Naturally occurring variants of satellite tobacco mosaic virus

Phytopathology

Volumn 88, Issue 6, 1998, Pages 514-519

  Mathews, D M ^a   Dodds, J A ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIGENICITY; ASSAY; COMPLEMENTARY DNA; DOUBLE STRANDED DNA; ELECTROPHORESIS; GENOME; INOCULATION; PLANT VIRUS; SINGLE STRANDED DNA; TOBACCO; VIRION;

NICOTIANA OBTUSIFOLIA; NICOTIANA TABACUM; SATELLITE TOBACCO MOSAIC VIRUS; TOBACCO MOSAIC VIRUS;

EID: 0031800198     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO.1998.88.6.514     Document Type: Article

References (24)

1. Ausubet, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., and Struhl, K. 1987. Preparation and analysis of RNA. Pages 4.9.1-4.9.4 in: Current Protocols in Molecular Biology. John Wiley & Sons, New York.
2. Avila-Rincon, M. J., Collmer, C. W., and Kaper, J. M. 1986. In vitro translation of cucomoviral satellites. II. CARNA 5 from cucumber mosaic virus strain S and SP6 transcripts of cloned (S)CARNA 5 cDNA produce electrophoretically comigrating protein products. Virology 152: 455-458.
3. Collmer, C. W., and Kaper, J. M. 1988. Site-directed mutagenesis of potential protein-coding regions in expressible cloned cDNAs of cucumber mosaic viral satellites. Virology 163:293-298.
4. Garcia-Arenal, F., Zaitlin, M., and Palukaitis, P. 1987. Nucleotide sequence analysis of six satellite RNAs of cucumber mosaic virus: Primary sequence and secondary structure alterations do not correlate with differences in pathogenicity. Virology 158:339-347.
5. Jaegle, M., Devic, M., Longstaff, M., and Baulcombe, D. 1990. Cucumber mosaic virus satellite RNA (Y strain): Analysis of sequences which affect yellow mosaic symptoms on tobacco. J. Gen. Virol. 71:1905-1912.
6. Koszelak, S., Dodds, J. A., and McPherson, A. 1989. Preliminary analysis of crystals of satellite tobacco mosaic virus. J. Mol. Biol. 209:323-325.
7. Kurath, G., and Dodds, J. A. 1994. Satellite tobacco mosaic virus sequence variants with only five nucleotide differences can interfere with each other in a cross protection-like phenomenon in plants. Virology 202: 1065-1069.
8. Kurath, G., Heick, J. A., and Dodds, J. A 1993. RNase protection analyses show high genetic diversity among field isolates of satellite tobacco mosaic virus. Virology 194:414-418.
9. Kurath, G., Rey, M. E. C., and Dodds, J. A. 1992 Analysis of genetic heterogeneity within the type strain of satellite tobacco mosaic virus reveals several variants and a strong bias for G to A substitution mutations. Virology 189:233-244.
10. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of the bacteriophage T4. Nature (London) 227:680-685.
11. Larson, S. B., Koszelak, S., Day, J., Greenwood, A., Dodds, J. A., and McPherson, A. 1993. Double-helical RNA in satellite tobacco mosaic virus. Nature (London) 361:179-182.
12. Larson, S. B., Koszelak, S., Day, J., Greenwood, A., Dodds, J. A., and McPherson, A. 1993. Three-dimensional structure of satellite tobacco mosaic virus at 2.9 Å resolution. J. Mol. Biol. 231:375-391.
13. Maniatis, T., Fritsch, E. F., and Sambrook, J. 1982. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
14. Mirkov, T. E., Mathews, D. M., Du Plessis, D. H., and Dodds, J. A. 1989. Nucleotide sequence and translation of satellite tobacco mosaic virus RNA. Virology 170:139-146.
15. Morris, T. J., and Dodds, J. A. 1979. Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69:854-858.
16. Owens, R. A., and Kaper, J. M. 1977. Cucumber mosaic virus-associated satellite RNA 5. II. In vitro translation in a wheat germ protein-synthesis system. Virology 80:196-203.
17. Routh, G., Dodds, J. A., Fitzmaurice, L., and Mirkov, T. E. 1995. Characterization of deletion and frameshift mutants of satellite tobacco mosaic virus. Virology 212:121-127.
18. Rubino, L., Burgyan, J., Grieco, F., and Russo, M. 1990. Sequence analysis of cymbidium ringspot virus satellite and defective interfering RNAs. J. Gen. Virol. 71:1655-1660.
19. Rubino, L., Tousignant, M. E., Steger, G., and Kaper, J. M. 1990. Nucleotide sequence and structural analysis of two satellite RNAs associated with chicory yellow mottle virus. J. Gen. Virol. 71:1897-1903.
20. Sanger, F., Nicklen, S., and Coulson, A. R. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
21. Valverde, R. A., and Dodds, J. A. 1986. Evidence for a satellite RNA associated naturally with the U5 strain and experimentally with the U1 strain of tobacco mosaic virus. J. Gen. Virol. 67:1875-1884.
22. Valverde, R. A., and Dodds, J. A. 1987. Some properties of isometric virus particles which contain the satellite RNA of tobacco mosaic virus. J. Gen. Virol. 68:965-972.
23. Valverde, R. A., Heick, J. A., and Dodds, J. A. 1991. Interactions between satellite tobacco mosaic virus, helper tobamoviruses, and their hosts. Phytopathology 81:99-104.
24. Winter, E., Yamamoto, F., Almoguera, C., and Perucho, M. 1985. A method to detect and characterize point mutations in transcribed genes: Amplification and over expression of the mutant c-Ki-ras allele in human tumor cells. Proc. Natl. Acad. Sci. USA 82:7575-7579.