinclair, J. B. (1992). Genetic diversity of Rhizoctonia solani anastomosis group 2. Phytopathology 82, 778-787.
15. Maclean, D. J., Braithwaite, K. S., Manners, J. M. & Irwin, J. A. G. (1993). How do we identify and classify fungal plant pathogens in the era of DNA analysis? Advances in Plant Pathology 10, 208-244.
16. Mordue, J. E. M., Currah, R. S. & Bridge, P. D. (1989). An integrated approach to Rhizoctonia taxonomy: cultural, biochemical and numerical techniques. Mycological Research 92, 78-90.
17. Ouellet, T. & Seifert, K. A. (1993). Genetic characterization of Fusarium graminearum strains using RAPD and PCR amplification. Phytopathology 83, 1003-1007.
18. Raeder, U. & Broda, P. (1985). Rapid preparation of DNA from filamentous fungi. Letters in Applied Microbiology 1, 17-20.
19. Rao, V. G. (1969). The genus Alternaria from India. Nova Hedwigia 17, 219-258.
20. Rohlf, F. J. (1988). NTSYS-pc: Numerical Taxonomy and Multivariate Analysis System. Version 1.80. Exeter Software: Setauket, NY.
21. Rossman, A. Y., Palm, M. E. & Spielman, L. J. (1987). A Literature Guide for the Identification of Plant Pathogenic Fungi. APS Press: St Paul, MN, U.S.A.
22. Saiki, R. K., Gelfand, D. H., Stoffel, S., Scharf, S., Higuchi, R. H., Horn, G. T., Mullis, K. B. & Erlich, H. A. (1985) Primer directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239, 487-492.
23. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press: Cold Spring Harbor, NY, U.S.A.
24. Schleier, S., Voigt, K. & Wostemeyer, J. (1997). RAPD-based molecular diagnosis of mixed fungal infections on Oilseed rape (Brassica napus): evident for genus-and species-specific sequences in the fungal genomes. Journal of Phytopathology 145, 81-87.
25. Sharma, T. R. & Tewari, J. P. (1995). Detection of genetic variation in Alternaria brassicae by RAPD fingerprints. Journal of Plant Biochemistry and Biotechnology 4, 105-107.
26. Tewari, J. P. (1991). Structural and biochemical bases of the blackspot disease of crucifers. Advances in Structural Biology 1, 325-349.
27. Verma, P. R. & Saharan, G. S. (1994). Monograph on Alternaria Diseases of Crucifers. Saskatoon Research Centre Technical Bulletin 1994-6E, Agriculture and Agri-Food Canada: Saskatoon, SK, Canada.
28. Walsh, J. & McClelland, M. (1990). Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Research 18, 7213-7218.
29. Weising, K., Nybom, H., Wolff, K. & Meyer, W. (1995). DNA Fingerprinting in Plants and Fungi. CRC Press: Boca Raton, FL, U.S.A.
30. Weiss, E. A. (1983). Oilseed Crops. Longman Inc.: New York, U.S.A.
31. Williams, J. G. K., Kubelik, A. R., Lavak, K. J., Rafalski, J. A. & Tingey, S. V. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18, 6531-6535.